RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 NINLQ9Y2I6 1382 aa29.39■■■□□ 2.3
PTP4A3-205ENST00000523147 EDC4Q6P2E9 1401 aaKnown RBP29.39■■■□□ 2.3
PTP4A3-205ENST00000523147 CCER1Q8TC90 406 aaPredicted RBP29.39■■■□□ 2.3
PTP4A3-205ENST00000523147 BAG6P46379 1132 aa29.38■■■□□ 2.29
PTP4A3-205ENST00000523147 AXIN2Q9Y2T1 843 aa29.38■■■□□ 2.29
PTP4A3-205ENST00000523147 CSB-PGBD3P0DP91 1061 aa29.37■■■□□ 2.29
PTP4A3-205ENST00000523147 USP31Q70CQ4 1352 aa29.37■■■□□ 2.29
PTP4A3-205ENST00000523147 FAM196AQ6ZSG2 479 aa29.36■■■□□ 2.29
PTP4A3-205ENST00000523147 COL18A1P39060 1754 aa29.35■■■□□ 2.29
PTP4A3-205ENST00000523147 WDR17Q8IZU2 1322 aa29.34■■■□□ 2.29
PTP4A3-205ENST00000523147 CDCA8Q53HL2 280 aa29.33■■■□□ 2.29
PTP4A3-205ENST00000523147 NFAT5O94916 1531 aa29.33■■■□□ 2.29
PTP4A3-205ENST00000523147 RGPD1P0DJD0 1748 aa29.31■■■□□ 2.28
PTP4A3-205ENST00000523147 TRIM37O94972 964 aa29.29■■■□□ 2.28
PTP4A3-205ENST00000523147 RGPD5Q99666 1765 aa29.29■■■□□ 2.28
PTP4A3-205ENST00000523147 USP54Q70EL1 1684 aa29.28■■■□□ 2.28
PTP4A3-205ENST00000523147 EN1Q05925 392 aaPredicted RBP29.27■■■□□ 2.28
PTP4A3-205ENST00000523147 PARP4Q9UKK3 1724 aaKnown RBP29.26■■■□□ 2.27
PTP4A3-205ENST00000523147 DDB1Q16531 1140 aa29.26■■■□□ 2.27
PTP4A3-205ENST00000523147 CARD10Q9BWT7 1032 aa29.26■■■□□ 2.27
PTP4A3-205ENST00000523147 ANKRD36BQ8N2N9 1353 aa29.26■■■□□ 2.27
PTP4A3-205ENST00000523147 COG3Q96JB2 828 aa29.25■■■□□ 2.27
PTP4A3-205ENST00000523147 CDCA7Q9BWT1 371 aaPredicted RBP29.25■■■□□ 2.27
PTP4A3-205ENST00000523147 ABCC6O95255 1503 aa29.25■■■□□ 2.27
PTP4A3-205ENST00000523147 OVOS2A0A0J9YW53 1432 aa29.23■■■□□ 2.27
PTP4A3-205ENST00000523147 OVOS2Q6IE36 1432 aa29.23■■■□□ 2.27
PTP4A3-205ENST00000523147 C11orf95C9JLR9 678 aaPredicted RBP29.23■■■□□ 2.27
PTP4A3-205ENST00000523147 LTN1O94822 1766 aa29.23■■■□□ 2.27
PTP4A3-205ENST00000523147 APBA3O96018 575 aa29.22■■■□□ 2.27
PTP4A3-205ENST00000523147 TNS1Q9HBL0 1735 aaKnown RBP29.2■■■□□ 2.27
PTP4A3-205ENST00000523147 NLRP2Q9NX02 1062 aa29.2■■■□□ 2.26
PTP4A3-205ENST00000523147 CCDC7Q96M83 1385 aa29.19■■■□□ 2.26
PTP4A3-205ENST00000523147 OVOS2A0A0G2JMS6 1433 aa29.18■■■□□ 2.26
PTP4A3-205ENST00000523147 ERBB3P21860 1342 aa29.18■■■□□ 2.26
PTP4A3-205ENST00000523147 LRRC37A3O60309 1634 aa29.17■■■□□ 2.26
PTP4A3-205ENST00000523147 ANKRD24Q8TF21 1146 aa29.17■■■□□ 2.26
PTP4A3-205ENST00000523147 DISP2A7MBM2 1401 aa29.17■■■□□ 2.26
PTP4A3-205ENST00000523147 EZH2Q15910 746 aaKnown RBP29.16■■■□□ 2.26
PTP4A3-205ENST00000523147 WNK3Q9BYP7 1800 aa29.15■■■□□ 2.26
PTP4A3-205ENST00000523147 EXOC5O00471 708 aa29.15■■■□□ 2.26
PTP4A3-205ENST00000523147 IP6K1Q92551 441 aa29.14■■■□□ 2.26
PTP4A3-205ENST00000523147 AMPHP49418 695 aa29.13■■■□□ 2.25
PTP4A3-205ENST00000523147 GGNBP2Q9H3C7 697 aa29.13■■■□□ 2.25
PTP4A3-205ENST00000523147 FYB1O15117 783 aa29.12■■■□□ 2.25
PTP4A3-205ENST00000523147 EIF4G2P78344 907 aaKnown RBP eCLIP29.12■■■□□ 2.256e-7■■■■■ 31.9
PTP4A3-205ENST00000523147 CAMKK2Q96RR4 588 aa29.12■■■□□ 2.25
PTP4A3-205ENST00000523147 POLR3GLQ9BT43 218 aa29.12■■■□□ 2.25
PTP4A3-205ENST00000523147 LTV1Q96GA3 475 aaPredicted RBP29.11■■■□□ 2.25
PTP4A3-205ENST00000523147 PSDA5PKW4 1024 aaPredicted RBP29.1■■■□□ 2.25
PTP4A3-205ENST00000523147 MARCH10Q8NA82 808 aaPredicted RBP29.1■■■□□ 2.25
PTP4A3-205ENST00000523147 PARD3Q8TEW0 1356 aa29.1■■■□□ 2.25
PTP4A3-205ENST00000523147 MAP3K19Q56UN5 1328 aa29.09■■■□□ 2.25
PTP4A3-205ENST00000523147 IL2RBP14784 551 aa29.08■■■□□ 2.25
PTP4A3-205ENST00000523147 FBLN1P23142 703 aa29.08■■■□□ 2.25
PTP4A3-205ENST00000523147 PEAK1Q9H792 1746 aa29.07■■■□□ 2.24
PTP4A3-205ENST00000523147 SRCAPQ6ZRS2 3230 aa29.07■■■□□ 2.24
PTP4A3-205ENST00000523147 HOXC9P31274 260 aa29.06■■■□□ 2.24
PTP4A3-205ENST00000523147 MYOM1P52179 1685 aa29.05■■■□□ 2.24
PTP4A3-205ENST00000523147 HSPA5P11021 654 aaKnown RBP29.04■■■□□ 2.24
PTP4A3-205ENST00000523147 R3HDM1Q15032 1099 aaKnown RBP29.04■■■□□ 2.24
PTP4A3-205ENST00000523147 RRS1Q15050 365 aaKnown RBP29.04■■■□□ 2.24
PTP4A3-205ENST00000523147 BCL11BQ9C0K0 894 aaPredicted RBP29.04■■■□□ 2.24
PTP4A3-205ENST00000523147 KIF20BQ96Q89 1820 aa29.04■■■□□ 2.24
PTP4A3-205ENST00000523147 TNS2Q63HR2 1409 aa29.03■■■□□ 2.24
PTP4A3-205ENST00000523147 NSD3Q9BZ95 1437 aa29.03■■■□□ 2.24
PTP4A3-205ENST00000523147 CARD14Q9BXL6 1004 aa29.03■■■□□ 2.24
PTP4A3-205ENST00000523147 NBPF14Q5TI25 921 aa29.01■■■□□ 2.23
PTP4A3-205ENST00000523147 SBF2Q86WG5 1849 aa29.01■■■□□ 2.23
PTP4A3-205ENST00000523147 FAM208AQ9UK61 1670 aaKnown RBP29■■■□□ 2.23
PTP4A3-205ENST00000523147 RTL1A6NKG5 1358 aa29■■■□□ 2.23
PTP4A3-205ENST00000523147 BCL9O00512 1426 aa28.99■■■□□ 2.23
PTP4A3-205ENST00000523147 PLSCR1O15162 318 aa28.97■■■□□ 2.23
PTP4A3-205ENST00000523147 RREB1Q92766 1687 aa28.96■■■□□ 2.23
PTP4A3-205ENST00000523147 CGNL1Q0VF96 1302 aa28.95■■■□□ 2.23
PTP4A3-205ENST00000523147 SMG6Q86US8 1419 aaKnown RBP28.95■■■□□ 2.23
PTP4A3-205ENST00000523147 PTF1AQ7RTS3 328 aa28.95■■■□□ 2.22
PTP4A3-205ENST00000523147 ACSBG1Q96GR2 724 aa28.93■■■□□ 2.22
PTP4A3-205ENST00000523147 NUP188Q5SRE5 1749 aa28.92■■■□□ 2.22
PTP4A3-205ENST00000523147 DDX54Q8TDD1 881 aaKnown RBP28.92■■■□□ 2.22
PTP4A3-205ENST00000523147 FLT4P35916 1363 aa28.9■■■□□ 2.22
PTP4A3-205ENST00000523147 PPM1GO15355 546 aaPredicted RBP28.9■■■□□ 2.22
PTP4A3-205ENST00000523147 HSP90AB2PQ58FF8 381 aa28.9■■■□□ 2.22
PTP4A3-205ENST00000523147 KIF24Q5T7B8 1368 aa28.89■■■□□ 2.22
PTP4A3-205ENST00000523147 RGPD3A6NKT7 1758 aaPredicted RBP28.89■■■□□ 2.22
PTP4A3-205ENST00000523147 RGPD4Q7Z3J3 1758 aa28.89■■■□□ 2.22
PTP4A3-205ENST00000523147 KCNQ2O43526 872 aa28.89■■■□□ 2.22
PTP4A3-205ENST00000523147 INSRP06213 1382 aa28.88■■■□□ 2.21
PTP4A3-205ENST00000523147 NBPF6Q5VWK0 638 aa28.88■■■□□ 2.21
PTP4A3-205ENST00000523147 NBPF4Q96M43 638 aa28.88■■■□□ 2.21
PTP4A3-205ENST00000523147 RGPD2P0DJD1 1756 aa28.88■■■□□ 2.21
PTP4A3-205ENST00000523147 USHBP1Q8N6Y0 703 aa28.86■■■□□ 2.21
PTP4A3-205ENST00000523147 PANK3Q9H999 370 aa28.86■■■□□ 2.21
PTP4A3-205ENST00000523147 EMILIN1Q9Y6C2 1016 aa28.86■■■□□ 2.21
PTP4A3-205ENST00000523147 LRP5O75197 1615 aa28.86■■■□□ 2.21
PTP4A3-205ENST00000523147 ZCRB1Q8TBF4 217 aaKnown RBP28.85■■■□□ 2.21
PTP4A3-205ENST00000523147 RAPGEF4Q8WZA2 1011 aa28.85■■■□□ 2.21
PTP4A3-205ENST00000523147 NHSQ6T4R5 1651 aa28.85■■■□□ 2.21
PTP4A3-205ENST00000523147 TXNRD1Q16881 649 aa28.82■■■□□ 2.2
PTP4A3-205ENST00000523147 TATP17735 454 aaPredicted RBP28.81■■■□□ 2.2
PTP4A3-205ENST00000523147 TNNT2P45379 298 aaPredicted RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms