RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 EN1Q05925 392 aaPredicted RBP20.34■□□□□ 0.85
SH3PXD2B-203ENST00000519643 FAM182BQ5T319 152 aa20.34■□□□□ 0.85
SH3PXD2B-203ENST00000519643 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
SH3PXD2B-203ENST00000519643 ZNF692Q9BU19 519 aaPredicted RBP20.34■□□□□ 0.85
SH3PXD2B-203ENST00000519643 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.84
SH3PXD2B-203ENST00000519643 DISP2A7MBM2 1401 aa20.33■□□□□ 0.84
SH3PXD2B-203ENST00000519643 SPATA31A5Q5VU36 1347 aa20.33■□□□□ 0.84
SH3PXD2B-203ENST00000519643 SPATA31A7Q8IWB4 1347 aa20.33■□□□□ 0.84
SH3PXD2B-203ENST00000519643 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.84
SH3PXD2B-203ENST00000519643 PNISRQ8TF01 805 aaKnown RBP20.33■□□□□ 0.84
SH3PXD2B-203ENST00000519643 NRKQ7Z2Y5 1582 aa20.32■□□□□ 0.84
SH3PXD2B-203ENST00000519643 ACEP12821 1306 aa20.32■□□□□ 0.84
SH3PXD2B-203ENST00000519643 FYB1O15117 783 aa20.32■□□□□ 0.84
SH3PXD2B-203ENST00000519643 POLR3AO14802 1390 aaPredicted RBP20.3■□□□□ 0.84
SH3PXD2B-203ENST00000519643 GGNBP2Q9H3C7 697 aa20.3■□□□□ 0.84
SH3PXD2B-203ENST00000519643 R3HDM1Q15032 1099 aaKnown RBP20.29■□□□□ 0.84
SH3PXD2B-203ENST00000519643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.29■□□□□ 0.84
SH3PXD2B-203ENST00000519643 USP6P35125 1406 aa20.29■□□□□ 0.84
SH3PXD2B-203ENST00000519643 SSH2Q76I76 1423 aa20.25■□□□□ 0.83
SH3PXD2B-203ENST00000519643 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
SH3PXD2B-203ENST00000519643 EZH2Q15910 746 aaKnown RBP20.25■□□□□ 0.83
SH3PXD2B-203ENST00000519643 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
SH3PXD2B-203ENST00000519643 TTC21BQ7Z4L5 1316 aa20.25■□□□□ 0.83
SH3PXD2B-203ENST00000519643 PRDM11Q9NQV5 511 aa20.24■□□□□ 0.83
SH3PXD2B-203ENST00000519643 NME9Q86XW9 330 aa20.23■□□□□ 0.83
SH3PXD2B-203ENST00000519643 CAMKK2Q96RR4 588 aa20.23■□□□□ 0.83
SH3PXD2B-203ENST00000519643 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
SH3PXD2B-203ENST00000519643 HNRNPUQ00839 825 aaKnown RBP eCLIP20.22■□□□□ 0.83
SH3PXD2B-203ENST00000519643 KIAA0232Q92628 1395 aa20.22■□□□□ 0.83
SH3PXD2B-203ENST00000519643 PHRF1Q9P1Y6 1649 aaKnown RBP20.21■□□□□ 0.83
SH3PXD2B-203ENST00000519643 TTC21AQ8NDW8 1320 aa20.21■□□□□ 0.83
SH3PXD2B-203ENST00000519643 INSRP06213 1382 aa20.21■□□□□ 0.83
SH3PXD2B-203ENST00000519643 PAK3O75914 559 aaPredicted RBP20.2■□□□□ 0.82
SH3PXD2B-203ENST00000519643 TRIM37O94972 964 aa20.2■□□□□ 0.82
SH3PXD2B-203ENST00000519643 CHRNA2Q15822 529 aa20.2■□□□□ 0.82
SH3PXD2B-203ENST00000519643 MTHFSP49914 203 aa20.19■□□□□ 0.82
SH3PXD2B-203ENST00000519643 COG3Q96JB2 828 aa20.19■□□□□ 0.82
SH3PXD2B-203ENST00000519643 FAM196AQ6ZSG2 479 aa20.18■□□□□ 0.82
SH3PXD2B-203ENST00000519643 RREB1Q92766 1687 aa20.17■□□□□ 0.82
SH3PXD2B-203ENST00000519643 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
SH3PXD2B-203ENST00000519643 OVOS2Q6IE36 1432 aa20.17■□□□□ 0.82
SH3PXD2B-203ENST00000519643 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
SH3PXD2B-203ENST00000519643 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
SH3PXD2B-203ENST00000519643 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
SH3PXD2B-203ENST00000519643 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
SH3PXD2B-203ENST00000519643 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
SH3PXD2B-203ENST00000519643 AATKQ6ZMQ8 1374 aa20.15■□□□□ 0.82
SH3PXD2B-203ENST00000519643 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
SH3PXD2B-203ENST00000519643 APBA3O96018 575 aa20.14■□□□□ 0.81
SH3PXD2B-203ENST00000519643 ZC3H6P61129 1189 aaKnown RBP20.14■□□□□ 0.81
SH3PXD2B-203ENST00000519643 USP54Q70EL1 1684 aa20.14■□□□□ 0.81
SH3PXD2B-203ENST00000519643 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
SH3PXD2B-203ENST00000519643 NUTM2GQ5VZR2 741 aa20.13■□□□□ 0.81
SH3PXD2B-203ENST00000519643 ADAMTS8Q9UP79 889 aa20.13■□□□□ 0.81
SH3PXD2B-203ENST00000519643 SMG6Q86US8 1419 aaKnown RBP20.13■□□□□ 0.81
SH3PXD2B-203ENST00000519643 COL3A1P02461 1466 aaPredicted RBP20.13■□□□□ 0.81
SH3PXD2B-203ENST00000519643 CAMTA1Q9Y6Y1 1673 aa20.12■□□□□ 0.81
SH3PXD2B-203ENST00000519643 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
SH3PXD2B-203ENST00000519643 ZBED9Q6R2W3 1325 aa20.12■□□□□ 0.81
SH3PXD2B-203ENST00000519643 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
SH3PXD2B-203ENST00000519643 LMO7Q8WWI1 1683 aa20.11■□□□□ 0.81
SH3PXD2B-203ENST00000519643 POLKQ9UBT6 870 aa20.1■□□□□ 0.81
SH3PXD2B-203ENST00000519643 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
SH3PXD2B-203ENST00000519643 FBLN1P23142 703 aa20.08■□□□□ 0.81
SH3PXD2B-203ENST00000519643 CPDO75976 1380 aa20.07■□□□□ 0.8
SH3PXD2B-203ENST00000519643 USP19O94966 1318 aa20.07■□□□□ 0.8
SH3PXD2B-203ENST00000519643 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
SH3PXD2B-203ENST00000519643 NLRP6P59044 892 aa20.06■□□□□ 0.8
SH3PXD2B-203ENST00000519643 TCP11L2Q8N4U5 519 aa20.06■□□□□ 0.8
SH3PXD2B-203ENST00000519643 ABTB2Q8N961 1025 aa20.06■□□□□ 0.8
SH3PXD2B-203ENST00000519643 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
SH3PXD2B-203ENST00000519643 EVA1CP58658 441 aa20.05■□□□□ 0.8
SH3PXD2B-203ENST00000519643 PARP4Q9UKK3 1724 aaKnown RBP20.04■□□□□ 0.8
SH3PXD2B-203ENST00000519643 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
SH3PXD2B-203ENST00000519643 PPM1GO15355 546 aaPredicted RBP20.03■□□□□ 0.8
SH3PXD2B-203ENST00000519643 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
SH3PXD2B-203ENST00000519643 YY1P25490 414 aa20.03■□□□□ 0.8
SH3PXD2B-203ENST00000519643 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
SH3PXD2B-203ENST00000519643 PEAK1Q9H792 1746 aa20.03■□□□□ 0.8
SH3PXD2B-203ENST00000519643 COL5A2P05997 1499 aaPredicted RBP20.02■□□□□ 0.8
SH3PXD2B-203ENST00000519643 NBPF14Q5TI25 921 aa20.02■□□□□ 0.8
SH3PXD2B-203ENST00000519643 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
SH3PXD2B-203ENST00000519643 THRAP3Q9Y2W1 955 aaKnown RBP20■□□□□ 0.79
SH3PXD2B-203ENST00000519643 U2AF1L5P0DN76 240 aaPredicted RBP19.99■□□□□ 0.79
SH3PXD2B-203ENST00000519643 U2AF1Q01081 240 aaKnown RBP eCLIP19.99■□□□□ 0.79
SH3PXD2B-203ENST00000519643 CCDC146Q8IYE0 955 aa19.99■□□□□ 0.79
SH3PXD2B-203ENST00000519643 SPON1Q9HCB6 807 aa19.99■□□□□ 0.79
SH3PXD2B-203ENST00000519643 SOX12O15370 315 aa19.98■□□□□ 0.79
SH3PXD2B-203ENST00000519643 KCNQ2O43526 872 aa19.98■□□□□ 0.79
SH3PXD2B-203ENST00000519643 MAP3K19Q56UN5 1328 aa19.98■□□□□ 0.79
SH3PXD2B-203ENST00000519643 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
SH3PXD2B-203ENST00000519643 GCP02774 474 aa19.97■□□□□ 0.79
SH3PXD2B-203ENST00000519643 LRRC37A3O60309 1634 aa19.97■□□□□ 0.79
SH3PXD2B-203ENST00000519643 SLIT3O75094 1523 aa19.97■□□□□ 0.79
SH3PXD2B-203ENST00000519643 NFAT5O94916 1531 aa19.97■□□□□ 0.79
SH3PXD2B-203ENST00000519643 RGPD3A6NKT7 1758 aaPredicted RBP19.97■□□□□ 0.79
SH3PXD2B-203ENST00000519643 RGPD4Q7Z3J3 1758 aa19.97■□□□□ 0.79
SH3PXD2B-203ENST00000519643 RUNDC1Q96C34 613 aa19.96■□□□□ 0.79
SH3PXD2B-203ENST00000519643 OVOS2A0A0G2JMS6 1433 aa19.96■□□□□ 0.79
SH3PXD2B-203ENST00000519643 CRB1P82279 1406 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms