RNA–Protein interactions for RNA: ENST00000524325.5

TSNARE1-208, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TSNARE1, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-208ENST00000524325 ABCA3Q99758 1704 aa30.52■■■□□ 2.48
TSNARE1-208ENST00000524325 EIF4A2Q14240 407 aaKnown RBP30.5■■■□□ 2.47
TSNARE1-208ENST00000524325 CDK12Q9NYV4 1490 aaPredicted RBP30.49■■■□□ 2.47
TSNARE1-208ENST00000524325 DIAPH1O60610 1272 aaKnown RBP30.49■■■□□ 2.47
TSNARE1-208ENST00000524325 FAM9BQ8IZU0 186 aa30.49■■■□□ 2.47
TSNARE1-208ENST00000524325 SHPRHQ149N8 1683 aa30.49■■■□□ 2.47
TSNARE1-208ENST00000524325 SPATA31A6Q5VVP1 1343 aa30.48■■■□□ 2.47
TSNARE1-208ENST00000524325 COL3A1P02461 1466 aaPredicted RBP30.47■■■□□ 2.47
TSNARE1-208ENST00000524325 LRP6O75581 1613 aa30.47■■■□□ 2.47
TSNARE1-208ENST00000524325 U2SURPO15042 1029 aaKnown RBP30.47■■■□□ 2.47
TSNARE1-208ENST00000524325 IL13P35225 146 aa30.47■■■□□ 2.47
TSNARE1-208ENST00000524325 PNISRQ8TF01 805 aaKnown RBP30.47■■■□□ 2.47
TSNARE1-208ENST00000524325 LTN1O94822 1766 aa30.46■■■□□ 2.47
TSNARE1-208ENST00000524325 INSRP06213 1382 aa30.46■■■□□ 2.47
TSNARE1-208ENST00000524325 RTL1A6NKG5 1358 aa30.45■■■□□ 2.47
TSNARE1-208ENST00000524325 ANKRD24Q8TF21 1146 aa30.45■■■□□ 2.47
TSNARE1-208ENST00000524325 C8orf37Q96NL8 207 aa30.45■■■□□ 2.47
TSNARE1-208ENST00000524325 BTG4Q9NY30 223 aa30.45■■■□□ 2.46
TSNARE1-208ENST00000524325 STRN4Q9NRL3 753 aa30.43■■■□□ 2.46
TSNARE1-208ENST00000524325 KIF24Q5T7B8 1368 aa30.43■■■□□ 2.46
TSNARE1-208ENST00000524325 CAMTA1Q9Y6Y1 1673 aa30.41■■■□□ 2.46
TSNARE1-208ENST00000524325 ADAMTS8Q9UP79 889 aa30.41■■■□□ 2.46
TSNARE1-208ENST00000524325 SENP3-EIF4A1A0A087X0R7 540 aa30.41■■■□□ 2.46
TSNARE1-208ENST00000524325 U2AF1L5P0DN76 240 aaPredicted RBP30.41■■■□□ 2.46
TSNARE1-208ENST00000524325 U2AF1Q01081 240 aaKnown RBP eCLIP30.41■■■□□ 2.46
TSNARE1-208ENST00000524325 MEX3CQ5U5Q3 659 aaKnown RBP30.41■■■□□ 2.46
TSNARE1-208ENST00000524325 USHBP1Q8N6Y0 703 aa30.41■■■□□ 2.46
TSNARE1-208ENST00000524325 WDR43Q15061 677 aaKnown RBP eCLIP30.4■■■□□ 2.46
TSNARE1-208ENST00000524325 CSB-PGBD3P0DP91 1061 aa30.39■■■□□ 2.46
TSNARE1-208ENST00000524325 NGLY1Q96IV0 654 aa30.39■■■□□ 2.46
TSNARE1-208ENST00000524325 ERBB3P21860 1342 aa30.39■■■□□ 2.46
TSNARE1-208ENST00000524325 HMOX1P09601 288 aa30.39■■■□□ 2.46
TSNARE1-208ENST00000524325 EYA1Q99502 592 aa30.39■■■□□ 2.46
TSNARE1-208ENST00000524325 COL18A1P39060 1754 aa30.38■■■□□ 2.45
TSNARE1-208ENST00000524325 NBPF6Q5VWK0 638 aa30.37■■■□□ 2.45
TSNARE1-208ENST00000524325 NBPF4Q96M43 638 aa30.37■■■□□ 2.45
TSNARE1-208ENST00000524325 NUDCQ9Y266 331 aa30.37■■■□□ 2.45
TSNARE1-208ENST00000524325 BLMP54132 1417 aaPredicted RBP30.37■■■□□ 2.45
TSNARE1-208ENST00000524325 EVA1CP58658 441 aa30.37■■■□□ 2.45
TSNARE1-208ENST00000524325 AEBP1Q8IUX7 1158 aa30.37■■■□□ 2.45
TSNARE1-208ENST00000524325 LARP1Q6PKG0 1096 aaKnown RBP30.35■■■□□ 2.45
TSNARE1-208ENST00000524325 NLRP2Q9NX02 1062 aa30.35■■■□□ 2.45
TSNARE1-208ENST00000524325 ILDR1Q86SU0 546 aaPredicted RBP30.34■■■□□ 2.45
TSNARE1-208ENST00000524325 LMO7Q8WWI1 1683 aa30.33■■■□□ 2.45
TSNARE1-208ENST00000524325 COL5A2P05997 1499 aaPredicted RBP30.33■■■□□ 2.45
TSNARE1-208ENST00000524325 SULT6B1Q6IMI4 303 aa30.33■■■□□ 2.45
TSNARE1-208ENST00000524325 CCDC146Q8IYE0 955 aa30.33■■■□□ 2.45
TSNARE1-208ENST00000524325 RGPD5Q99666 1765 aa30.32■■■□□ 2.44
TSNARE1-208ENST00000524325 USP35Q9P2H5 1018 aa30.31■■■□□ 2.44
TSNARE1-208ENST00000524325 TOM1L2Q6ZVM7 507 aa30.3■■■□□ 2.44
TSNARE1-208ENST00000524325 WDR17Q8IZU2 1322 aa30.29■■■□□ 2.44
TSNARE1-208ENST00000524325 COL14A1Q05707 1796 aaKnown RBP30.29■■■□□ 2.44
TSNARE1-208ENST00000524325 IGSF1Q8N6C5 1336 aa30.28■■■□□ 2.44
TSNARE1-208ENST00000524325 SLIT2O94813 1529 aa30.26■■■□□ 2.44
TSNARE1-208ENST00000524325 FNBP4Q8N3X1 1017 aaPredicted RBP30.26■■■□□ 2.43
TSNARE1-208ENST00000524325 ABCC6O95255 1503 aa30.26■■■□□ 2.43
TSNARE1-208ENST00000524325 AFF2P51816 1311 aa30.25■■■□□ 2.43
TSNARE1-208ENST00000524325 RSPH6AQ9H0K4 717 aa30.25■■■□□ 2.43
TSNARE1-208ENST00000524325 USP21Q9UK80 565 aa30.25■■■□□ 2.43
TSNARE1-208ENST00000524325 PRKAR2BP31323 418 aa30.24■■■□□ 2.43
TSNARE1-208ENST00000524325 YTHDC1Q96MU7 727 aaKnown RBP30.24■■■□□ 2.43
TSNARE1-208ENST00000524325 BCL9LQ86UU0 1499 aa30.24■■■□□ 2.43
TSNARE1-208ENST00000524325 UNC5CLQ8IV45 518 aa30.24■■■□□ 2.43
TSNARE1-208ENST00000524325 CCDC9Q9Y3X0 531 aaKnown RBP30.23■■■□□ 2.43
TSNARE1-208ENST00000524325 PLCH1Q4KWH8 1693 aa30.22■■■□□ 2.43
TSNARE1-208ENST00000524325 PHACTR3Q96KR7 559 aa30.21■■■□□ 2.43
TSNARE1-208ENST00000524325 FCHSD2O94868 740 aa30.2■■■□□ 2.43
TSNARE1-208ENST00000524325 PLEKHF1Q96S99 279 aa30.2■■■□□ 2.43
TSNARE1-208ENST00000524325 RGPD2P0DJD1 1756 aa30.2■■■□□ 2.42
TSNARE1-208ENST00000524325 CARD10Q9BWT7 1032 aa30.19■■■□□ 2.42
TSNARE1-208ENST00000524325 RGPD1P0DJD0 1748 aa30.19■■■□□ 2.42
TSNARE1-208ENST00000524325 CRB1P82279 1406 aa30.17■■■□□ 2.42
TSNARE1-208ENST00000524325 SALL2Q9Y467 1007 aaPredicted RBP30.17■■■□□ 2.42
TSNARE1-208ENST00000524325 KDRP35968 1356 aa30.16■■■□□ 2.42
TSNARE1-208ENST00000524325 RRP7AQ9Y3A4 280 aaKnown RBP30.15■■■□□ 2.42
TSNARE1-208ENST00000524325 APAF1O14727 1248 aa30.14■■■□□ 2.42
TSNARE1-208ENST00000524325 RUNDC1Q96C34 613 aa30.14■■■□□ 2.42
TSNARE1-208ENST00000524325 SPATA31A1Q5TZJ5 1347 aa30.13■■■□□ 2.41
TSNARE1-208ENST00000524325 NRAPQ86VF7 1730 aa30.13■■■□□ 2.41
TSNARE1-208ENST00000524325 SPATA31A5Q5VU36 1347 aa30.12■■■□□ 2.41
TSNARE1-208ENST00000524325 SPATA31A7Q8IWB4 1347 aa30.12■■■□□ 2.41
TSNARE1-208ENST00000524325 NEUROD2Q15784 382 aa30.12■■■□□ 2.41
TSNARE1-208ENST00000524325 VPS72Q15906 364 aa30.12■■■□□ 2.41
TSNARE1-208ENST00000524325 NCAPD2Q15021 1401 aa30.11■■■□□ 2.41
TSNARE1-208ENST00000524325 TCP11L2Q8N4U5 519 aa30.11■■■□□ 2.41
TSNARE1-208ENST00000524325 RAPGEF4Q8WZA2 1011 aa30.11■■■□□ 2.41
TSNARE1-208ENST00000524325 MAPK8IP3Q9UPT6 1336 aa30.1■■■□□ 2.41
TSNARE1-208ENST00000524325 HNRNPUQ00839 825 aaKnown RBP eCLIP30.1■■■□□ 2.41
TSNARE1-208ENST00000524325 MEGF6O75095 1541 aa30.1■■■□□ 2.41
TSNARE1-208ENST00000524325 QTRT2Q9H974 415 aaKnown RBP30.09■■■□□ 2.41
TSNARE1-208ENST00000524325 NWD2Q9ULI1 1742 aa30.08■■■□□ 2.41
TSNARE1-208ENST00000524325 MTHFSDQ2M296 383 aaKnown RBP30.08■■■□□ 2.41
TSNARE1-208ENST00000524325 FAM208AQ9UK61 1670 aaKnown RBP30.07■■■□□ 2.4
TSNARE1-208ENST00000524325 IL2RBP14784 551 aa30.06■■■□□ 2.4
TSNARE1-208ENST00000524325 TATP17735 454 aaPredicted RBP30.06■■■□□ 2.4
TSNARE1-208ENST00000524325 FAM98CQ17RN3 349 aaKnown RBP30.06■■■□□ 2.4
TSNARE1-208ENST00000524325 PNNQ9H307 717 aaKnown RBP30.06■■■□□ 2.4
TSNARE1-208ENST00000524325 TRPC5Q9UL62 973 aaPredicted RBP30.05■■■□□ 2.4
TSNARE1-208ENST00000524325 NEFMP07197 916 aa30.04■■■□□ 2.4
TSNARE1-208ENST00000524325 GJD4Q96KN9 370 aaPredicted RBP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms