RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CHRNA2Q15822 529 aa8.91□□□□□ -0.98
CD44-214ENST00000525211 SPDYE1Q8NFV5 336 aaPredicted RBP8.91□□□□□ -0.98
CD44-214ENST00000525211 COL22A1Q8NFW1 1626 aaPredicted RBP8.91□□□□□ -0.98
CD44-214ENST00000525211 SLIT3O75094 1523 aa8.9□□□□□ -0.98
CD44-214ENST00000525211 NFAT5O94916 1531 aa8.9□□□□□ -0.98
CD44-214ENST00000525211 FAM83GA6ND36 823 aa8.9□□□□□ -0.98
CD44-214ENST00000525211 ADAMTS2O95450 1211 aa8.9□□□□□ -0.98
CD44-214ENST00000525211 RRS1Q15050 365 aaKnown RBP8.9□□□□□ -0.98
CD44-214ENST00000525211 KNSTRNQ9Y448 316 aa8.9□□□□□ -0.98
CD44-214ENST00000525211 SHPRHQ149N8 1683 aa8.9□□□□□ -0.98
CD44-214ENST00000525211 PHRF1Q9P1Y6 1649 aaKnown RBP8.9□□□□□ -0.99
CD44-214ENST00000525211 KIF20BQ96Q89 1820 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 ARHGEF10O15013 1369 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
CD44-214ENST00000525211 CGNL1Q0VF96 1302 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 USP54Q70EL1 1684 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 CCDC184Q52MB2 194 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 NLRP13Q86W25 1043 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
CD44-214ENST00000525211 AXIN2Q9Y2T1 843 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 EMILIN1Q9Y6C2 1016 aa8.89□□□□□ -0.99
CD44-214ENST00000525211 PEAK1Q9H792 1746 aa8.88□□□□□ -0.99
CD44-214ENST00000525211 KIAA0232Q92628 1395 aa8.88□□□□□ -0.99
CD44-214ENST00000525211 MAP3K19Q56UN5 1328 aa8.88□□□□□ -0.99
CD44-214ENST00000525211 ZBTB7CA1YPR0 619 aa8.88□□□□□ -0.99
CD44-214ENST00000525211 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
CD44-214ENST00000525211 COG3Q96JB2 828 aa8.88□□□□□ -0.99
CD44-214ENST00000525211 POLKQ9UBT6 870 aa8.88□□□□□ -0.99
CD44-214ENST00000525211 ZBTB47Q9UFB7 747 aaPredicted RBP8.88□□□□□ -0.99
CD44-214ENST00000525211 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
CD44-214ENST00000525211 MORC1Q86VD1 984 aa8.87□□□□□ -0.99
CD44-214ENST00000525211 CLEC11AQ9Y240 323 aa8.87□□□□□ -0.99
CD44-214ENST00000525211 NPC1L1Q9UHC9 1359 aa8.86□□□□□ -0.99
CD44-214ENST00000525211 COL18A1P39060 1754 aa8.86□□□□□ -0.99
CD44-214ENST00000525211 ANKRD26Q9UPS8 1709 aa8.86□□□□□ -0.99
CD44-214ENST00000525211 RGS17Q9UGC6 210 aaPredicted RBP8.86□□□□□ -0.99
CD44-214ENST00000525211 PARD3Q8TEW0 1356 aa8.86□□□□□ -0.99
CD44-214ENST00000525211 CAMTA1Q9Y6Y1 1673 aa8.85□□□□□ -0.99
CD44-214ENST00000525211 PPP2R1AP30153 589 aa8.85□□□□□ -0.99
CD44-214ENST00000525211 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
CD44-214ENST00000525211 PRKRIP1Q9H875 184 aaPredicted RBP8.85□□□□□ -0.99
CD44-214ENST00000525211 SPATA31A6Q5VVP1 1343 aa8.84□□□□□ -0.99
CD44-214ENST00000525211 HOXC9P31274 260 aa8.84□□□□□ -0.99
CD44-214ENST00000525211 MTHFSP49914 203 aa8.84□□□□□ -0.99
CD44-214ENST00000525211 C8orf37Q96NL8 207 aa8.84□□□□□ -0.99
CD44-214ENST00000525211 LMO7Q8WWI1 1683 aa8.84□□□□□ -0.99
CD44-214ENST00000525211 CPDO75976 1380 aa8.84□□□□□ -0.99
CD44-214ENST00000525211 NSD2O96028 1365 aa8.84□□□□□ -0.99
CD44-214ENST00000525211 RGPD5Q99666 1765 aa8.84□□□□□ -1
CD44-214ENST00000525211 PPM1GO15355 546 aaPredicted RBP8.83□□□□□ -1
CD44-214ENST00000525211 PRR29P0C7W0 189 aa8.83□□□□□ -1
CD44-214ENST00000525211 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
CD44-214ENST00000525211 PRDM11Q9NQV5 511 aa8.83□□□□□ -1
CD44-214ENST00000525211 CIZ1Q9ULV3 898 aaPredicted RBP8.83□□□□□ -1
CD44-214ENST00000525211 SLIT2O94813 1529 aa8.83□□□□□ -1
CD44-214ENST00000525211 AATKQ6ZMQ8 1374 aa8.83□□□□□ -1
CD44-214ENST00000525211 BCL9LQ86UU0 1499 aa8.83□□□□□ -1
CD44-214ENST00000525211 AFF2P51816 1311 aa8.82□□□□□ -1
CD44-214ENST00000525211 MAP2P11137 1827 aaKnown RBP8.82□□□□□ -1
CD44-214ENST00000525211 LTN1O94822 1766 aa8.82□□□□□ -1
CD44-214ENST00000525211 DIEXFQ68CQ4 756 aaKnown RBP8.82□□□□□ -1
CD44-214ENST00000525211 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
CD44-214ENST00000525211 KCNH5Q8NCM2 988 aa8.82□□□□□ -1
CD44-214ENST00000525211 IP6K1Q92551 441 aa8.82□□□□□ -1
CD44-214ENST00000525211 LTV1Q96GA3 475 aaPredicted RBP8.82□□□□□ -1
CD44-214ENST00000525211 BTG4Q9NY30 223 aa8.82□□□□□ -1
CD44-214ENST00000525211 COL3A1P02461 1466 aaPredicted RBP8.82□□□□□ -1
CD44-214ENST00000525211 SMG6Q86US8 1419 aaKnown RBP8.81□□□□□ -1
CD44-214ENST00000525211 EIF4A2Q14240 407 aaKnown RBP8.81□□□□□ -1
CD44-214ENST00000525211 POTEAQ6S8J7 498 aa8.81□□□□□ -1
CD44-214ENST00000525211 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
CD44-214ENST00000525211 USHBP1Q8N6Y0 703 aa8.81□□□□□ -1
CD44-214ENST00000525211 NGLY1Q96IV0 654 aa8.81□□□□□ -1
CD44-214ENST00000525211 CREBZFQ9NS37 354 aa8.81□□□□□ -1
CD44-214ENST00000525211 PLCH1Q4KWH8 1693 aa8.81□□□□□ -1
CD44-214ENST00000525211 NRAPQ86VF7 1730 aa8.8□□□□□ -1
CD44-214ENST00000525211 RGL2O15211 777 aa8.8□□□□□ -1
CD44-214ENST00000525211 AMPHP49418 695 aa8.8□□□□□ -1
CD44-214ENST00000525211 MEX3CQ5U5Q3 659 aaKnown RBP8.8□□□□□ -1
CD44-214ENST00000525211 ANKRD24Q8TF21 1146 aa8.8□□□□□ -1
CD44-214ENST00000525211 STRN4Q9NRL3 753 aa8.8□□□□□ -1
CD44-214ENST00000525211 RGPD2P0DJD1 1756 aa8.79□□□□□ -1
CD44-214ENST00000525211 COL5A2P05997 1499 aaPredicted RBP8.79□□□□□ -1
CD44-214ENST00000525211 IL13P35225 146 aa8.79□□□□□ -1
CD44-214ENST00000525211 PLCB2Q00722 1185 aa8.79□□□□□ -1
CD44-214ENST00000525211 NBPF6Q5VWK0 638 aa8.79□□□□□ -1
CD44-214ENST00000525211 NBPF4Q96M43 638 aa8.79□□□□□ -1
CD44-214ENST00000525211 MYBBP1AQ9BQG0 1328 aaKnown RBP8.79□□□□□ -1
CD44-214ENST00000525211 COL14A1Q05707 1796 aaKnown RBP8.78□□□□□ -1
CD44-214ENST00000525211 INSRP06213 1382 aa8.78□□□□□ -1
CD44-214ENST00000525211 FLT4P35916 1363 aa8.78□□□□□ -1
CD44-214ENST00000525211 PITPNM1O00562 1244 aa8.78□□□□□ -1
CD44-214ENST00000525211 RALBP1Q15311 655 aa8.78□□□□□ -1
CD44-214ENST00000525211 AEBP1Q8IUX7 1158 aa8.78□□□□□ -1
CD44-214ENST00000525211 UNC5CLQ8IV45 518 aa8.78□□□□□ -1
CD44-214ENST00000525211 EYA1Q99502 592 aa8.78□□□□□ -1
CD44-214ENST00000525211 USP21Q9UK80 565 aa8.78□□□□□ -1
CD44-214ENST00000525211 ERBB3P21860 1342 aa8.78□□□□□ -1
CD44-214ENST00000525211 CDK12Q9NYV4 1490 aaPredicted RBP8.77□□□□□ -1
CD44-214ENST00000525211 SENP3-EIF4A1A0A087X0R7 540 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms