RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 USP35Q9P2H5 1018 aa28.68■■■□□ 2.18
TRIM35-203ENST00000521253 COL18A1P39060 1754 aa28.67■■■□□ 2.18
TRIM35-203ENST00000521253 COG3Q96JB2 828 aa28.66■■■□□ 2.18
TRIM35-203ENST00000521253 CARD14Q9BXL6 1004 aa28.66■■■□□ 2.18
TRIM35-203ENST00000521253 FYB1O15117 783 aa28.64■■■□□ 2.18
TRIM35-203ENST00000521253 C11orf95C9JLR9 678 aaPredicted RBP28.63■■■□□ 2.17
TRIM35-203ENST00000521253 NSD3Q9BZ95 1437 aa28.62■■■□□ 2.17
TRIM35-203ENST00000521253 KRT27Q7Z3Y8 459 aa28.62■■■□□ 2.17
TRIM35-203ENST00000521253 GGNBP2Q9H3C7 697 aa28.62■■■□□ 2.17
TRIM35-203ENST00000521253 CRB1P82279 1406 aa28.61■■■□□ 2.17
TRIM35-203ENST00000521253 BARGINQ6ZT62 677 aa28.61■■■□□ 2.17
TRIM35-203ENST00000521253 TCP11L2Q8N4U5 519 aa28.61■■■□□ 2.17
TRIM35-203ENST00000521253 BRWD3Q6RI45 1802 aa28.61■■■□□ 2.17
TRIM35-203ENST00000521253 THSD7AQ9UPZ6 1657 aa28.61■■■□□ 2.17
TRIM35-203ENST00000521253 ABCC6O95255 1503 aa28.6■■■□□ 2.17
TRIM35-203ENST00000521253 WDR17Q8IZU2 1322 aa28.6■■■□□ 2.17
TRIM35-203ENST00000521253 TOM1L2Q6ZVM7 507 aa28.59■■■□□ 2.17
TRIM35-203ENST00000521253 THRAP3Q9Y2W1 955 aaKnown RBP28.58■■■□□ 2.17
TRIM35-203ENST00000521253 CSB-PGBD3P0DP91 1061 aa28.56■■■□□ 2.16
TRIM35-203ENST00000521253 FBLN1P23142 703 aa28.56■■■□□ 2.16
TRIM35-203ENST00000521253 LTN1O94822 1766 aa28.54■■■□□ 2.16
TRIM35-203ENST00000521253 RGPD5Q99666 1765 aa28.53■■■□□ 2.16
TRIM35-203ENST00000521253 MAP3K19Q56UN5 1328 aa28.53■■■□□ 2.16
TRIM35-203ENST00000521253 IP6K1Q92551 441 aa28.52■■■□□ 2.16
TRIM35-203ENST00000521253 PANK3Q9H999 370 aa28.52■■■□□ 2.16
TRIM35-203ENST00000521253 ERBB3P21860 1342 aa28.51■■■□□ 2.15
TRIM35-203ENST00000521253 KIF7Q2M1P5 1343 aa28.51■■■□□ 2.15
TRIM35-203ENST00000521253 CARD10Q9BWT7 1032 aa28.51■■■□□ 2.15
TRIM35-203ENST00000521253 KIF20BQ96Q89 1820 aa28.5■■■□□ 2.15
TRIM35-203ENST00000521253 CGNL1Q0VF96 1302 aa28.5■■■□□ 2.15
TRIM35-203ENST00000521253 FAM182BQ5T319 152 aa28.5■■■□□ 2.15
TRIM35-203ENST00000521253 ANKRD24Q8TF21 1146 aa28.49■■■□□ 2.15
TRIM35-203ENST00000521253 BLMP54132 1417 aaPredicted RBP28.49■■■□□ 2.15
TRIM35-203ENST00000521253 RRS1Q15050 365 aaKnown RBP28.48■■■□□ 2.15
TRIM35-203ENST00000521253 CCDC125Q86Z20 511 aa28.48■■■□□ 2.15
TRIM35-203ENST00000521253 HOXC9P31274 260 aa28.47■■■□□ 2.15
TRIM35-203ENST00000521253 AMPHP49418 695 aa28.47■■■□□ 2.15
TRIM35-203ENST00000521253 PDE3BQ13370 1112 aa28.45■■■□□ 2.14
TRIM35-203ENST00000521253 NLRP2Q9NX02 1062 aa28.45■■■□□ 2.14
TRIM35-203ENST00000521253 CCDC7Q96M83 1385 aa28.44■■■□□ 2.14
TRIM35-203ENST00000521253 RTL1A6NKG5 1358 aa28.43■■■□□ 2.14
TRIM35-203ENST00000521253 LTV1Q96GA3 475 aaPredicted RBP28.43■■■□□ 2.14
TRIM35-203ENST00000521253 CDCA7Q9BWT1 371 aaPredicted RBP28.42■■■□□ 2.14
TRIM35-203ENST00000521253 PARP4Q9UKK3 1724 aaKnown RBP28.42■■■□□ 2.14
TRIM35-203ENST00000521253 DISP2A7MBM2 1401 aa28.41■■■□□ 2.14
TRIM35-203ENST00000521253 DDB1Q16531 1140 aa28.4■■■□□ 2.14
TRIM35-203ENST00000521253 FAM196AQ6ZSG2 479 aa28.39■■■□□ 2.14
TRIM35-203ENST00000521253 LRRC37A3O60309 1634 aa28.37■■■□□ 2.13
TRIM35-203ENST00000521253 SF3B2Q13435 895 aaKnown RBP28.37■■■□□ 2.13
TRIM35-203ENST00000521253 EMILIN1Q9Y6C2 1016 aa28.36■■■□□ 2.13
TRIM35-203ENST00000521253 WASHC2AQ641Q2 1341 aa28.36■■■□□ 2.13
TRIM35-203ENST00000521253 WNK3Q9BYP7 1800 aa28.36■■■□□ 2.13
TRIM35-203ENST00000521253 FLT4P35916 1363 aa28.36■■■□□ 2.13
TRIM35-203ENST00000521253 KIF24Q5T7B8 1368 aa28.36■■■□□ 2.13
TRIM35-203ENST00000521253 HSP90AB2PQ58FF8 381 aa28.35■■■□□ 2.13
TRIM35-203ENST00000521253 DEFB132Q7Z7B7 95 aa28.35■■■□□ 2.13
TRIM35-203ENST00000521253 KNSTRNQ9Y448 316 aa28.35■■■□□ 2.13
TRIM35-203ENST00000521253 PEAK1Q9H792 1746 aa28.34■■■□□ 2.13
TRIM35-203ENST00000521253 NSD2O96028 1365 aa28.34■■■□□ 2.13
TRIM35-203ENST00000521253 INSRP06213 1382 aa28.33■■■□□ 2.13
TRIM35-203ENST00000521253 IL2RBP14784 551 aa28.32■■■□□ 2.12
TRIM35-203ENST00000521253 TNNT2P45379 298 aaPredicted RBP28.32■■■□□ 2.12
TRIM35-203ENST00000521253 EXOC5O00471 708 aa28.31■■■□□ 2.12
TRIM35-203ENST00000521253 PPM1GO15355 546 aaPredicted RBP28.31■■■□□ 2.12
TRIM35-203ENST00000521253 TRIM37O94972 964 aa28.31■■■□□ 2.12
TRIM35-203ENST00000521253 FAM208AQ9UK61 1670 aaKnown RBP28.3■■■□□ 2.12
TRIM35-203ENST00000521253 OVOS2A0A0G2JMS6 1433 aa28.3■■■□□ 2.12
TRIM35-203ENST00000521253 MARCH10Q8NA82 808 aaPredicted RBP28.3■■■□□ 2.12
TRIM35-203ENST00000521253 POLKQ9UBT6 870 aa28.3■■■□□ 2.12
TRIM35-203ENST00000521253 ANKRD26Q9UPS8 1709 aa28.29■■■□□ 2.12
TRIM35-203ENST00000521253 SMG6Q86US8 1419 aaKnown RBP28.29■■■□□ 2.12
TRIM35-203ENST00000521253 TNS2Q63HR2 1409 aa28.28■■■□□ 2.12
TRIM35-203ENST00000521253 AMER1Q5JTC6 1135 aaPredicted RBP28.28■■■□□ 2.12
TRIM35-203ENST00000521253 NBPF6Q5VWK0 638 aa28.28■■■□□ 2.12
TRIM35-203ENST00000521253 NBPF4Q96M43 638 aa28.28■■■□□ 2.12
TRIM35-203ENST00000521253 BAG6P46379 1132 aa28.27■■■□□ 2.12
TRIM35-203ENST00000521253 PER1O15534 1290 aaPredicted RBP28.26■■■□□ 2.11
TRIM35-203ENST00000521253 MORC1Q86VD1 984 aa28.26■■■□□ 2.11
TRIM35-203ENST00000521253 RGPD1P0DJD0 1748 aa28.26■■■□□ 2.11
TRIM35-203ENST00000521253 USHBP1Q8N6Y0 703 aa28.24■■■□□ 2.11
TRIM35-203ENST00000521253 TNS1Q9HBL0 1735 aaKnown RBP28.23■■■□□ 2.11
TRIM35-203ENST00000521253 BCL9O00512 1426 aa28.22■■■□□ 2.11
TRIM35-203ENST00000521253 EN1Q05925 392 aaPredicted RBP28.22■■■□□ 2.11
TRIM35-203ENST00000521253 RGPD2P0DJD1 1756 aa28.22■■■□□ 2.11
TRIM35-203ENST00000521253 MAP2P11137 1827 aaKnown RBP28.2■■■□□ 2.11
TRIM35-203ENST00000521253 APBA3O96018 575 aa28.2■■■□□ 2.1
TRIM35-203ENST00000521253 MEGF6O75095 1541 aa28.19■■■□□ 2.1
TRIM35-203ENST00000521253 CC2D1BQ5T0F9 858 aaKnown RBP28.16■■■□□ 2.1
TRIM35-203ENST00000521253 PTF1AQ7RTS3 328 aa28.15■■■□□ 2.1
TRIM35-203ENST00000521253 RAPGEF4Q8WZA2 1011 aa28.15■■■□□ 2.1
TRIM35-203ENST00000521253 CAMKK2Q96RR4 588 aa28.15■■■□□ 2.1
TRIM35-203ENST00000521253 EIF4A2Q14240 407 aaKnown RBP28.14■■■□□ 2.1
TRIM35-203ENST00000521253 EZH2Q15910 746 aaKnown RBP28.14■■■□□ 2.1
TRIM35-203ENST00000521253 DDX54Q8TDD1 881 aaKnown RBP28.14■■■□□ 2.1
TRIM35-203ENST00000521253 BCL11BQ9C0K0 894 aaPredicted RBP28.14■■■□□ 2.1
TRIM35-203ENST00000521253 ZCRB1Q8TBF4 217 aaKnown RBP28.13■■■□□ 2.09
TRIM35-203ENST00000521253 EYA1Q99502 592 aa28.13■■■□□ 2.09
TRIM35-203ENST00000521253 NCAPD2Q15021 1401 aa28.12■■■□□ 2.09
TRIM35-203ENST00000521253 TATP17735 454 aaPredicted RBP28.12■■■□□ 2.09
TRIM35-203ENST00000521253 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms