RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 DEPDC4Q8N2C3 294 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ARMC2Q8NEN0 867 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SPATA32Q96LK8 384 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NOD1Q9Y239 953 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 TTBK1Q5TCY1 1321 aaPredicted RBP3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 H3BRB1 525 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SMAPO00193 183 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CFHP08603 1231 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PTK2Q05397 1052 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FUT2Q10981 343 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 COL19A1Q14993 1142 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 EAPPQ56P03 285 aaPredicted RBP3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ARSIQ5FYB1 569 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 OGFOD1Q8N543 542 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PLPP7Q8NBV4 271 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 HLA-CQ95604 372 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PRR14Q9BWN1 585 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 TUT1Q9H6E5 874 aaKnown RBP3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 DNAAF2Q9NVR5 837 aaKnown RBP3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 RGS17Q9UGC6 210 aaPredicted RBP3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 GPSM3Q9Y4H4 160 aa3.98□□□□□ -1.77
SCARNA17.1-201ENST00000516211 TSPOAP1O95153 1857 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 RNF40O75150 1001 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SLC10A3P09131 477 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ERCC5P28715 1186 aaPredicted RBP3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 DPYDQ12882 1025 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SF3B2Q13435 895 aaKnown RBP3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 TSNAXIP1Q2TAA8 658 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NAALADL2Q58DX5 795 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 LYPD8Q6UX82 237 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 LARGE2Q8N3Y3 721 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 GPKOWQ92917 476 aaPredicted RBP eCLIP3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ZNF594Q96JF6 807 aaPredicted RBP3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ASB16Q96NS5 453 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 DCTN4Q9UJW0 460 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PCDHB9Q9Y5E1 797 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FANCD2Q9BXW9 1451 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CEP164Q9UPV0 1460 aa3.97□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PER1O15534 1290 aaPredicted RBP3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 C21orf2O43822 256 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 SMARCA5O60264 1052 aaPredicted RBP3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 ICMTO60725 284 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 CTHP32929 405 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 SEC13P55735 322 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 NBPF14Q5TI25 921 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 ANKRD13AQ8IZ07 590 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 KIAA1468Q9P260 1216 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 CEP126Q9P2H0 1117 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 METRNQ9UJH8 293 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 LHX6Q9UPM6 363 aa3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 EIF4G3O43432 1585 aaKnown RBP3.96□□□□□ -1.78
SCARNA17.1-201ENST00000516211 HMGXB3Q12766 1538 aa3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 ABCC10Q5T3U5 1492 aa3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 SCAMP3O14828 347 aaKnown RBP3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 PRMT3O60678 531 aa3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 PTCD1O75127 700 aaKnown RBP3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 PSME1Q06323 249 aa3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 ZNF211Q13398 564 aaPredicted RBP3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 FAM174AQ8TBP5 190 aa3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 SYMPKQ92797 1274 aaKnown RBP3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 KCNK17Q96T54 332 aa3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 MRS2Q9HD23 443 aa3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 CXXC1Q9P0U4 656 aaPredicted RBP3.95□□□□□ -1.78
SCARNA17.1-201ENST00000516211 SNAPC4Q5SXM2 1469 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 BAZ1BQ9UIG0 1483 aaKnown RBP3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 C3orf80F5H4A9 247 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 RECKO95980 971 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 XPCQ01831 940 aaPredicted RBP3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 FKBP4Q02790 459 aaKnown RBP eCLIP3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 GNL2Q13823 731 aaKnown RBP3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 FAM98CQ17RN3 349 aaKnown RBP3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 PROX2Q3B8N5 592 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 RNF20Q5VTR2 975 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 PDXDC2PQ6P474 469 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 FBXO33Q7Z6M2 555 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 RGL4Q8IZJ4 473 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 SIX5Q8N196 739 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 USB1Q9BQ65 265 aaKnown RBP3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 RABGEF1Q9UJ41 708 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 DOLKQ9UPQ8 538 aa3.94□□□□□ -1.78
SCARNA17.1-201ENST00000516211 MED1Q15648 1581 aaPredicted RBP3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 ANKRD62A6NC57 917 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 EIF5BO60841 1220 aaKnown RBP3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 FMNL1O95466 1100 aaPredicted RBP3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 PTPRNQ16849 979 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 TAS1R3Q7RTX0 852 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 ZBTB33Q86T24 672 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 GTF3C2Q8WUA4 911 aaPredicted RBP3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 KHSRPQ92945 711 aaKnown RBP eCLIP3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 TRIM52Q96A61 297 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 HINFPQ9BQA5 517 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 POLR3GLQ9BT43 218 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 ANO2Q9NQ90 1003 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 SLAIN2Q9P270 581 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 TMA7Q9Y2S6 64 aaKnown RBP3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 DIP2BQ9P265 1576 aa3.93□□□□□ -1.78
SCARNA17.1-201ENST00000516211 NDUFB5O43674 189 aa3.92□□□□□ -1.78
SCARNA17.1-201ENST00000516211 FAM13AO94988 1023 aa3.92□□□□□ -1.78
SCARNA17.1-201ENST00000516211 HSPA1LP34931 641 aa3.92□□□□□ -1.78
SCARNA17.1-201ENST00000516211 GTF2IP78347 998 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms