RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 GLI3P10071 1580 aa21.22■□□□□ 0.99
HDAC2-209ENST00000520895 COL18A1P39060 1754 aa21.21■□□□□ 0.99
HDAC2-209ENST00000520895 RGPD5Q99666 1765 aa21.2■□□□□ 0.99
HDAC2-209ENST00000520895 EP400Q96L91 3159 aa21.2■□□□□ 0.98
HDAC2-209ENST00000520895 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
HDAC2-209ENST00000520895 COL5A2P05997 1499 aaPredicted RBP21.18■□□□□ 0.98
HDAC2-209ENST00000520895 ABCC6O95255 1503 aa21.18■□□□□ 0.98
HDAC2-209ENST00000520895 ANKRD26Q9UPS8 1709 aa21.18■□□□□ 0.98
HDAC2-209ENST00000520895 AXIN2Q9Y2T1 843 aa21.17■□□□□ 0.98
HDAC2-209ENST00000520895 SPATA31A5Q5VU36 1347 aa21.17■□□□□ 0.98
HDAC2-209ENST00000520895 SPATA31A7Q8IWB4 1347 aa21.17■□□□□ 0.98
HDAC2-209ENST00000520895 LARP1Q6PKG0 1096 aaKnown RBP21.16■□□□□ 0.98
HDAC2-209ENST00000520895 CSB-PGBD3P0DP91 1061 aa21.15■□□□□ 0.98
HDAC2-209ENST00000520895 FBLN1P23142 703 aa21.15■□□□□ 0.98
HDAC2-209ENST00000520895 AMPHP49418 695 aa21.15■□□□□ 0.98
HDAC2-209ENST00000520895 USP35Q9P2H5 1018 aa21.15■□□□□ 0.98
HDAC2-209ENST00000520895 NSD2O96028 1365 aa21.14■□□□□ 0.98
HDAC2-209ENST00000520895 MAP3K19Q56UN5 1328 aa21.14■□□□□ 0.97
HDAC2-209ENST00000520895 SPATA31A1Q5TZJ5 1347 aa21.14■□□□□ 0.97
HDAC2-209ENST00000520895 A0A0G2JS52 829 aa21.13■□□□□ 0.97
HDAC2-209ENST00000520895 MYT1Q01538 1121 aa21.13■□□□□ 0.97
HDAC2-209ENST00000520895 RRS1Q15050 365 aaKnown RBP21.13■□□□□ 0.97
HDAC2-209ENST00000520895 FAM98CQ17RN3 349 aaKnown RBP21.13■□□□□ 0.97
HDAC2-209ENST00000520895 TOM1L2Q6ZVM7 507 aa21.13■□□□□ 0.97
HDAC2-209ENST00000520895 CRB1P82279 1406 aa21.12■□□□□ 0.97
HDAC2-209ENST00000520895 WDR17Q8IZU2 1322 aa21.12■□□□□ 0.97
HDAC2-209ENST00000520895 IP6K1Q92551 441 aa21.12■□□□□ 0.97
HDAC2-209ENST00000520895 ONECUT3O60422 494 aaPredicted RBP21.11■□□□□ 0.97
HDAC2-209ENST00000520895 BLMP54132 1417 aaPredicted RBP21.11■□□□□ 0.97
HDAC2-209ENST00000520895 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
HDAC2-209ENST00000520895 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
HDAC2-209ENST00000520895 TNNT2P45379 298 aaPredicted RBP21.1■□□□□ 0.97
HDAC2-209ENST00000520895 MORC1Q86VD1 984 aa21.1■□□□□ 0.97
HDAC2-209ENST00000520895 SEPT12Q8IYM1 358 aa21.1■□□□□ 0.97
HDAC2-209ENST00000520895 HOXC9P31274 260 aa21.09■□□□□ 0.97
HDAC2-209ENST00000520895 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
HDAC2-209ENST00000520895 RTL1A6NKG5 1358 aa21.09■□□□□ 0.97
HDAC2-209ENST00000520895 ERBB3P21860 1342 aa21.08■□□□□ 0.97
HDAC2-209ENST00000520895 PER1O15534 1290 aaPredicted RBP21.08■□□□□ 0.97
HDAC2-209ENST00000520895 AMER1Q5JTC6 1135 aaPredicted RBP21.08■□□□□ 0.97
HDAC2-209ENST00000520895 ANKRD24Q8TF21 1146 aa21.08■□□□□ 0.97
HDAC2-209ENST00000520895 LTV1Q96GA3 475 aaPredicted RBP21.08■□□□□ 0.97
HDAC2-209ENST00000520895 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
HDAC2-209ENST00000520895 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
HDAC2-209ENST00000520895 BARGINQ6ZT62 677 aa21.06■□□□□ 0.96
HDAC2-209ENST00000520895 NLRP2Q9NX02 1062 aa21.06■□□□□ 0.96
HDAC2-209ENST00000520895 KIF24Q5T7B8 1368 aa21.06■□□□□ 0.96
HDAC2-209ENST00000520895 FAM208AQ9UK61 1670 aaKnown RBP21.05■□□□□ 0.96
HDAC2-209ENST00000520895 THSD7AQ9UPZ6 1657 aa21.05■□□□□ 0.96
HDAC2-209ENST00000520895 PEAK1Q9H792 1746 aa21.05■□□□□ 0.96
HDAC2-209ENST00000520895 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
HDAC2-209ENST00000520895 CARD10Q9BWT7 1032 aa21.05■□□□□ 0.96
HDAC2-209ENST00000520895 EMILIN1Q9Y6C2 1016 aa21.05■□□□□ 0.96
HDAC2-209ENST00000520895 FLT4P35916 1363 aa21.05■□□□□ 0.96
HDAC2-209ENST00000520895 CNGB1Q14028 1251 aaPredicted RBP21.04■□□□□ 0.96
HDAC2-209ENST00000520895 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
HDAC2-209ENST00000520895 UPF1Q92900 1129 aaKnown RBP eCLIP21.03■□□□□ 0.96
HDAC2-209ENST00000520895 POLKQ9UBT6 870 aa21.03■□□□□ 0.96
HDAC2-209ENST00000520895 WNK3Q9BYP7 1800 aa21.02■□□□□ 0.96
HDAC2-209ENST00000520895 HSP90AB2PQ58FF8 381 aa21.02■□□□□ 0.96
HDAC2-209ENST00000520895 INSRP06213 1382 aa21.01■□□□□ 0.95
HDAC2-209ENST00000520895 KRT27Q7Z3Y8 459 aa21.01■□□□□ 0.95
HDAC2-209ENST00000520895 NPC1L1Q9UHC9 1359 aa21■□□□□ 0.95
HDAC2-209ENST00000520895 RGPD2P0DJD1 1756 aa21■□□□□ 0.95
HDAC2-209ENST00000520895 PARP4Q9UKK3 1724 aaKnown RBP20.99■□□□□ 0.95
HDAC2-209ENST00000520895 CDCA7Q9BWT1 371 aaPredicted RBP20.99■□□□□ 0.95
HDAC2-209ENST00000520895 PDE3BQ13370 1112 aa20.98■□□□□ 0.95
HDAC2-209ENST00000520895 DDX10Q13206 875 aaKnown RBP20.96■□□□□ 0.95
HDAC2-209ENST00000520895 DDB1Q16531 1140 aa20.95■□□□□ 0.94
HDAC2-209ENST00000520895 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
HDAC2-209ENST00000520895 IL2RBP14784 551 aa20.94■□□□□ 0.94
HDAC2-209ENST00000520895 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
HDAC2-209ENST00000520895 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
HDAC2-209ENST00000520895 DISP2A7MBM2 1401 aa20.93■□□□□ 0.94
HDAC2-209ENST00000520895 EXOC5O00471 708 aa20.91■□□□□ 0.94
HDAC2-209ENST00000520895 MTHFSP49914 203 aa20.91■□□□□ 0.94
HDAC2-209ENST00000520895 FAM182BQ5T319 152 aa20.91■□□□□ 0.94
HDAC2-209ENST00000520895 USHBP1Q8N6Y0 703 aa20.91■□□□□ 0.94
HDAC2-209ENST00000520895 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.93
HDAC2-209ENST00000520895 EIF4A2Q14240 407 aaKnown RBP20.89■□□□□ 0.93
HDAC2-209ENST00000520895 RAPGEF4Q8WZA2 1011 aa20.88■□□□□ 0.93
HDAC2-209ENST00000520895 FAM196AQ6ZSG2 479 aa20.87■□□□□ 0.93
HDAC2-209ENST00000520895 EYA1Q99502 592 aa20.87■□□□□ 0.93
HDAC2-209ENST00000520895 TNS2Q63HR2 1409 aa20.87■□□□□ 0.93
HDAC2-209ENST00000520895 CCDC125Q86Z20 511 aa20.86■□□□□ 0.93
HDAC2-209ENST00000520895 TATP17735 454 aaPredicted RBP20.85■□□□□ 0.93
HDAC2-209ENST00000520895 OVOS2A0A0G2JMS6 1433 aa20.85■□□□□ 0.93
HDAC2-209ENST00000520895 MEGF6O75095 1541 aa20.84■□□□□ 0.93
HDAC2-209ENST00000520895 SF3B2Q13435 895 aaKnown RBP20.84■□□□□ 0.93
HDAC2-209ENST00000520895 MARCH10Q8NA82 808 aaPredicted RBP20.83■□□□□ 0.93
HDAC2-209ENST00000520895 RGPD1P0DJD0 1748 aa20.82■□□□□ 0.92
HDAC2-209ENST00000520895 PPP2R1AP30153 589 aa20.82■□□□□ 0.92
HDAC2-209ENST00000520895 ZCRB1Q8TBF4 217 aaKnown RBP20.82■□□□□ 0.92
HDAC2-209ENST00000520895 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
HDAC2-209ENST00000520895 NCAPD2Q15021 1401 aa20.81■□□□□ 0.92
HDAC2-209ENST00000520895 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
HDAC2-209ENST00000520895 IL13P35225 146 aa20.81■□□□□ 0.92
HDAC2-209ENST00000520895 CFAP53Q96M91 514 aa20.81■□□□□ 0.92
HDAC2-209ENST00000520895 PARD3Q8TEW0 1356 aa20.81■□□□□ 0.92
HDAC2-209ENST00000520895 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms