RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
TRIM41-207ENST00000515223 KDM4AO75164 1064 aa19.09■□□□□ 0.65
TRIM41-207ENST00000515223 SLC4A2P04920 1241 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 SYCP1Q15431 976 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 SRCIN1Q9C0H9 1055 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 CCT4P50991 539 aaKnown RBP19.08■□□□□ 0.65
TRIM41-207ENST00000515223 PTPN23Q9H3S7 1636 aa19.08■□□□□ 0.64
TRIM41-207ENST00000515223 ZSCAN29Q8IWY8 852 aaPredicted RBP19.07■□□□□ 0.64
TRIM41-207ENST00000515223 TRIM22Q8IYM9 498 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 ANKRD30BQ9BXX2 1392 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 TMOD2Q9NZR1 351 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
TRIM41-207ENST00000515223 RBM10P98175 930 aaKnown RBP19.07■□□□□ 0.64
TRIM41-207ENST00000515223 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 MAGEC2Q9UBF1 373 aaPredicted RBP19.06■□□□□ 0.64
TRIM41-207ENST00000515223 C9orf84Q5VXU9 1444 aa19.06■□□□□ 0.64
TRIM41-207ENST00000515223 MCM2P49736 904 aa19.06■□□□□ 0.64
TRIM41-207ENST00000515223 HECW1Q76N89 1606 aa19.06■□□□□ 0.64
TRIM41-207ENST00000515223 NOB1Q9ULX3 412 aaKnown RBP19.06■□□□□ 0.64
TRIM41-207ENST00000515223 KINO60870 393 aaKnown RBP19.05■□□□□ 0.64
TRIM41-207ENST00000515223 AK7Q96M32 723 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 GRPEL1Q9HAV7 217 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 FILIP1LQ4L180 1135 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 MYL6BP14649 208 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 JMYQ8N9B5 988 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 ACBD3Q9H3P7 528 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 PDILTQ8N807 584 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 MNS1Q8NEH6 495 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 WDHD1O75717 1129 aaPredicted RBP19.05■□□□□ 0.64
TRIM41-207ENST00000515223 ZNF396Q96N95 335 aaPredicted RBP19.04■□□□□ 0.64
TRIM41-207ENST00000515223 PATL2C9JE40 543 aaKnown RBP19.04■□□□□ 0.64
TRIM41-207ENST00000515223 SLFN5Q08AF3 891 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 CEP126Q9P2H0 1117 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 RPGRIP1LQ68CZ1 1315 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 STARD3NLO95772 234 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 GCC1Q96CN9 775 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 MYO6Q9UM54 1294 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
TRIM41-207ENST00000515223 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
TRIM41-207ENST00000515223 MCM4P33991 863 aa19.03■□□□□ 0.64
TRIM41-207ENST00000515223 KCNH5Q8NCM2 988 aa19.03■□□□□ 0.64
TRIM41-207ENST00000515223 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
TRIM41-207ENST00000515223 PDCL3Q9H2J4 239 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 PRPF40AO75400 957 aaKnown RBP19.02■□□□□ 0.64
TRIM41-207ENST00000515223 STK38Q15208 465 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 SIL1Q9H173 461 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 MPHOSPH10O00566 681 aaKnown RBP19.02■□□□□ 0.64
TRIM41-207ENST00000515223 NESP48681 1621 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 IFT57Q9NWB7 429 aa19.02■□□□□ 0.63
TRIM41-207ENST00000515223 CCDC69A6NI79 296 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 NEK4P51957 841 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 MAP3K1Q13233 1512 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 ARGLU1Q9NWB6 273 aaPredicted RBP19.01■□□□□ 0.63
TRIM41-207ENST00000515223 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
TRIM41-207ENST00000515223 ZC3H6P61129 1189 aaKnown RBP19.01■□□□□ 0.63
TRIM41-207ENST00000515223 TEX35Q5T0J7 233 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 SMARCE1Q969G3 411 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 BTBD11A6QL63 1104 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 BICDL1Q6ZP65 573 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 ANKRD1Q15327 319 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 CAGE1Q8TC20 777 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 LRRCC1Q9C099 1032 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 ZNF771Q7L3S4 317 aaPredicted RBP18.99■□□□□ 0.63
TRIM41-207ENST00000515223 MVPQ14764 893 aaKnown RBP18.99■□□□□ 0.63
TRIM41-207ENST00000515223 RAI14Q9P0K7 980 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 PKNOX2Q96KN3 472 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 CYP46A1Q9Y6A2 500 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 LETM1O95202 739 aaPredicted RBP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 STIM1Q13586 685 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 ZHX3Q9H4I2 956 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 CCDC39Q9UFE4 941 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 CTNNA3Q9UI47 895 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 TDO2P48775 406 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 HSP90B2PQ58FF3 399 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 NUP133Q8WUM0 1156 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 LRP2BPQ9P2M1 347 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 NOL7Q9UMY1 257 aaKnown RBP18.97■□□□□ 0.63
TRIM41-207ENST00000515223 CT47B1P0C2W7 299 aaPredicted RBP18.97■□□□□ 0.63
TRIM41-207ENST00000515223 UBAC1Q9BSL1 405 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 ZPR1O75312 459 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 STK11IPQ8N1F8 1099 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 MPNDQ8N594 471 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 MRC2Q9UBG0 1479 aa18.96■□□□□ 0.63
TRIM41-207ENST00000515223 BMP2KQ9NSY1 1161 aaPredicted RBP18.96■□□□□ 0.63
TRIM41-207ENST00000515223 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
TRIM41-207ENST00000515223 RABEP1Q15276 862 aa18.96■□□□□ 0.63
TRIM41-207ENST00000515223 MBD3O95983 291 aa18.95■□□□□ 0.62
TRIM41-207ENST00000515223 ZNHIT6Q9NWK9 470 aaKnown RBP18.95■□□□□ 0.62
TRIM41-207ENST00000515223 LUC7LQ9NQ29 371 aaKnown RBP18.95■□□□□ 0.62
TRIM41-207ENST00000515223 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
TRIM41-207ENST00000515223 CDKL5O76039 1030 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms