RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 KCTD15Q96SI1 283 aaPredicted RBP7.16□□□□□ -1.26
SNORA40.12-201ENST00000516329 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
SNORA40.12-201ENST00000516329 TBC1D2BQ9UPU7 963 aa7.16□□□□□ -1.26
SNORA40.12-201ENST00000516329 SOCS7O14512 581 aa7.15□□□□□ -1.26
SNORA40.12-201ENST00000516329 MCM6Q14566 821 aa7.15□□□□□ -1.26
SNORA40.12-201ENST00000516329 CCDC116Q8IYX3 515 aa7.15□□□□□ -1.26
SNORA40.12-201ENST00000516329 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
SNORA40.12-201ENST00000516329 INTS6LQ5JSJ4 861 aaKnown RBP7.14□□□□□ -1.27
SNORA40.12-201ENST00000516329 TRIM46Q7Z4K8 759 aa7.14□□□□□ -1.27
SNORA40.12-201ENST00000516329 KLF16Q9BXK1 252 aaPredicted RBP7.14□□□□□ -1.27
SNORA40.12-201ENST00000516329 CDV3Q9UKY7 258 aaKnown RBP7.14□□□□□ -1.27
SNORA40.12-201ENST00000516329 C11orf95C9JLR9 678 aaPredicted RBP7.13□□□□□ -1.27
SNORA40.12-201ENST00000516329 NR1H3Q13133 447 aa7.13□□□□□ -1.27
SNORA40.12-201ENST00000516329 TMEM132AQ24JP5 1023 aa7.13□□□□□ -1.27
SNORA40.12-201ENST00000516329 NBPF20Q3BBV1 942 aa7.13□□□□□ -1.27
SNORA40.12-201ENST00000516329 PPP1R26Q5T8A7 1209 aaPredicted RBP7.13□□□□□ -1.27
SNORA40.12-201ENST00000516329 GDPD2Q9HCC8 539 aa7.13□□□□□ -1.27
SNORA40.12-201ENST00000516329 PRM3Q9NNZ6 103 aa7.12□□□□□ -1.27
SNORA40.12-201ENST00000516329 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
SNORA40.12-201ENST00000516329 ABL2P42684 1182 aa7.11□□□□□ -1.27
SNORA40.12-201ENST00000516329 MRPL14Q6P1L8 145 aaKnown RBP7.11□□□□□ -1.27
SNORA40.12-201ENST00000516329 PURBQ96QR8 312 aaKnown RBP7.11□□□□□ -1.27
SNORA40.12-201ENST00000516329 EMILIN1Q9Y6C2 1016 aa7.11□□□□□ -1.27
SNORA40.12-201ENST00000516329 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
SNORA40.12-201ENST00000516329 TRIM47Q96LD4 638 aa7.1□□□□□ -1.27
SNORA40.12-201ENST00000516329 SENP2Q9HC62 589 aa7.1□□□□□ -1.27
SNORA40.12-201ENST00000516329 TMPRSS4Q9NRS4 437 aa7.1□□□□□ -1.27
SNORA40.12-201ENST00000516329 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
SNORA40.12-201ENST00000516329 GIGYF1O75420 1035 aaPredicted RBP7.09□□□□□ -1.27
SNORA40.12-201ENST00000516329 DHX9Q08211 1270 aaKnown RBP7.09□□□□□ -1.27
SNORA40.12-201ENST00000516329 CBLBQ13191 982 aa7.09□□□□□ -1.27
SNORA40.12-201ENST00000516329 IRF5Q13568 498 aa7.09□□□□□ -1.27
SNORA40.12-201ENST00000516329 MEIOBQ8N635 442 aa7.09□□□□□ -1.27
SNORA40.12-201ENST00000516329 ZFP42Q96MM3 310 aa7.09□□□□□ -1.27
SNORA40.12-201ENST00000516329 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
SNORA40.12-201ENST00000516329 VAC14Q08AM6 782 aa7.08□□□□□ -1.28
SNORA40.12-201ENST00000516329 SCARF1Q14162 830 aa7.08□□□□□ -1.28
SNORA40.12-201ENST00000516329 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
SNORA40.12-201ENST00000516329 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
SNORA40.12-201ENST00000516329 ESPNB1AK53 854 aa7.07□□□□□ -1.28
SNORA40.12-201ENST00000516329 BMP2P12643 396 aa7.07□□□□□ -1.28
SNORA40.12-201ENST00000516329 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
SNORA40.12-201ENST00000516329 ZNF784Q8NCA9 323 aaPredicted RBP7.07□□□□□ -1.28
SNORA40.12-201ENST00000516329 POM121Q96HA1 1249 aa7.07□□□□□ -1.28
SNORA40.12-201ENST00000516329 UPP2O95045 317 aa7.06□□□□□ -1.28
SNORA40.12-201ENST00000516329 CYLDQ9NQC7 956 aa7.06□□□□□ -1.28
SNORA40.12-201ENST00000516329 COG6Q9Y2V7 657 aa7.06□□□□□ -1.28
SNORA40.12-201ENST00000516329 UBTFP17480 764 aaKnown RBP7.05□□□□□ -1.28
SNORA40.12-201ENST00000516329 ZNF775Q96BV0 537 aaPredicted RBP7.05□□□□□ -1.28
SNORA40.12-201ENST00000516329 AGBL1Q96MI9 1066 aa7.05□□□□□ -1.28
SNORA40.12-201ENST00000516329 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
SNORA40.12-201ENST00000516329 RELBQ01201 579 aa7.04□□□□□ -1.28
SNORA40.12-201ENST00000516329 FLIIQ13045 1269 aa7.04□□□□□ -1.28
SNORA40.12-201ENST00000516329 SEPT12Q8IYM1 358 aa7.04□□□□□ -1.28
SNORA40.12-201ENST00000516329 MCCD1P59942 119 aaPredicted RBP7.03□□□□□ -1.28
SNORA40.12-201ENST00000516329 EIF4G2P78344 907 aaKnown RBP eCLIP7.03□□□□□ -1.28
SNORA40.12-201ENST00000516329 Q6ZVU0 165 aa7.03□□□□□ -1.28
SNORA40.12-201ENST00000516329 ZNF592Q92610 1267 aa7.03□□□□□ -1.28
SNORA40.12-201ENST00000516329 TSEN34Q9BSV6 310 aaKnown RBP7.03□□□□□ -1.28
SNORA40.12-201ENST00000516329 PCDHB11Q9Y5F2 797 aa7.03□□□□□ -1.28
SNORA40.12-201ENST00000516329 RAD21O60216 631 aa7.02□□□□□ -1.29
SNORA40.12-201ENST00000516329 LILRA1O75019 489 aa7.02□□□□□ -1.29
SNORA40.12-201ENST00000516329 ADD1P35611 737 aaKnown RBP7.02□□□□□ -1.29
SNORA40.12-201ENST00000516329 MAN1A2O60476 641 aa7.01□□□□□ -1.29
SNORA40.12-201ENST00000516329 ADH1AP07327 375 aa7.01□□□□□ -1.29
SNORA40.12-201ENST00000516329 WASHC4Q2M389 1173 aa7.01□□□□□ -1.29
SNORA40.12-201ENST00000516329 RNF20Q5VTR2 975 aa7.01□□□□□ -1.29
SNORA40.12-201ENST00000516329 ZNF395Q9H8N7 513 aaPredicted RBP7.01□□□□□ -1.29
SNORA40.12-201ENST00000516329 CEP126Q9P2H0 1117 aa7.01□□□□□ -1.29
SNORA40.12-201ENST00000516329 SCTRP47872 440 aa7□□□□□ -1.29
SNORA40.12-201ENST00000516329 CCDC85AQ96PX6 553 aaPredicted RBP7□□□□□ -1.29
SNORA40.12-201ENST00000516329 WWC1Q8IX03 1113 aa6.99□□□□□ -1.29
SNORA40.12-201ENST00000516329 CLUAP1Q96AJ1 413 aa6.99□□□□□ -1.29
SNORA40.12-201ENST00000516329 INSM2Q96T92 566 aaPredicted RBP6.99□□□□□ -1.29
SNORA40.12-201ENST00000516329 POLMQ9NP87 494 aaPredicted RBP6.99□□□□□ -1.29
SNORA40.12-201ENST00000516329 DNMT3LQ9UJW3 386 aa6.99□□□□□ -1.29
SNORA40.12-201ENST00000516329 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
SNORA40.12-201ENST00000516329 FIGNL2A6NMB9 653 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 SPINT1O43278 529 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 VEGFBP49765 207 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 ERVK-9P63128 1117 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 SEMA3FQ13275 785 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 SLFNL1Q499Z3 407 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 CC2D2BQ6DHV5 1058 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 RNF135Q8IUD6 432 aa6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 CDCA7Q9BWT1 371 aaPredicted RBP6.98□□□□□ -1.29
SNORA40.12-201ENST00000516329 CTSOP43234 321 aaPredicted RBP6.97□□□□□ -1.29
SNORA40.12-201ENST00000516329 TSGA10IPQ3SY00 556 aa6.97□□□□□ -1.29
SNORA40.12-201ENST00000516329 KDF1Q8NAX2 398 aaPredicted RBP6.97□□□□□ -1.29
SNORA40.12-201ENST00000516329 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
SNORA40.12-201ENST00000516329 POM121CA8CG34 1229 aa6.96□□□□□ -1.3
SNORA40.12-201ENST00000516329 ATP5J2-PTCD1G3V325 749 aa6.96□□□□□ -1.3
SNORA40.12-201ENST00000516329 PTGIRP43119 386 aa6.96□□□□□ -1.3
SNORA40.12-201ENST00000516329 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.3
SNORA40.12-201ENST00000516329 CCDC125Q86Z20 511 aa6.96□□□□□ -1.3
SNORA40.12-201ENST00000516329 TRIM52Q96A61 297 aa6.96□□□□□ -1.3
SNORA40.12-201ENST00000516329 ESF1Q9H501 851 aaKnown RBP6.96□□□□□ -1.3
SNORA40.12-201ENST00000516329 MEN1O00255 615 aa6.95□□□□□ -1.3
SNORA40.12-201ENST00000516329 TERTO14746 1132 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms