RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
CCNC-216ENST00000523961 GLI3P10071 1580 aa17.25■□□□□ 0.35
CCNC-216ENST00000523961 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
CCNC-216ENST00000523961 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
CCNC-216ENST00000523961 ABCC6O95255 1503 aa17.23■□□□□ 0.35
CCNC-216ENST00000523961 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
CCNC-216ENST00000523961 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
CCNC-216ENST00000523961 SPATA31A1Q5TZJ5 1347 aa17.22■□□□□ 0.35
CCNC-216ENST00000523961 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
CCNC-216ENST00000523961 LARP1Q6PKG0 1096 aaKnown RBP17.22■□□□□ 0.35
CCNC-216ENST00000523961 COL18A1P39060 1754 aa17.22■□□□□ 0.35
CCNC-216ENST00000523961 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
CCNC-216ENST00000523961 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.34
CCNC-216ENST00000523961 FAM98CQ17RN3 349 aaKnown RBP17.2■□□□□ 0.34
CCNC-216ENST00000523961 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
CCNC-216ENST00000523961 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
CCNC-216ENST00000523961 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
CCNC-216ENST00000523961 CRB1P82279 1406 aa17.19■□□□□ 0.34
CCNC-216ENST00000523961 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
CCNC-216ENST00000523961 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
CCNC-216ENST00000523961 A0A0G2JS52 829 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 FBLN1P23142 703 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 AMPHP49418 695 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 MYT1Q01538 1121 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 TCP11L2Q8N4U5 519 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 IP6K1Q92551 441 aa17.18■□□□□ 0.34
CCNC-216ENST00000523961 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
CCNC-216ENST00000523961 LTN1O94822 1766 aa17.17■□□□□ 0.34
CCNC-216ENST00000523961 NSD2O96028 1365 aa17.17■□□□□ 0.34
CCNC-216ENST00000523961 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
CCNC-216ENST00000523961 BARGINQ6ZT62 677 aa17.17■□□□□ 0.34
CCNC-216ENST00000523961 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
CCNC-216ENST00000523961 ERBB3P21860 1342 aa17.16■□□□□ 0.34
CCNC-216ENST00000523961 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
CCNC-216ENST00000523961 HOXC9P31274 260 aa17.15■□□□□ 0.34
CCNC-216ENST00000523961 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
CCNC-216ENST00000523961 RGPD5Q99666 1765 aa17.15■□□□□ 0.34
CCNC-216ENST00000523961 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.33
CCNC-216ENST00000523961 KIF24Q5T7B8 1368 aa17.14■□□□□ 0.33
CCNC-216ENST00000523961 PER1O15534 1290 aaPredicted RBP17.13■□□□□ 0.33
CCNC-216ENST00000523961 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
CCNC-216ENST00000523961 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
CCNC-216ENST00000523961 MORC1Q86VD1 984 aa17.12■□□□□ 0.33
CCNC-216ENST00000523961 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
CCNC-216ENST00000523961 THSD7AQ9UPZ6 1657 aa17.12■□□□□ 0.33
CCNC-216ENST00000523961 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
CCNC-216ENST00000523961 FLT4P35916 1363 aa17.12■□□□□ 0.33
CCNC-216ENST00000523961 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
CCNC-216ENST00000523961 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
CCNC-216ENST00000523961 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCNC-216ENST00000523961 CDCA7Q9BWT1 371 aaPredicted RBP17.1■□□□□ 0.33
CCNC-216ENST00000523961 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
CCNC-216ENST00000523961 POLKQ9UBT6 870 aa17.09■□□□□ 0.33
CCNC-216ENST00000523961 INSRP06213 1382 aa17.09■□□□□ 0.33
CCNC-216ENST00000523961 BRWD3Q6RI45 1802 aa17.09■□□□□ 0.33
CCNC-216ENST00000523961 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.32
CCNC-216ENST00000523961 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
CCNC-216ENST00000523961 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
CCNC-216ENST00000523961 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
CCNC-216ENST00000523961 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
CCNC-216ENST00000523961 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
CCNC-216ENST00000523961 FAM208AQ9UK61 1670 aaKnown RBP17.06■□□□□ 0.32
CCNC-216ENST00000523961 DISP2A7MBM2 1401 aa17.05■□□□□ 0.32
CCNC-216ENST00000523961 DDB1Q16531 1140 aa17.05■□□□□ 0.32
CCNC-216ENST00000523961 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
CCNC-216ENST00000523961 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
CCNC-216ENST00000523961 IL2RBP14784 551 aa17.04■□□□□ 0.32
CCNC-216ENST00000523961 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
CCNC-216ENST00000523961 PARP4Q9UKK3 1724 aaKnown RBP17.04■□□□□ 0.32
CCNC-216ENST00000523961 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
CCNC-216ENST00000523961 EXOC5O00471 708 aa17.02■□□□□ 0.32
CCNC-216ENST00000523961 FAM182BQ5T319 152 aa17.02■□□□□ 0.32
CCNC-216ENST00000523961 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.32
CCNC-216ENST00000523961 FAM196AQ6ZSG2 479 aa17.02■□□□□ 0.32
CCNC-216ENST00000523961 NBPF4Q96M43 638 aa17.02■□□□□ 0.32
CCNC-216ENST00000523961 WNK3Q9BYP7 1800 aa17.01■□□□□ 0.31
CCNC-216ENST00000523961 LRRC37A3O60309 1634 aa17■□□□□ 0.31
CCNC-216ENST00000523961 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
CCNC-216ENST00000523961 TNS2Q63HR2 1409 aa16.98■□□□□ 0.31
CCNC-216ENST00000523961 SF3B2Q13435 895 aaKnown RBP16.98■□□□□ 0.31
CCNC-216ENST00000523961 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
CCNC-216ENST00000523961 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
CCNC-216ENST00000523961 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
CCNC-216ENST00000523961 MTHFSP49914 203 aa16.97■□□□□ 0.31
CCNC-216ENST00000523961 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
CCNC-216ENST00000523961 RAPGEF4Q8WZA2 1011 aa16.97■□□□□ 0.31
CCNC-216ENST00000523961 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
CCNC-216ENST00000523961 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
CCNC-216ENST00000523961 EYA1Q99502 592 aa16.96■□□□□ 0.31
CCNC-216ENST00000523961 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
CCNC-216ENST00000523961 EP400Q96L91 3159 aa16.95■□□□□ 0.3
CCNC-216ENST00000523961 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
CCNC-216ENST00000523961 TRIM37O94972 964 aa16.94■□□□□ 0.3
CCNC-216ENST00000523961 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
CCNC-216ENST00000523961 MEGF6O75095 1541 aa16.94■□□□□ 0.3
CCNC-216ENST00000523961 BCL9O00512 1426 aa16.94■□□□□ 0.3
CCNC-216ENST00000523961 BAG6P46379 1132 aa16.92■□□□□ 0.3
CCNC-216ENST00000523961 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms