RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
CHD7-211ENST00000532149 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
CHD7-211ENST00000532149 FMN2Q9NZ56 1722 aa15.95■□□□□ 0.14
CHD7-211ENST00000532149 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
CHD7-211ENST00000532149 KCNA6P17658 529 aa15.95■□□□□ 0.14
CHD7-211ENST00000532149 PDE3AQ14432 1141 aa15.95■□□□□ 0.14
CHD7-211ENST00000532149 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
CHD7-211ENST00000532149 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
CHD7-211ENST00000532149 NGDNQ8NEJ9 315 aaKnown RBP15.94■□□□□ 0.14
CHD7-211ENST00000532149 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
CHD7-211ENST00000532149 NALCNQ8IZF0 1738 aa15.93■□□□□ 0.14
CHD7-211ENST00000532149 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
CHD7-211ENST00000532149 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
CHD7-211ENST00000532149 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
CHD7-211ENST00000532149 NME9Q86XW9 330 aa15.92■□□□□ 0.14
CHD7-211ENST00000532149 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
CHD7-211ENST00000532149 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
CHD7-211ENST00000532149 IL13P35225 146 aa15.91■□□□□ 0.14
CHD7-211ENST00000532149 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
CHD7-211ENST00000532149 NFE2L2Q16236 605 aa15.88■□□□□ 0.13
CHD7-211ENST00000532149 RIPK4P57078 832 aa15.87■□□□□ 0.13
CHD7-211ENST00000532149 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
CHD7-211ENST00000532149 FLT4P35916 1363 aa15.86■□□□□ 0.13
CHD7-211ENST00000532149 PPM1GO15355 546 aaPredicted RBP15.85■□□□□ 0.13
CHD7-211ENST00000532149 B4GALNT3Q6L9W6 998 aa15.85■□□□□ 0.13
CHD7-211ENST00000532149 PHF8Q9UPP1 1060 aa15.85■□□□□ 0.13
CHD7-211ENST00000532149 RTL1A6NKG5 1358 aa15.85■□□□□ 0.13
CHD7-211ENST00000532149 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
CHD7-211ENST00000532149 PRKAR2BP31323 418 aa15.84■□□□□ 0.13
CHD7-211ENST00000532149 GNAI1P63096 354 aa15.84■□□□□ 0.13
CHD7-211ENST00000532149 NEUROD2Q15784 382 aa15.84■□□□□ 0.13
CHD7-211ENST00000532149 KCNH5Q8NCM2 988 aa15.84■□□□□ 0.13
CHD7-211ENST00000532149 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
CHD7-211ENST00000532149 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
CHD7-211ENST00000532149 DCCP43146 1447 aa15.84■□□□□ 0.13
CHD7-211ENST00000532149 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.12
CHD7-211ENST00000532149 EXOC6Q8TAG9 804 aa15.83■□□□□ 0.12
CHD7-211ENST00000532149 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.12
CHD7-211ENST00000532149 TRIM35Q9UPQ4 493 aa15.83■□□□□ 0.12
CHD7-211ENST00000532149 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
CHD7-211ENST00000532149 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
CHD7-211ENST00000532149 RARSP54136 660 aaKnown RBP15.82■□□□□ 0.12
CHD7-211ENST00000532149 BRPF1P55201 1214 aaPredicted RBP15.82■□□□□ 0.12
CHD7-211ENST00000532149 C19orf44Q9H6X5 657 aa15.82■□□□□ 0.12
CHD7-211ENST00000532149 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
CHD7-211ENST00000532149 NCKAP5LQ9HCH0 1330 aa15.82■□□□□ 0.12
CHD7-211ENST00000532149 RGPD8O14715 1765 aaPredicted RBP15.81■□□□□ 0.12
CHD7-211ENST00000532149 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
CHD7-211ENST00000532149 CENPQQ7L2Z9 268 aaPredicted RBP15.81■□□□□ 0.12
CHD7-211ENST00000532149 KIF1AQ12756 1690 aa15.8■□□□□ 0.12
CHD7-211ENST00000532149 SENP3-EIF4A1A0A087X0R7 540 aa15.8■□□□□ 0.12
CHD7-211ENST00000532149 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
CHD7-211ENST00000532149 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
CHD7-211ENST00000532149 NLRP6P59044 892 aa15.8■□□□□ 0.12
CHD7-211ENST00000532149 PMFBP1Q8TBY8 1022 aa15.8■□□□□ 0.12
CHD7-211ENST00000532149 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
CHD7-211ENST00000532149 MST1RQ04912 1400 aa15.79■□□□□ 0.12
CHD7-211ENST00000532149 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
CHD7-211ENST00000532149 FANCIQ9NVI1 1328 aa15.78■□□□□ 0.12
CHD7-211ENST00000532149 AMPHP49418 695 aa15.78■□□□□ 0.12
CHD7-211ENST00000532149 PSME1Q06323 249 aa15.78■□□□□ 0.12
CHD7-211ENST00000532149 EIF4A2Q14240 407 aaKnown RBP15.78■□□□□ 0.12
CHD7-211ENST00000532149 RRS1Q15050 365 aaKnown RBP15.78■□□□□ 0.12
CHD7-211ENST00000532149 ABTB2Q8N961 1025 aa15.78■□□□□ 0.12
CHD7-211ENST00000532149 CRBNQ96SW2 442 aa15.78■□□□□ 0.12
CHD7-211ENST00000532149 FARP1Q9Y4F1 1045 aaPredicted RBP15.78■□□□□ 0.12
CHD7-211ENST00000532149 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
CHD7-211ENST00000532149 KDRP35968 1356 aa15.77■□□□□ 0.12
CHD7-211ENST00000532149 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
CHD7-211ENST00000532149 PROSER2Q86WR7 435 aaPredicted RBP15.77■□□□□ 0.12
CHD7-211ENST00000532149 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
CHD7-211ENST00000532149 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
CHD7-211ENST00000532149 RGPD1P0DJD0 1748 aa15.77■□□□□ 0.11
CHD7-211ENST00000532149 PHRF1Q9P1Y6 1649 aaKnown RBP15.76■□□□□ 0.11
CHD7-211ENST00000532149 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
CHD7-211ENST00000532149 ZKSCAN2Q63HK3 967 aa15.76■□□□□ 0.11
CHD7-211ENST00000532149 GAS2L2Q8NHY3 880 aa15.76■□□□□ 0.11
CHD7-211ENST00000532149 ARHGAP45Q92619 1136 aa15.76■□□□□ 0.11
CHD7-211ENST00000532149 BABAM1Q9NWV8 329 aa15.76■□□□□ 0.11
CHD7-211ENST00000532149 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
CHD7-211ENST00000532149 SOS1Q07889 1333 aaPredicted RBP15.75■□□□□ 0.11
CHD7-211ENST00000532149 MAP3K19Q56UN5 1328 aa15.75■□□□□ 0.11
CHD7-211ENST00000532149 PLIN1O60240 522 aa15.75■□□□□ 0.11
CHD7-211ENST00000532149 GABBR2O75899 941 aa15.74■□□□□ 0.11
CHD7-211ENST00000532149 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
CHD7-211ENST00000532149 ESCO1Q5FWF5 840 aa15.74■□□□□ 0.11
CHD7-211ENST00000532149 PLEKHG2Q9H7P9 1386 aa15.74■□□□□ 0.11
CHD7-211ENST00000532149 IGSF1Q8N6C5 1336 aa15.73■□□□□ 0.11
CHD7-211ENST00000532149 BCAR3O75815 825 aa15.73■□□□□ 0.11
CHD7-211ENST00000532149 SULT6B1Q6IMI4 303 aa15.73■□□□□ 0.11
CHD7-211ENST00000532149 CADPS2Q86UW7 1296 aa15.73■□□□□ 0.11
CHD7-211ENST00000532149 HMOX1P09601 288 aa15.72■□□□□ 0.11
CHD7-211ENST00000532149 ATF3P18847 181 aa15.72■□□□□ 0.11
CHD7-211ENST00000532149 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
CHD7-211ENST00000532149 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
CHD7-211ENST00000532149 HSP90AB2PQ58FF8 381 aa15.71■□□□□ 0.11
CHD7-211ENST00000532149 IP6K1Q92551 441 aa15.71■□□□□ 0.11
CHD7-211ENST00000532149 PHACTR3Q96KR7 559 aa15.71■□□□□ 0.11
CHD7-211ENST00000532149 KIAA0232Q92628 1395 aa15.71■□□□□ 0.11
CHD7-211ENST00000532149 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms