RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 FLT4P35916 1363 aa10.78□□□□□ -0.68
SORL1-207ENST00000528339 CASZ1Q86V15 1759 aa10.78□□□□□ -0.68
SORL1-207ENST00000528339 HDGFL2Q7Z4V5 671 aaPredicted RBP10.78□□□□□ -0.68
SORL1-207ENST00000528339 TRMT2AQ8IZ69 625 aaKnown RBP10.78□□□□□ -0.68
SORL1-207ENST00000528339 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.68
SORL1-207ENST00000528339 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.69
SORL1-207ENST00000528339 TAF1LQ8IZX4 1826 aa10.77□□□□□ -0.69
SORL1-207ENST00000528339 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
SORL1-207ENST00000528339 ARHGEF25Q86VW2 580 aa10.76□□□□□ -0.69
SORL1-207ENST00000528339 BCL9O00512 1426 aa10.76□□□□□ -0.69
SORL1-207ENST00000528339 KNSTRNQ9Y448 316 aa10.74□□□□□ -0.69
SORL1-207ENST00000528339 BCL9LQ86UU0 1499 aa10.74□□□□□ -0.69
SORL1-207ENST00000528339 MAP3K19Q56UN5 1328 aa10.73□□□□□ -0.69
SORL1-207ENST00000528339 CCDC27Q2M243 656 aa10.73□□□□□ -0.69
SORL1-207ENST00000528339 BCORQ6W2J9 1755 aa10.73□□□□□ -0.69
SORL1-207ENST00000528339 RBM33Q96EV2 1170 aaKnown RBP10.72□□□□□ -0.69
SORL1-207ENST00000528339 MEGF6O75095 1541 aa10.72□□□□□ -0.69
SORL1-207ENST00000528339 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
SORL1-207ENST00000528339 RSPH6AQ9H0K4 717 aa10.72□□□□□ -0.69
SORL1-207ENST00000528339 CRB1P82279 1406 aa10.71□□□□□ -0.69
SORL1-207ENST00000528339 RNF123Q5XPI4 1314 aa10.71□□□□□ -0.69
SORL1-207ENST00000528339 ANP32CO43423 234 aa10.71□□□□□ -0.69
SORL1-207ENST00000528339 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.69
SORL1-207ENST00000528339 KRT28Q7Z3Y7 464 aa10.71□□□□□ -0.69
SORL1-207ENST00000528339 ATRNO75882 1429 aa10.71□□□□□ -0.7
SORL1-207ENST00000528339 KCPQ6ZWJ8 1503 aa10.71□□□□□ -0.7
SORL1-207ENST00000528339 CEMIPQ8WUJ3 1361 aa10.71□□□□□ -0.7
SORL1-207ENST00000528339 HOXC9P31274 260 aa10.7□□□□□ -0.7
SORL1-207ENST00000528339 IP6K1Q92551 441 aa10.7□□□□□ -0.7
SORL1-207ENST00000528339 ZBED9Q6R2W3 1325 aa10.69□□□□□ -0.7
SORL1-207ENST00000528339 GGNBP2Q9H3C7 697 aa10.69□□□□□ -0.7
SORL1-207ENST00000528339 ATF3P18847 181 aa10.69□□□□□ -0.7
SORL1-207ENST00000528339 TUBGCP6Q96RT7 1819 aa10.69□□□□□ -0.7
SORL1-207ENST00000528339 PMFBP1Q8TBY8 1022 aa10.69□□□□□ -0.7
SORL1-207ENST00000528339 ANKRD36CQ5JPF3 1778 aa10.69□□□□□ -0.7
SORL1-207ENST00000528339 TNS2Q63HR2 1409 aa10.68□□□□□ -0.7
SORL1-207ENST00000528339 HEG1Q9ULI3 1381 aa10.68□□□□□ -0.7
SORL1-207ENST00000528339 KCNH5Q8NCM2 988 aa10.68□□□□□ -0.7
SORL1-207ENST00000528339 MTHFSP49914 203 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 EIF4A2Q14240 407 aaKnown RBP10.67□□□□□ -0.7
SORL1-207ENST00000528339 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 BTAF1O14981 1849 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 LAMB2P55268 1798 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 NGEFQ8N5V2 710 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 ERBB3P21860 1342 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 PSME1Q06323 249 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 CC2D1BQ5T0F9 858 aaKnown RBP10.67□□□□□ -0.7
SORL1-207ENST00000528339 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
SORL1-207ENST00000528339 GCP02774 474 aa10.66□□□□□ -0.7
SORL1-207ENST00000528339 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
SORL1-207ENST00000528339 JCADQ9P266 1359 aa10.66□□□□□ -0.7
SORL1-207ENST00000528339 COG3Q96JB2 828 aa10.65□□□□□ -0.7
SORL1-207ENST00000528339 KDM6AO15550 1401 aaPredicted RBP10.65□□□□□ -0.7
SORL1-207ENST00000528339 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.71
SORL1-207ENST00000528339 MORC1Q86VD1 984 aa10.65□□□□□ -0.71
SORL1-207ENST00000528339 DDX17Q92841 729 aaKnown RBP10.65□□□□□ -0.71
SORL1-207ENST00000528339 SENP3Q9H4L4 574 aaPredicted RBP10.65□□□□□ -0.71
SORL1-207ENST00000528339 KIAA0232Q92628 1395 aa10.64□□□□□ -0.71
SORL1-207ENST00000528339 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
SORL1-207ENST00000528339 TMC1Q8TDI8 760 aa10.64□□□□□ -0.71
SORL1-207ENST00000528339 ARFGEF2Q9Y6D5 1785 aa10.64□□□□□ -0.71
SORL1-207ENST00000528339 ADAMTS8Q9UP79 889 aa10.64□□□□□ -0.71
SORL1-207ENST00000528339 FOXO3O43524 673 aa10.63□□□□□ -0.71
SORL1-207ENST00000528339 ZNF853P0CG23 659 aa10.63□□□□□ -0.71
SORL1-207ENST00000528339 BCANQ96GW7 911 aa10.63□□□□□ -0.71
SORL1-207ENST00000528339 SCN7AQ01118 1682 aa10.63□□□□□ -0.71
SORL1-207ENST00000528339 C4AP0C0L4 1744 aa10.63□□□□□ -0.71
SORL1-207ENST00000528339 C4BP0C0L5 1744 aa10.63□□□□□ -0.71
SORL1-207ENST00000528339 TRIM35Q9UPQ4 493 aa10.63□□□□□ -0.71
SORL1-207ENST00000528339 FCHSD2O94868 740 aa10.62□□□□□ -0.71
SORL1-207ENST00000528339 IL16Q14005 1332 aa10.62□□□□□ -0.71
SORL1-207ENST00000528339 FNBP4Q8N3X1 1017 aaPredicted RBP10.62□□□□□ -0.71
SORL1-207ENST00000528339 FBLN1P23142 703 aa10.61□□□□□ -0.71
SORL1-207ENST00000528339 A0A1B0GUL6 1792 aa10.61□□□□□ -0.71
SORL1-207ENST00000528339 NGDNQ8NEJ9 315 aaKnown RBP10.61□□□□□ -0.71
SORL1-207ENST00000528339 WDR17Q8IZU2 1322 aa10.61□□□□□ -0.71
SORL1-207ENST00000528339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.6□□□□□ -0.71
SORL1-207ENST00000528339 ONECUT3O60422 494 aaPredicted RBP10.6□□□□□ -0.71
SORL1-207ENST00000528339 HSP90AB2PQ58FF8 381 aa10.6□□□□□ -0.71
SORL1-207ENST00000528339 LRRC59Q96AG4 307 aaKnown RBP10.6□□□□□ -0.71
SORL1-207ENST00000528339 UBR3Q6ZT12 1888 aa10.59□□□□□ -0.71
SORL1-207ENST00000528339 ABTB2Q8N961 1025 aa10.59□□□□□ -0.71
SORL1-207ENST00000528339 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
SORL1-207ENST00000528339 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
SORL1-207ENST00000528339 EYA1Q99502 592 aa10.59□□□□□ -0.71
SORL1-207ENST00000528339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.713e-18■□□□□ 11.1
SORL1-207ENST00000528339 NRXN2Q9P2S2 1712 aa10.58□□□□□ -0.72
SORL1-207ENST00000528339 TOM1O60784 492 aa10.58□□□□□ -0.72
SORL1-207ENST00000528339 FAM83GA6ND36 823 aa10.57□□□□□ -0.72
SORL1-207ENST00000528339 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
SORL1-207ENST00000528339 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
SORL1-207ENST00000528339 HTATSF1O43719 755 aaKnown RBP10.57□□□□□ -0.72
SORL1-207ENST00000528339 MRS2Q9HD23 443 aa10.57□□□□□ -0.72
SORL1-207ENST00000528339 RGS12O14924 1447 aa10.57□□□□□ -0.72
SORL1-207ENST00000528339 NLRP6P59044 892 aa10.57□□□□□ -0.72
SORL1-207ENST00000528339 NBPF6Q5VWK0 638 aa10.56□□□□□ -0.72
SORL1-207ENST00000528339 NBPF4Q96M43 638 aa10.56□□□□□ -0.72
SORL1-207ENST00000528339 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
SORL1-207ENST00000528339 BRPF1P55201 1214 aaPredicted RBP10.56□□□□□ -0.72
SORL1-207ENST00000528339 PHACTR3Q96KR7 559 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms