RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 RGPD5Q99666 1765 aa17.11■□□□□ 0.33
COPB2-212ENST00000514508 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
COPB2-212ENST00000514508 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
COPB2-212ENST00000514508 PANK3Q9H999 370 aa17.1■□□□□ 0.33
COPB2-212ENST00000514508 CGNL1Q0VF96 1302 aa17.09■□□□□ 0.33
COPB2-212ENST00000514508 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
COPB2-212ENST00000514508 LARP1Q6PKG0 1096 aaKnown RBP17.08■□□□□ 0.32
COPB2-212ENST00000514508 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.32
COPB2-212ENST00000514508 CRB1P82279 1406 aa17.06■□□□□ 0.32
COPB2-212ENST00000514508 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
COPB2-212ENST00000514508 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
COPB2-212ENST00000514508 BRWD3Q6RI45 1802 aa17.06■□□□□ 0.32
COPB2-212ENST00000514508 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
COPB2-212ENST00000514508 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
COPB2-212ENST00000514508 ANKRD26Q9UPS8 1709 aa17.05■□□□□ 0.32
COPB2-212ENST00000514508 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
COPB2-212ENST00000514508 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
COPB2-212ENST00000514508 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
COPB2-212ENST00000514508 A0A0G2JS52 829 aa17.04■□□□□ 0.32
COPB2-212ENST00000514508 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
COPB2-212ENST00000514508 MYT1Q01538 1121 aa17.04■□□□□ 0.32
COPB2-212ENST00000514508 BARGINQ6ZT62 677 aa17.04■□□□□ 0.32
COPB2-212ENST00000514508 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
COPB2-212ENST00000514508 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
COPB2-212ENST00000514508 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
COPB2-212ENST00000514508 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
COPB2-212ENST00000514508 MAP3K19Q56UN5 1328 aa17.03■□□□□ 0.32
COPB2-212ENST00000514508 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
COPB2-212ENST00000514508 IP6K1Q92551 441 aa17.03■□□□□ 0.32
COPB2-212ENST00000514508 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
COPB2-212ENST00000514508 NSD2O96028 1365 aa17.02■□□□□ 0.32
COPB2-212ENST00000514508 FBLN1P23142 703 aa17.02■□□□□ 0.32
COPB2-212ENST00000514508 AMPHP49418 695 aa17.02■□□□□ 0.32
COPB2-212ENST00000514508 RTL1A6NKG5 1358 aa17.02■□□□□ 0.31
COPB2-212ENST00000514508 ERBB3P21860 1342 aa17.01■□□□□ 0.31
COPB2-212ENST00000514508 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
COPB2-212ENST00000514508 HOXC9P31274 260 aa17■□□□□ 0.31
COPB2-212ENST00000514508 RRS1Q15050 365 aaKnown RBP17■□□□□ 0.31
COPB2-212ENST00000514508 CARD10Q9BWT7 1032 aa17■□□□□ 0.31
COPB2-212ENST00000514508 FAM208AQ9UK61 1670 aaKnown RBP17■□□□□ 0.31
COPB2-212ENST00000514508 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
COPB2-212ENST00000514508 KRT27Q7Z3Y8 459 aa16.99■□□□□ 0.31
COPB2-212ENST00000514508 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
COPB2-212ENST00000514508 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
COPB2-212ENST00000514508 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
COPB2-212ENST00000514508 UPF1Q92900 1129 aaKnown RBP eCLIP16.98■□□□□ 0.31
COPB2-212ENST00000514508 PER1O15534 1290 aaPredicted RBP16.97■□□□□ 0.31
COPB2-212ENST00000514508 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
COPB2-212ENST00000514508 FLT4P35916 1363 aa16.97■□□□□ 0.31
COPB2-212ENST00000514508 PEAK1Q9H792 1746 aa16.96■□□□□ 0.31
COPB2-212ENST00000514508 AMER1Q5JTC6 1135 aaPredicted RBP16.96■□□□□ 0.31
COPB2-212ENST00000514508 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
COPB2-212ENST00000514508 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
COPB2-212ENST00000514508 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
COPB2-212ENST00000514508 INSRP06213 1382 aa16.94■□□□□ 0.3
COPB2-212ENST00000514508 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
COPB2-212ENST00000514508 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
COPB2-212ENST00000514508 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
COPB2-212ENST00000514508 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
COPB2-212ENST00000514508 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
COPB2-212ENST00000514508 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
COPB2-212ENST00000514508 CCDC125Q86Z20 511 aa16.93■□□□□ 0.3
COPB2-212ENST00000514508 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
COPB2-212ENST00000514508 LRRC37A3O60309 1634 aa16.92■□□□□ 0.3
COPB2-212ENST00000514508 PPM1GO15355 546 aaPredicted RBP16.92■□□□□ 0.3
COPB2-212ENST00000514508 DDB1Q16531 1140 aa16.92■□□□□ 0.3
COPB2-212ENST00000514508 DISP2A7MBM2 1401 aa16.92■□□□□ 0.3
COPB2-212ENST00000514508 NPC1L1Q9UHC9 1359 aa16.91■□□□□ 0.3
COPB2-212ENST00000514508 IL2RBP14784 551 aa16.9■□□□□ 0.3
COPB2-212ENST00000514508 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
COPB2-212ENST00000514508 EXOC5O00471 708 aa16.88■□□□□ 0.29
COPB2-212ENST00000514508 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
COPB2-212ENST00000514508 FAM182BQ5T319 152 aa16.88■□□□□ 0.29
COPB2-212ENST00000514508 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
COPB2-212ENST00000514508 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
COPB2-212ENST00000514508 EP400Q96L91 3159 aa16.87■□□□□ 0.29
COPB2-212ENST00000514508 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
COPB2-212ENST00000514508 RGPD1P0DJD0 1748 aa16.86■□□□□ 0.29
COPB2-212ENST00000514508 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
COPB2-212ENST00000514508 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
COPB2-212ENST00000514508 MARCH10Q8NA82 808 aaPredicted RBP16.83■□□□□ 0.28
COPB2-212ENST00000514508 SBF2Q86WG5 1849 aa16.82■□□□□ 0.28
COPB2-212ENST00000514508 BCL9O00512 1426 aa16.82■□□□□ 0.28
COPB2-212ENST00000514508 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
COPB2-212ENST00000514508 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
COPB2-212ENST00000514508 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
COPB2-212ENST00000514508 MEGF6O75095 1541 aa16.81■□□□□ 0.28
COPB2-212ENST00000514508 NCAPD2Q15021 1401 aa16.81■□□□□ 0.28
COPB2-212ENST00000514508 MTHFSP49914 203 aa16.81■□□□□ 0.28
COPB2-212ENST00000514508 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
COPB2-212ENST00000514508 EYA1Q99502 592 aa16.81■□□□□ 0.28
COPB2-212ENST00000514508 TNS1Q9HBL0 1735 aaKnown RBP16.81■□□□□ 0.28
COPB2-212ENST00000514508 TRIM37O94972 964 aa16.8■□□□□ 0.28
COPB2-212ENST00000514508 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
COPB2-212ENST00000514508 BAG6P46379 1132 aa16.79■□□□□ 0.28
COPB2-212ENST00000514508 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
COPB2-212ENST00000514508 KAT6BQ8WYB5 2073 aa16.78■□□□□ 0.28
COPB2-212ENST00000514508 SHANK3Q9BYB0 1731 aa16.78■□□□□ 0.28
COPB2-212ENST00000514508 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
COPB2-212ENST00000514508 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms