RNA–Protein interactions for RNA: ENST00000531687.1

THUMPD2-209, Transcript of THUMP domain containing 2, humanhuman

TSL 3

Gene THUMPD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-209ENST00000531687 MYT1Q01538 1121 aa23.48■■□□□ 1.35
THUMPD2-209ENST00000531687 EP400Q96L91 3159 aa23.48■■□□□ 1.35
THUMPD2-209ENST00000531687 PARP4Q9UKK3 1724 aaKnown RBP23.47■■□□□ 1.35
THUMPD2-209ENST00000531687 ZBTB7CA1YPR0 619 aa23.47■■□□□ 1.35
THUMPD2-209ENST00000531687 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
THUMPD2-209ENST00000531687 LARP1Q6PKG0 1096 aaKnown RBP23.47■■□□□ 1.35
THUMPD2-209ENST00000531687 KRT27Q7Z3Y8 459 aa23.47■■□□□ 1.35
THUMPD2-209ENST00000531687 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
THUMPD2-209ENST00000531687 BLMP54132 1417 aaPredicted RBP23.45■■□□□ 1.34
THUMPD2-209ENST00000531687 BARGINQ6ZT62 677 aa23.45■■□□□ 1.34
THUMPD2-209ENST00000531687 SOX12O15370 315 aa23.44■■□□□ 1.34
THUMPD2-209ENST00000531687 CCDC125Q86Z20 511 aa23.44■■□□□ 1.34
THUMPD2-209ENST00000531687 TCP11L2Q8N4U5 519 aa23.43■■□□□ 1.34
THUMPD2-209ENST00000531687 THRAP3Q9Y2W1 955 aaKnown RBP23.43■■□□□ 1.34
THUMPD2-209ENST00000531687 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
THUMPD2-209ENST00000531687 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
THUMPD2-209ENST00000531687 RGPD1P0DJD0 1748 aa23.42■■□□□ 1.34
THUMPD2-209ENST00000531687 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
THUMPD2-209ENST00000531687 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
THUMPD2-209ENST00000531687 FAM208AQ9UK61 1670 aaKnown RBP23.4■■□□□ 1.34
THUMPD2-209ENST00000531687 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.33
THUMPD2-209ENST00000531687 COG3Q96JB2 828 aa23.38■■□□□ 1.33
THUMPD2-209ENST00000531687 TNS1Q9HBL0 1735 aaKnown RBP23.37■■□□□ 1.33
THUMPD2-209ENST00000531687 TOM1L2Q6ZVM7 507 aa23.36■■□□□ 1.33
THUMPD2-209ENST00000531687 NSD3Q9BZ95 1437 aa23.35■■□□□ 1.33
THUMPD2-209ENST00000531687 ERBB3P21860 1342 aa23.34■■□□□ 1.33
THUMPD2-209ENST00000531687 CCDC7Q96M83 1385 aa23.33■■□□□ 1.33
THUMPD2-209ENST00000531687 PEAK1Q9H792 1746 aa23.33■■□□□ 1.32
THUMPD2-209ENST00000531687 DISP2A7MBM2 1401 aa23.33■■□□□ 1.32
THUMPD2-209ENST00000531687 FYB1O15117 783 aa23.32■■□□□ 1.32
THUMPD2-209ENST00000531687 CSB-PGBD3P0DP91 1061 aa23.32■■□□□ 1.32
THUMPD2-209ENST00000531687 CARD10Q9BWT7 1032 aa23.32■■□□□ 1.32
THUMPD2-209ENST00000531687 ANKRD26Q9UPS8 1709 aa23.32■■□□□ 1.32
THUMPD2-209ENST00000531687 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
THUMPD2-209ENST00000531687 POLR3GLQ9BT43 218 aa23.31■■□□□ 1.32
THUMPD2-209ENST00000531687 SF3B2Q13435 895 aaKnown RBP23.3■■□□□ 1.32
THUMPD2-209ENST00000531687 CDCA7Q9BWT1 371 aaPredicted RBP23.3■■□□□ 1.32
THUMPD2-209ENST00000531687 PDE3BQ13370 1112 aa23.29■■□□□ 1.32
THUMPD2-209ENST00000531687 FAM182BQ5T319 152 aa23.29■■□□□ 1.32
THUMPD2-209ENST00000531687 CARD14Q9BXL6 1004 aa23.29■■□□□ 1.32
THUMPD2-209ENST00000531687 GGNBP2Q9H3C7 697 aa23.29■■□□□ 1.32
THUMPD2-209ENST00000531687 FAM196AQ6ZSG2 479 aa23.28■■□□□ 1.32
THUMPD2-209ENST00000531687 IP6K1Q92551 441 aa23.28■■□□□ 1.32
THUMPD2-209ENST00000531687 MAP3K19Q56UN5 1328 aa23.28■■□□□ 1.32
THUMPD2-209ENST00000531687 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
THUMPD2-209ENST00000531687 TNS2Q63HR2 1409 aa23.26■■□□□ 1.31
THUMPD2-209ENST00000531687 ANKRD24Q8TF21 1146 aa23.26■■□□□ 1.31
THUMPD2-209ENST00000531687 CGNL1Q0VF96 1302 aa23.25■■□□□ 1.31
THUMPD2-209ENST00000531687 SBF2Q86WG5 1849 aa23.24■■□□□ 1.31
THUMPD2-209ENST00000531687 C11orf95C9JLR9 678 aaPredicted RBP23.24■■□□□ 1.31
THUMPD2-209ENST00000531687 DDB1Q16531 1140 aa23.24■■□□□ 1.31
THUMPD2-209ENST00000531687 KIF24Q5T7B8 1368 aa23.24■■□□□ 1.31
THUMPD2-209ENST00000531687 HOXC9P31274 260 aa23.23■■□□□ 1.31
THUMPD2-209ENST00000531687 BAG6P46379 1132 aa23.23■■□□□ 1.31
THUMPD2-209ENST00000531687 DEFB132Q7Z7B7 95 aa23.22■■□□□ 1.31
THUMPD2-209ENST00000531687 NLRP2Q9NX02 1062 aa23.22■■□□□ 1.31
THUMPD2-209ENST00000531687 RGPD2P0DJD1 1756 aa23.22■■□□□ 1.31
THUMPD2-209ENST00000531687 AMPHP49418 695 aa23.21■■□□□ 1.31
THUMPD2-209ENST00000531687 BCL9O00512 1426 aa23.21■■□□□ 1.31
THUMPD2-209ENST00000531687 FLT4P35916 1363 aa23.2■■□□□ 1.3
THUMPD2-209ENST00000531687 FBLN1P23142 703 aa23.2■■□□□ 1.3
THUMPD2-209ENST00000531687 RRS1Q15050 365 aaKnown RBP23.2■■□□□ 1.3
THUMPD2-209ENST00000531687 RGPD3A6NKT7 1758 aaPredicted RBP23.19■■□□□ 1.3
THUMPD2-209ENST00000531687 RGPD4Q7Z3J3 1758 aa23.19■■□□□ 1.3
THUMPD2-209ENST00000531687 RREB1Q92766 1687 aa23.19■■□□□ 1.3
THUMPD2-209ENST00000531687 SMG6Q86US8 1419 aaKnown RBP23.19■■□□□ 1.3
THUMPD2-209ENST00000531687 TRIM37O94972 964 aa23.18■■□□□ 1.3
THUMPD2-209ENST00000531687 NSD2O96028 1365 aa23.17■■□□□ 1.3
THUMPD2-209ENST00000531687 INSRP06213 1382 aa23.16■■□□□ 1.3
THUMPD2-209ENST00000531687 PARD3Q8TEW0 1356 aa23.16■■□□□ 1.3
THUMPD2-209ENST00000531687 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
THUMPD2-209ENST00000531687 IL2RBP14784 551 aa23.16■■□□□ 1.3
THUMPD2-209ENST00000531687 PANK3Q9H999 370 aa23.16■■□□□ 1.3
THUMPD2-209ENST00000531687 MAP2P11137 1827 aaKnown RBP23.16■■□□□ 1.3
THUMPD2-209ENST00000531687 LTV1Q96GA3 475 aaPredicted RBP23.15■■□□□ 1.3
THUMPD2-209ENST00000531687 NHSQ6T4R5 1651 aa23.15■■□□□ 1.3
THUMPD2-209ENST00000531687 EXOC5O00471 708 aa23.14■■□□□ 1.29
THUMPD2-209ENST00000531687 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
THUMPD2-209ENST00000531687 MARCH10Q8NA82 808 aaPredicted RBP23.14■■□□□ 1.29
THUMPD2-209ENST00000531687 SHANK3Q9BYB0 1731 aa23.13■■□□□ 1.29
THUMPD2-209ENST00000531687 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
THUMPD2-209ENST00000531687 EN1Q05925 392 aaPredicted RBP23.12■■□□□ 1.29
THUMPD2-209ENST00000531687 EMILIN1Q9Y6C2 1016 aa23.11■■□□□ 1.29
THUMPD2-209ENST00000531687 MEGF6O75095 1541 aa23.1■■□□□ 1.29
THUMPD2-209ENST00000531687 APBA3O96018 575 aa23.09■■□□□ 1.29
THUMPD2-209ENST00000531687 HSP90AB2PQ58FF8 381 aa23.08■■□□□ 1.29
THUMPD2-209ENST00000531687 CAMKK2Q96RR4 588 aa23.08■■□□□ 1.29
THUMPD2-209ENST00000531687 NCAPD2Q15021 1401 aa23.08■■□□□ 1.28
THUMPD2-209ENST00000531687 EZH2Q15910 746 aaKnown RBP23.06■■□□□ 1.28
THUMPD2-209ENST00000531687 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
THUMPD2-209ENST00000531687 WASHC2AQ641Q2 1341 aa23.06■■□□□ 1.28
THUMPD2-209ENST00000531687 NBPF6Q5VWK0 638 aa23.05■■□□□ 1.28
THUMPD2-209ENST00000531687 NBPF4Q96M43 638 aa23.05■■□□□ 1.28
THUMPD2-209ENST00000531687 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
THUMPD2-209ENST00000531687 POLKQ9UBT6 870 aa23.04■■□□□ 1.28
THUMPD2-209ENST00000531687 PKD1L3Q7Z443 1732 aa23.04■■□□□ 1.28
THUMPD2-209ENST00000531687 DOT1LQ8TEK3 1739 aa23.03■■□□□ 1.28
THUMPD2-209ENST00000531687 PPM1GO15355 546 aaPredicted RBP23.02■■□□□ 1.28
THUMPD2-209ENST00000531687 BTAF1O14981 1849 aa23.02■■□□□ 1.28
THUMPD2-209ENST00000531687 USHBP1Q8N6Y0 703 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms