RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-208ENST00000529970 PTGER2P43116 358 aa5.92□□□□□ -1.46
ARHGEF12-208ENST00000529970 TOM1L2Q6ZVM7 507 aa5.92□□□□□ -1.46
ARHGEF12-208ENST00000529970 CSB-PGBD3P0DP91 1061 aa5.91□□□□□ -1.46
ARHGEF12-208ENST00000529970 YTHDC1Q96MU7 727 aaKnown RBP5.91□□□□□ -1.46
ARHGEF12-208ENST00000529970 C14orf93Q9H972 538 aaKnown RBP5.91□□□□□ -1.46
ARHGEF12-208ENST00000529970 LARP1Q6PKG0 1096 aaKnown RBP5.91□□□□□ -1.46
ARHGEF12-208ENST00000529970 WASLO00401 505 aaPredicted RBP5.91□□□□□ -1.46
ARHGEF12-208ENST00000529970 ABTB2Q8N961 1025 aa5.91□□□□□ -1.46
ARHGEF12-208ENST00000529970 EXOC5O00471 708 aa5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 ANO8Q9HCE9 1232 aaPredicted RBP5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 BRD4O60885 1362 aaPredicted RBP5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 CPDO75976 1380 aa5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 MINK1Q8N4C8 1332 aaPredicted RBP5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 CRB1P82279 1406 aa5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 ABCA3Q99758 1704 aa5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 IGSF3O75054 1194 aa5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 STAC3Q96MF2 364 aa5.9□□□□□ -1.46
ARHGEF12-208ENST00000529970 C16orf71Q8IYS4 520 aaPredicted RBP5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 TNS4Q8IZW8 715 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 TULP4Q9NRJ4 1543 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 PIK3C2GO75747 1445 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 CHD4Q14839 1912 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 RGPD3A6NKT7 1758 aaPredicted RBP5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 RGPD4Q7Z3J3 1758 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 ZNF316A6NFI3 1004 aaPredicted RBP5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 ATP10DQ9P241 1426 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 IFT172Q9UG01 1749 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 PPLO60437 1756 aa5.89□□□□□ -1.47
ARHGEF12-208ENST00000529970 BCL9O00512 1426 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 CAMTA1Q9Y6Y1 1673 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 MSH5O43196 834 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 NUDT16Q96DE0 195 aaKnown RBP5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 CHMP4AQ9BY43 222 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 MYOM1P52179 1685 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 CAPN15O75808 1086 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 SLC27A3Q5K4L6 730 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 NUTM2GQ5VZR2 741 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 CCDC7Q96M83 1385 aa5.88□□□□□ -1.47
ARHGEF12-208ENST00000529970 NEUROD1Q13562 356 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 HIRIP3Q9BW71 556 aaPredicted RBP5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 TRAK1Q9UPV9 953 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 PRELPP51888 382 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 CFAP70Q5T0N1 1121 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 TFCP2L1Q9NZI6 479 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 CCDC61Q9Y6R9 512 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 GCP02774 474 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 KCNH5Q8NCM2 988 aa5.87□□□□□ -1.47
ARHGEF12-208ENST00000529970 FLAD1Q8NFF5 587 aa5.86□□□□□ -1.47
ARHGEF12-208ENST00000529970 SGIP1Q9BQI5 828 aa5.86□□□□□ -1.47
ARHGEF12-208ENST00000529970 ALS2Q96Q42 1657 aa5.86□□□□□ -1.47
ARHGEF12-208ENST00000529970 CASZ1Q86V15 1759 aa5.86□□□□□ -1.47
ARHGEF12-208ENST00000529970 USP19O94966 1318 aa5.86□□□□□ -1.47
ARHGEF12-208ENST00000529970 WDR17Q8IZU2 1322 aa5.86□□□□□ -1.47
ARHGEF12-208ENST00000529970 ZNF526Q8TF50 670 aaPredicted RBP5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 CARD10Q9BWT7 1032 aa5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 PCDH10Q9P2E7 1040 aa5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 CD2APQ9Y5K6 639 aa5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 TRPM3Q9HCF6 1732 aaPredicted RBP5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 SPATA31E1Q6ZUB1 1445 aa5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 NLRP6P59044 892 aa5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 COL5A2P05997 1499 aaPredicted RBP5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 ACEP12821 1306 aa5.85□□□□□ -1.47
ARHGEF12-208ENST00000529970 PARP4Q9UKK3 1724 aaKnown RBP5.84□□□□□ -1.47
ARHGEF12-208ENST00000529970 PLEKHG3A1L390 1219 aa5.84□□□□□ -1.47
ARHGEF12-208ENST00000529970 MARCH10Q8NA82 808 aaPredicted RBP5.84□□□□□ -1.47
ARHGEF12-208ENST00000529970 PRR36Q9H6K5 1346 aa5.84□□□□□ -1.47
ARHGEF12-208ENST00000529970 TOMM70O94826 608 aa5.84□□□□□ -1.47
ARHGEF12-208ENST00000529970 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.84□□□□□ -1.47
ARHGEF12-208ENST00000529970 POLR3AO14802 1390 aaPredicted RBP5.84□□□□□ -1.47
ARHGEF12-208ENST00000529970 SRPK2P78362 688 aaKnown RBP5.84□□□□□ -1.48
ARHGEF12-208ENST00000529970 DHX37Q8IY37 1157 aaKnown RBP5.84□□□□□ -1.48
ARHGEF12-208ENST00000529970 CDK19Q9BWU1 502 aa5.84□□□□□ -1.48
ARHGEF12-208ENST00000529970 PDGFDQ9GZP0 370 aaPredicted RBP5.84□□□□□ -1.48
ARHGEF12-208ENST00000529970 ITSN1Q15811 1721 aa5.83□□□□□ -1.48
ARHGEF12-208ENST00000529970 PROM2Q8N271 834 aa5.83□□□□□ -1.48
ARHGEF12-208ENST00000529970 MPHOSPH9Q99550 1183 aa5.83□□□□□ -1.48
ARHGEF12-208ENST00000529970 USP6P35125 1406 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 FSTL1Q12841 308 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 PHRF1Q9P1Y6 1649 aaKnown RBP5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 WWC3Q9ULE0 1092 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 TNS2Q63HR2 1409 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 NSD3Q9BZ95 1437 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 IL2RBP14784 551 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 RBM46Q8TBY0 533 aaKnown RBP5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 ACSBG1Q96GR2 724 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 NLRP2Q9NX02 1062 aa5.82□□□□□ -1.48
ARHGEF12-208ENST00000529970 KLRG1Q96E93 195 aa5.81□□□□□ -1.48
ARHGEF12-208ENST00000529970 NLGN2Q8NFZ4 835 aa5.81□□□□□ -1.48
ARHGEF12-208ENST00000529970 ZNF692Q9BU19 519 aaPredicted RBP5.81□□□□□ -1.48
ARHGEF12-208ENST00000529970 TOPAZ1Q8N9V7 1692 aa5.81□□□□□ -1.48
ARHGEF12-208ENST00000529970 KDM2BQ8NHM5 1336 aa5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 SAMD1Q6SPF0 538 aaPredicted RBP5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 RGPD8O14715 1765 aaPredicted RBP5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 YBX3P16989 372 aaKnown RBP eCLIP5.8□□□□□ -1.481e-6■□□□□ 10
ARHGEF12-208ENST00000529970 ZNF827Q17R98 1081 aa5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 PPIP5K1Q6PFW1 1433 aa5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 MIER1Q8N108 512 aa5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 AKT1S1Q96B36 256 aa5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 SHANK3Q9BYB0 1731 aa5.8□□□□□ -1.48
ARHGEF12-208ENST00000529970 SLC34A2O95436 690 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms