RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
SPIDR-212ENST00000519661 BARGINQ6ZT62 677 aa15.95■□□□□ 0.14
SPIDR-212ENST00000519661 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
SPIDR-212ENST00000519661 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
SPIDR-212ENST00000519661 CRB1P82279 1406 aa15.94■□□□□ 0.14
SPIDR-212ENST00000519661 PER1O15534 1290 aaPredicted RBP15.94■□□□□ 0.14
SPIDR-212ENST00000519661 AXIN2Q9Y2T1 843 aa15.94■□□□□ 0.14
SPIDR-212ENST00000519661 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
SPIDR-212ENST00000519661 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
SPIDR-212ENST00000519661 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
SPIDR-212ENST00000519661 PANK3Q9H999 370 aa15.93■□□□□ 0.14
SPIDR-212ENST00000519661 ERBB3P21860 1342 aa15.93■□□□□ 0.14
SPIDR-212ENST00000519661 IP6K1Q92551 441 aa15.92■□□□□ 0.14
SPIDR-212ENST00000519661 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
SPIDR-212ENST00000519661 SMG6Q86US8 1419 aaKnown RBP15.91■□□□□ 0.14
SPIDR-212ENST00000519661 MAP3K19Q56UN5 1328 aa15.91■□□□□ 0.14
SPIDR-212ENST00000519661 LTN1O94822 1766 aa15.9■□□□□ 0.14
SPIDR-212ENST00000519661 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
SPIDR-212ENST00000519661 LARP1Q6PKG0 1096 aaKnown RBP15.9■□□□□ 0.14
SPIDR-212ENST00000519661 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
SPIDR-212ENST00000519661 DISP2A7MBM2 1401 aa15.9■□□□□ 0.14
SPIDR-212ENST00000519661 EP400Q96L91 3159 aa15.9■□□□□ 0.14
SPIDR-212ENST00000519661 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.13
SPIDR-212ENST00000519661 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
SPIDR-212ENST00000519661 TCP11L2Q8N4U5 519 aa15.88■□□□□ 0.13
SPIDR-212ENST00000519661 FAM208AQ9UK61 1670 aaKnown RBP15.88■□□□□ 0.13
SPIDR-212ENST00000519661 INSRP06213 1382 aa15.87■□□□□ 0.13
SPIDR-212ENST00000519661 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
SPIDR-212ENST00000519661 HOXC9P31274 260 aa15.87■□□□□ 0.13
SPIDR-212ENST00000519661 SEPT12Q8IYM1 358 aa15.87■□□□□ 0.13
SPIDR-212ENST00000519661 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
SPIDR-212ENST00000519661 PARP4Q9UKK3 1724 aaKnown RBP15.87■□□□□ 0.13
SPIDR-212ENST00000519661 FLT4P35916 1363 aa15.87■□□□□ 0.13
SPIDR-212ENST00000519661 BCL9O00512 1426 aa15.86■□□□□ 0.13
SPIDR-212ENST00000519661 PEAK1Q9H792 1746 aa15.85■□□□□ 0.13
SPIDR-212ENST00000519661 EVA1CP58658 441 aa15.85■□□□□ 0.13
SPIDR-212ENST00000519661 STRN4Q9NRL3 753 aa15.85■□□□□ 0.13
SPIDR-212ENST00000519661 PLEKHG2Q9H7P9 1386 aa15.85■□□□□ 0.13
SPIDR-212ENST00000519661 FAM98CQ17RN3 349 aaKnown RBP15.84■□□□□ 0.13
SPIDR-212ENST00000519661 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
SPIDR-212ENST00000519661 RGPD5Q99666 1765 aa15.83■□□□□ 0.12
SPIDR-212ENST00000519661 WNK3Q9BYP7 1800 aa15.83■□□□□ 0.12
SPIDR-212ENST00000519661 SOX12O15370 315 aa15.82■□□□□ 0.12
SPIDR-212ENST00000519661 KRT27Q7Z3Y8 459 aa15.82■□□□□ 0.12
SPIDR-212ENST00000519661 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
SPIDR-212ENST00000519661 UPF1Q92900 1129 aaKnown RBP eCLIP15.82■□□□□ 0.12
SPIDR-212ENST00000519661 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
SPIDR-212ENST00000519661 CCDC9Q9Y3X0 531 aaKnown RBP15.82■□□□□ 0.12
SPIDR-212ENST00000519661 BRWD3Q6RI45 1802 aa15.82■□□□□ 0.12
SPIDR-212ENST00000519661 LRRC37A3O60309 1634 aa15.81■□□□□ 0.12
SPIDR-212ENST00000519661 TOM1L2Q6ZVM7 507 aa15.81■□□□□ 0.12
SPIDR-212ENST00000519661 CCDC125Q86Z20 511 aa15.81■□□□□ 0.12
SPIDR-212ENST00000519661 FBLN1P23142 703 aa15.8■□□□□ 0.12
SPIDR-212ENST00000519661 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
SPIDR-212ENST00000519661 POLR3GLQ9BT43 218 aa15.8■□□□□ 0.12
SPIDR-212ENST00000519661 TNS2Q63HR2 1409 aa15.79■□□□□ 0.12
SPIDR-212ENST00000519661 AMPHP49418 695 aa15.79■□□□□ 0.12
SPIDR-212ENST00000519661 EMILIN1Q9Y6C2 1016 aa15.78■□□□□ 0.12
SPIDR-212ENST00000519661 HSP90AB2PQ58FF8 381 aa15.77■□□□□ 0.12
SPIDR-212ENST00000519661 ZBTB7CA1YPR0 619 aa15.75■□□□□ 0.11
SPIDR-212ENST00000519661 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
SPIDR-212ENST00000519661 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
SPIDR-212ENST00000519661 USP35Q9P2H5 1018 aa15.75■□□□□ 0.11
SPIDR-212ENST00000519661 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
SPIDR-212ENST00000519661 MAP2P11137 1827 aaKnown RBP15.74■□□□□ 0.11
SPIDR-212ENST00000519661 IL2RBP14784 551 aa15.74■□□□□ 0.11
SPIDR-212ENST00000519661 NBPF6Q5VWK0 638 aa15.74■□□□□ 0.11
SPIDR-212ENST00000519661 FAM196AQ6ZSG2 479 aa15.74■□□□□ 0.11
SPIDR-212ENST00000519661 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
SPIDR-212ENST00000519661 NLRP2Q9NX02 1062 aa15.74■□□□□ 0.11
SPIDR-212ENST00000519661 DDB1Q16531 1140 aa15.73■□□□□ 0.11
SPIDR-212ENST00000519661 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
SPIDR-212ENST00000519661 MEGF6O75095 1541 aa15.72■□□□□ 0.11
SPIDR-212ENST00000519661 KDRP35968 1356 aa15.72■□□□□ 0.11
SPIDR-212ENST00000519661 RGPD1P0DJD0 1748 aa15.71■□□□□ 0.11
SPIDR-212ENST00000519661 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.1
SPIDR-212ENST00000519661 PDE3BQ13370 1112 aa15.7■□□□□ 0.1
SPIDR-212ENST00000519661 EIF4A2Q14240 407 aaKnown RBP15.7■□□□□ 0.1
SPIDR-212ENST00000519661 MARCH10Q8NA82 808 aaPredicted RBP15.7■□□□□ 0.1
SPIDR-212ENST00000519661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.7■□□□□ 0.14e-7■■■■□ 22.5
SPIDR-212ENST00000519661 PARD3Q8TEW0 1356 aa15.7■□□□□ 0.1
SPIDR-212ENST00000519661 EXOC5O00471 708 aa15.69■□□□□ 0.1
SPIDR-212ENST00000519661 TNS1Q9HBL0 1735 aaKnown RBP15.68■□□□□ 0.1
SPIDR-212ENST00000519661 EYA1Q99502 592 aa15.68■□□□□ 0.1
SPIDR-212ENST00000519661 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
SPIDR-212ENST00000519661 RGPD2P0DJD1 1756 aa15.67■□□□□ 0.1
SPIDR-212ENST00000519661 A0A0G2JS52 829 aa15.67■□□□□ 0.1
SPIDR-212ENST00000519661 IL13P35225 146 aa15.67■□□□□ 0.1
SPIDR-212ENST00000519661 MYT1Q01538 1121 aa15.67■□□□□ 0.1
SPIDR-212ENST00000519661 SHANK3Q9BYB0 1731 aa15.67■□□□□ 0.1
SPIDR-212ENST00000519661 MTHFSP49914 203 aa15.66■□□□□ 0.1
SPIDR-212ENST00000519661 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
SPIDR-212ENST00000519661 RGPD3A6NKT7 1758 aaPredicted RBP15.66■□□□□ 0.1
SPIDR-212ENST00000519661 RGPD4Q7Z3J3 1758 aa15.66■□□□□ 0.1
SPIDR-212ENST00000519661 TNNT2P45379 298 aaPredicted RBP15.65■□□□□ 0.1
SPIDR-212ENST00000519661 CC2D1BQ5T0F9 858 aaKnown RBP15.65■□□□□ 0.1
SPIDR-212ENST00000519661 RAPGEF4Q8WZA2 1011 aa15.64■□□□□ 0.09
SPIDR-212ENST00000519661 BCL11BQ9C0K0 894 aaPredicted RBP15.64■□□□□ 0.09
SPIDR-212ENST00000519661 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
SPIDR-212ENST00000519661 PPM1GO15355 546 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms