RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 RGS12O14924 1447 aa16.26■□□□□ 0.19
PVT1-215ENST00000522963 GLI3P10071 1580 aa16.25■□□□□ 0.19
PVT1-215ENST00000522963 NSD2O96028 1365 aa16.25■□□□□ 0.19
PVT1-215ENST00000522963 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
PVT1-215ENST00000522963 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
PVT1-215ENST00000522963 OVOS2A0A0J9YW53 1432 aa16.23■□□□□ 0.19
PVT1-215ENST00000522963 OVOS2Q6IE36 1432 aa16.23■□□□□ 0.19
PVT1-215ENST00000522963 FAM98CQ17RN3 349 aaKnown RBP16.23■□□□□ 0.19
PVT1-215ENST00000522963 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
PVT1-215ENST00000522963 ARHGEF25Q86VW2 580 aa16.23■□□□□ 0.19
PVT1-215ENST00000522963 KIF20BQ96Q89 1820 aa16.23■□□□□ 0.19
PVT1-215ENST00000522963 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
PVT1-215ENST00000522963 CSB-PGBD3P0DP91 1061 aa16.22■□□□□ 0.19
PVT1-215ENST00000522963 FBLN1P23142 703 aa16.22■□□□□ 0.19
PVT1-215ENST00000522963 NFAT5O94916 1531 aa16.22■□□□□ 0.19
PVT1-215ENST00000522963 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
PVT1-215ENST00000522963 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 LMO7Q8WWI1 1683 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 LTN1O94822 1766 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 AXIN2Q9Y2T1 843 aa16.21■□□□□ 0.19
PVT1-215ENST00000522963 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
PVT1-215ENST00000522963 COL18A1P39060 1754 aa16.2■□□□□ 0.18
PVT1-215ENST00000522963 COL5A2P05997 1499 aaPredicted RBP16.19■□□□□ 0.18
PVT1-215ENST00000522963 PARD3Q8TEW0 1356 aa16.19■□□□□ 0.18
PVT1-215ENST00000522963 ANP32CO43423 234 aa16.19■□□□□ 0.18
PVT1-215ENST00000522963 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
PVT1-215ENST00000522963 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
PVT1-215ENST00000522963 TNNT2P45379 298 aaPredicted RBP16.18■□□□□ 0.18
PVT1-215ENST00000522963 AMPHP49418 695 aa16.18■□□□□ 0.18
PVT1-215ENST00000522963 RALBP1Q15311 655 aa16.18■□□□□ 0.18
PVT1-215ENST00000522963 BRWD3Q6RI45 1802 aa16.17■□□□□ 0.18
PVT1-215ENST00000522963 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
PVT1-215ENST00000522963 LTV1Q96GA3 475 aaPredicted RBP16.17■□□□□ 0.18
PVT1-215ENST00000522963 MAP3K19Q56UN5 1328 aa16.16■□□□□ 0.18
PVT1-215ENST00000522963 TCP11L2Q8N4U5 519 aa16.15■□□□□ 0.18
PVT1-215ENST00000522963 CRB1P82279 1406 aa16.14■□□□□ 0.17
PVT1-215ENST00000522963 ANKRD24Q8TF21 1146 aa16.14■□□□□ 0.17
PVT1-215ENST00000522963 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
PVT1-215ENST00000522963 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
PVT1-215ENST00000522963 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
PVT1-215ENST00000522963 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
PVT1-215ENST00000522963 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
PVT1-215ENST00000522963 KRT27Q7Z3Y8 459 aa16.13■□□□□ 0.17
PVT1-215ENST00000522963 IP6K1Q92551 441 aa16.13■□□□□ 0.17
PVT1-215ENST00000522963 ANKRD26Q9UPS8 1709 aa16.13■□□□□ 0.17
PVT1-215ENST00000522963 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
PVT1-215ENST00000522963 HOXC9P31274 260 aa16.11■□□□□ 0.17
PVT1-215ENST00000522963 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
PVT1-215ENST00000522963 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
PVT1-215ENST00000522963 MIER1Q8N108 512 aa16.11■□□□□ 0.17
PVT1-215ENST00000522963 UPF1Q92900 1129 aaKnown RBP eCLIP16.11■□□□□ 0.17
PVT1-215ENST00000522963 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
PVT1-215ENST00000522963 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
PVT1-215ENST00000522963 MAP2P11137 1827 aaKnown RBP16.1■□□□□ 0.17
PVT1-215ENST00000522963 ABCC6O95255 1503 aa16.1■□□□□ 0.17
PVT1-215ENST00000522963 THRAP3Q9Y2W1 955 aaKnown RBP16.1■□□□□ 0.17
PVT1-215ENST00000522963 ERBB3P21860 1342 aa16.1■□□□□ 0.17
PVT1-215ENST00000522963 MTHFSP49914 203 aa16.09■□□□□ 0.17
PVT1-215ENST00000522963 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
PVT1-215ENST00000522963 CARD10Q9BWT7 1032 aa16.09■□□□□ 0.17
PVT1-215ENST00000522963 BLMP54132 1417 aaPredicted RBP16.09■□□□□ 0.17
PVT1-215ENST00000522963 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.17
PVT1-215ENST00000522963 HSP90AB2PQ58FF8 381 aa16.07■□□□□ 0.16
PVT1-215ENST00000522963 SMG6Q86US8 1419 aaKnown RBP16.07■□□□□ 0.16
PVT1-215ENST00000522963 RGPD2P0DJD1 1756 aa16.06■□□□□ 0.16
PVT1-215ENST00000522963 RTL1A6NKG5 1358 aa16.06■□□□□ 0.16
PVT1-215ENST00000522963 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
PVT1-215ENST00000522963 FLT4P35916 1363 aa16.05■□□□□ 0.16
PVT1-215ENST00000522963 DDB1Q16531 1140 aa16.05■□□□□ 0.16
PVT1-215ENST00000522963 CCDC184Q52MB2 194 aa16.05■□□□□ 0.16
PVT1-215ENST00000522963 WNK3Q9BYP7 1800 aa16.04■□□□□ 0.16
PVT1-215ENST00000522963 KIF24Q5T7B8 1368 aa16.03■□□□□ 0.16
PVT1-215ENST00000522963 SF3B2Q13435 895 aaKnown RBP16.03■□□□□ 0.16
PVT1-215ENST00000522963 USHBP1Q8N6Y0 703 aa16.03■□□□□ 0.16
PVT1-215ENST00000522963 CDCA7Q9BWT1 371 aaPredicted RBP16.03■□□□□ 0.16
PVT1-215ENST00000522963 PARP4Q9UKK3 1724 aaKnown RBP16.02■□□□□ 0.16
PVT1-215ENST00000522963 INSRP06213 1382 aa16.02■□□□□ 0.16
PVT1-215ENST00000522963 EXOC5O00471 708 aa16.02■□□□□ 0.16
PVT1-215ENST00000522963 IL2RBP14784 551 aa16.02■□□□□ 0.16
PVT1-215ENST00000522963 KAT6BQ8WYB5 2073 aa16.02■□□□□ 0.15
PVT1-215ENST00000522963 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
PVT1-215ENST00000522963 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
PVT1-215ENST00000522963 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
PVT1-215ENST00000522963 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
PVT1-215ENST00000522963 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
PVT1-215ENST00000522963 LRRC37A3O60309 1634 aa16.01■□□□□ 0.15
PVT1-215ENST00000522963 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
PVT1-215ENST00000522963 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
PVT1-215ENST00000522963 MRS2Q9HD23 443 aa16■□□□□ 0.15
PVT1-215ENST00000522963 EIF4A2Q14240 407 aaKnown RBP15.99■□□□□ 0.15
PVT1-215ENST00000522963 DISP2A7MBM2 1401 aa15.99■□□□□ 0.15
PVT1-215ENST00000522963 TRIM37O94972 964 aa15.98■□□□□ 0.15
PVT1-215ENST00000522963 IL13P35225 146 aa15.98■□□□□ 0.15
PVT1-215ENST00000522963 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
PVT1-215ENST00000522963 DIAPH1O60610 1272 aaKnown RBP15.97■□□□□ 0.15
PVT1-215ENST00000522963 DEFB132Q7Z7B7 95 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms