RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CARD14Q9BXL6 1004 aa7.39□□□□□ -1.23
HMGB1P40-201ENST00000525121 NRAPQ86VF7 1730 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 BLMP54132 1417 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 CRB1P82279 1406 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 SMG6Q86US8 1419 aaKnown RBP7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 RTL1A6NKG5 1358 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 SPATA31A5Q5VU36 1347 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 SPATA31A7Q8IWB4 1347 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 C11orf95C9JLR9 678 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 SOCS7O14512 581 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 FAM98CQ17RN3 349 aaKnown RBP7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 USP35Q9P2H5 1018 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 KIF20BQ96Q89 1820 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 LMO7Q8WWI1 1683 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 CAMTA1Q9Y6Y1 1673 aa7.38□□□□□ -1.23
HMGB1P40-201ENST00000525121 SPATA31A1Q5TZJ5 1347 aa7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 WASHC2AQ641Q2 1341 aa7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 WDR17Q8IZU2 1322 aa7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 LARP1Q6PKG0 1096 aaKnown RBP7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 MORC1Q86VD1 984 aa7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 TCP11L2Q8N4U5 519 aa7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 THRAP3Q9Y2W1 955 aaKnown RBP7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 GLI3P10071 1580 aa7.37□□□□□ -1.23
HMGB1P40-201ENST00000525121 KIF24Q5T7B8 1368 aa7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 MAP3K19Q56UN5 1328 aa7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 PPM1GO15355 546 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 SEPT12Q8IYM1 358 aa7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 ANKRD24Q8TF21 1146 aa7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 IP6K1Q92551 441 aa7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 CDCA7Q9BWT1 371 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 NLRP2Q9NX02 1062 aa7.36□□□□□ -1.23
HMGB1P40-201ENST00000525121 FLT4P35916 1363 aa7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 ERBB3P21860 1342 aa7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 HOXC9P31274 260 aa7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 TNNT2P45379 298 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 RRS1Q15050 365 aaKnown RBP7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 BARGINQ6ZT62 677 aa7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 KRT27Q7Z3Y8 459 aa7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 LTV1Q96GA3 475 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 CARD10Q9BWT7 1032 aa7.35□□□□□ -1.23
HMGB1P40-201ENST00000525121 ONECUT3O60422 494 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P40-201ENST00000525121 PDE3BQ13370 1112 aa7.34□□□□□ -1.23
HMGB1P40-201ENST00000525121 AXIN2Q9Y2T1 843 aa7.34□□□□□ -1.23
HMGB1P40-201ENST00000525121 INSRP06213 1382 aa7.33□□□□□ -1.24
HMGB1P40-201ENST00000525121 LTN1O94822 1766 aa7.33□□□□□ -1.24
HMGB1P40-201ENST00000525121 SF3B2Q13435 895 aaKnown RBP7.33□□□□□ -1.24
HMGB1P40-201ENST00000525121 CC2D1BQ5T0F9 858 aaKnown RBP7.33□□□□□ -1.24
HMGB1P40-201ENST00000525121 COL18A1P39060 1754 aa7.33□□□□□ -1.24
HMGB1P40-201ENST00000525121 NPC1L1Q9UHC9 1359 aa7.33□□□□□ -1.24
HMGB1P40-201ENST00000525121 ANKRD26Q9UPS8 1709 aa7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 FAM208AQ9UK61 1670 aaKnown RBP7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 FBLN1P23142 703 aa7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 DDB1Q16531 1140 aa7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 AMER1Q5JTC6 1135 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 EMILIN1Q9Y6C2 1016 aa7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 THSD7AQ9UPZ6 1657 aa7.32□□□□□ -1.24
HMGB1P40-201ENST00000525121 IL2RBP14784 551 aa7.31□□□□□ -1.24
HMGB1P40-201ENST00000525121 HSP90AB2PQ58FF8 381 aa7.31□□□□□ -1.24
HMGB1P40-201ENST00000525121 CCDC125Q86Z20 511 aa7.31□□□□□ -1.24
HMGB1P40-201ENST00000525121 RAPGEF4Q8WZA2 1011 aa7.31□□□□□ -1.24
HMGB1P40-201ENST00000525121 POLKQ9UBT6 870 aa7.31□□□□□ -1.24
HMGB1P40-201ENST00000525121 OVOS2A0A0G2JMS6 1433 aa7.3□□□□□ -1.24
HMGB1P40-201ENST00000525121 TNS2Q63HR2 1409 aa7.3□□□□□ -1.24
HMGB1P40-201ENST00000525121 EXOC5O00471 708 aa7.3□□□□□ -1.24
HMGB1P40-201ENST00000525121 PER1O15534 1290 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P40-201ENST00000525121 FAM196AQ6ZSG2 479 aa7.3□□□□□ -1.24
HMGB1P40-201ENST00000525121 DISP2A7MBM2 1401 aa7.29□□□□□ -1.24
HMGB1P40-201ENST00000525121 TATP17735 454 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P40-201ENST00000525121 UPF1Q92900 1129 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB1P40-201ENST00000525121 CFAP53Q96M91 514 aa7.29□□□□□ -1.24
HMGB1P40-201ENST00000525121 PARP4Q9UKK3 1724 aaKnown RBP7.29□□□□□ -1.24
HMGB1P40-201ENST00000525121 LRRC37A3O60309 1634 aa7.28□□□□□ -1.24
HMGB1P40-201ENST00000525121 PEAK1Q9H792 1746 aa7.28□□□□□ -1.24
HMGB1P40-201ENST00000525121 BAG6P46379 1132 aa7.28□□□□□ -1.24
HMGB1P40-201ENST00000525121 DDX10Q13206 875 aaKnown RBP7.28□□□□□ -1.24
HMGB1P40-201ENST00000525121 USHBP1Q8N6Y0 703 aa7.28□□□□□ -1.24
HMGB1P40-201ENST00000525121 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
HMGB1P40-201ENST00000525121 MTHFSP49914 203 aa7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 EIF4A2Q14240 407 aaKnown RBP7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 FAM182BQ5T319 152 aa7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 NBPF6Q5VWK0 638 aa7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 ZCRB1Q8TBF4 217 aaKnown RBP7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 NBPF4Q96M43 638 aa7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 WNK3Q9BYP7 1800 aa7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 PCDH11XQ9BZA7 1347 aa7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 PCDH11YQ9BZA8 1340 aa7.27□□□□□ -1.25
HMGB1P40-201ENST00000525121 ZNF316A6NFI3 1004 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 DIAPH1O60610 1272 aaKnown RBP7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 DDX54Q8TDD1 881 aaKnown RBP7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 EYA1Q99502 592 aa7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 SPG7Q9UQ90 795 aa7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 NUDCQ9Y266 331 aa7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 BRWD3Q6RI45 1802 aa7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 IGSF1Q8N6C5 1336 aa7.26□□□□□ -1.25
HMGB1P40-201ENST00000525121 PLEKHG2Q9H7P9 1386 aa7.25□□□□□ -1.25
HMGB1P40-201ENST00000525121 TRIM37O94972 964 aa7.25□□□□□ -1.25
HMGB1P40-201ENST00000525121 RALBP1Q15311 655 aa7.25□□□□□ -1.25
HMGB1P40-201ENST00000525121 MARCH10Q8NA82 808 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P40-201ENST00000525121 MEGF6O75095 1541 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms