RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 PPIP5K1Q6PFW1 1433 aa9.36□□□□□ -0.91
C11orf54-207ENST00000528288 VIRMAQ69YN4 1812 aaKnown RBP9.36□□□□□ -0.91
C11orf54-207ENST00000528288 RIMS2Q9UQ26 1411 aa9.36□□□□□ -0.91
C11orf54-207ENST00000528288 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
C11orf54-207ENST00000528288 ESF1Q9H501 851 aaKnown RBP9.36□□□□□ -0.91
C11orf54-207ENST00000528288 RICTORQ6R327 1708 aa9.36□□□□□ -0.91
C11orf54-207ENST00000528288 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
C11orf54-207ENST00000528288 HSCBQ8IWL3 235 aa9.35□□□□□ -0.91
C11orf54-207ENST00000528288 ALDH1L2Q3SY69 923 aa9.35□□□□□ -0.91
C11orf54-207ENST00000528288 FAM135BQ49AJ0 1406 aa9.35□□□□□ -0.91
C11orf54-207ENST00000528288 GNAI1P63096 354 aa9.35□□□□□ -0.91
C11orf54-207ENST00000528288 OTUD7AQ8TE49 926 aaPredicted RBP9.34□□□□□ -0.91
C11orf54-207ENST00000528288 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
C11orf54-207ENST00000528288 MCM4P33991 863 aa9.34□□□□□ -0.91
C11orf54-207ENST00000528288 HSP90AB2PQ58FF8 381 aa9.34□□□□□ -0.91
C11orf54-207ENST00000528288 PRR36Q9H6K5 1346 aa9.34□□□□□ -0.91
C11orf54-207ENST00000528288 FOXO3O43524 673 aa9.34□□□□□ -0.91
C11orf54-207ENST00000528288 PLEKHG5O94827 1062 aa9.34□□□□□ -0.91
C11orf54-207ENST00000528288 SLC26A8Q96RN1 970 aa9.34□□□□□ -0.91
C11orf54-207ENST00000528288 MAP2P11137 1827 aaKnown RBP9.34□□□□□ -0.91
C11orf54-207ENST00000528288 PANK2Q9BZ23 570 aa9.33□□□□□ -0.92
C11orf54-207ENST00000528288 A2ML1A8K2U0 1454 aa9.33□□□□□ -0.92
C11orf54-207ENST00000528288 HSP90AB1P08238 724 aaKnown RBP9.33□□□□□ -0.92
C11orf54-207ENST00000528288 NCBP3Q53F19 620 aaKnown RBP9.33□□□□□ -0.92
C11orf54-207ENST00000528288 TBC1D9Q6ZT07 1266 aa9.33□□□□□ -0.92
C11orf54-207ENST00000528288 NECTIN2Q92692 538 aa9.33□□□□□ -0.92
C11orf54-207ENST00000528288 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
C11orf54-207ENST00000528288 CPS1P31327 1500 aa9.33□□□□□ -0.92
C11orf54-207ENST00000528288 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
C11orf54-207ENST00000528288 CEBPAP49715 358 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-207ENST00000528288 IFT57Q9NWB7 429 aa9.33□□□□□ -0.92
C11orf54-207ENST00000528288 EIF4A2Q14240 407 aaKnown RBP9.32□□□□□ -0.92
C11orf54-207ENST00000528288 NUTM2GQ5VZR2 741 aa9.32□□□□□ -0.92
C11orf54-207ENST00000528288 CHMP5Q9NZZ3 219 aa9.32□□□□□ -0.92
C11orf54-207ENST00000528288 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
C11orf54-207ENST00000528288 TRAK2O60296 914 aa9.31□□□□□ -0.92
C11orf54-207ENST00000528288 ZNF853P0CG23 659 aa9.31□□□□□ -0.92
C11orf54-207ENST00000528288 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
C11orf54-207ENST00000528288 F6X3S4 739 aa9.31□□□□□ -0.92
C11orf54-207ENST00000528288 CLTCQ00610 1675 aaKnown RBP9.31□□□□□ -0.92
C11orf54-207ENST00000528288 MED14O60244 1454 aa9.3□□□□□ -0.92
C11orf54-207ENST00000528288 EIF5BO60841 1220 aaKnown RBP9.3□□□□□ -0.92
C11orf54-207ENST00000528288 GSPT1P15170 499 aaKnown RBP9.3□□□□□ -0.92
C11orf54-207ENST00000528288 KIF2CQ99661 725 aa9.3□□□□□ -0.92
C11orf54-207ENST00000528288 ACEP12821 1306 aa9.3□□□□□ -0.92
C11orf54-207ENST00000528288 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
C11orf54-207ENST00000528288 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
C11orf54-207ENST00000528288 BMP2KLQ5H9B9 411 aa9.3□□□□□ -0.92
C11orf54-207ENST00000528288 TSHZ3Q63HK5 1081 aa9.3□□□□□ -0.92
C11orf54-207ENST00000528288 KIF20BQ96Q89 1820 aa9.29□□□□□ -0.92
C11orf54-207ENST00000528288 ABCC4O15439 1325 aa9.29□□□□□ -0.92
C11orf54-207ENST00000528288 MEIS3Q99687 375 aa9.29□□□□□ -0.92
C11orf54-207ENST00000528288 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
C11orf54-207ENST00000528288 G2E3Q7L622 706 aa9.29□□□□□ -0.92
C11orf54-207ENST00000528288 TNPO1Q92973 898 aaKnown RBP9.29□□□□□ -0.92
C11orf54-207ENST00000528288 GCC1Q96CN9 775 aa9.29□□□□□ -0.92
C11orf54-207ENST00000528288 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
C11orf54-207ENST00000528288 EDC4Q6P2E9 1401 aaKnown RBP9.29□□□□□ -0.92
C11orf54-207ENST00000528288 ROBO2Q9HCK4 1378 aa9.29□□□□□ -0.92
C11orf54-207ENST00000528288 ZMYM3Q14202 1370 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 GOLGA6L3A6NEY3 463 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 LTKP29376 864 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 PLEKHM2Q8IWE5 1019 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 LTV1Q96GA3 475 aaPredicted RBP9.28□□□□□ -0.92
C11orf54-207ENST00000528288 ANKRD26Q9UPS8 1709 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 RBM25P49756 843 aaKnown RBP9.28□□□□□ -0.92
C11orf54-207ENST00000528288 API5Q9BZZ5 524 aaKnown RBP9.28□□□□□ -0.92
C11orf54-207ENST00000528288 TTC21BQ7Z4L5 1316 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
C11orf54-207ENST00000528288 ATP7BP35670 1465 aa9.28□□□□□ -0.92
C11orf54-207ENST00000528288 ARHGAP45Q92619 1136 aa9.27□□□□□ -0.92
C11orf54-207ENST00000528288 RBM33Q96EV2 1170 aaKnown RBP9.27□□□□□ -0.92
C11orf54-207ENST00000528288 SSFA2P28290 1259 aa9.27□□□□□ -0.93
C11orf54-207ENST00000528288 LMOD3Q0VAK6 560 aa9.27□□□□□ -0.93
C11orf54-207ENST00000528288 CHAMP1Q96JM3 812 aa9.26□□□□□ -0.93
C11orf54-207ENST00000528288 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-207ENST00000528288 PTCH1Q13635 1447 aa9.26□□□□□ -0.93
C11orf54-207ENST00000528288 ZBTB7CA1YPR0 619 aa9.26□□□□□ -0.93
C11orf54-207ENST00000528288 CDC45O75419 566 aa9.26□□□□□ -0.93
C11orf54-207ENST00000528288 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
C11orf54-207ENST00000528288 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-207ENST00000528288 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
C11orf54-207ENST00000528288 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-207ENST00000528288 ZNF428Q96B54 188 aa9.26□□□□□ -0.93
C11orf54-207ENST00000528288 MSH6P52701 1360 aa9.26□□□□□ -0.93
C11orf54-207ENST00000528288 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
C11orf54-207ENST00000528288 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
C11orf54-207ENST00000528288 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
C11orf54-207ENST00000528288 CEP85Q6P2H3 762 aa9.25□□□□□ -0.93
C11orf54-207ENST00000528288 NGDNQ8NEJ9 315 aaKnown RBP9.25□□□□□ -0.93
C11orf54-207ENST00000528288 DCTPP1Q9H773 170 aa9.25□□□□□ -0.93
C11orf54-207ENST00000528288 CDK12Q9NYV4 1490 aaPredicted RBP9.25□□□□□ -0.93
C11orf54-207ENST00000528288 CHL1O00533 1208 aa9.25□□□□□ -0.93
C11orf54-207ENST00000528288 EXOC6BQ9Y2D4 811 aa9.25□□□□□ -0.93
C11orf54-207ENST00000528288 DLG5Q8TDM6 1919 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 RIMBP3CA6NJZ7 1639 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 RIMBP3BA6NNM3 1639 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 RIMBP3Q9UFD9 1639 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms