RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 OVOS2Q6IE36 1432 aa26.46■■□□□ 1.83
LPCAT1-206ENST00000514484 WNK3Q9BYP7 1800 aa26.46■■□□□ 1.83
LPCAT1-206ENST00000514484 ANKRD36BQ8N2N9 1353 aa26.46■■□□□ 1.83
LPCAT1-206ENST00000514484 FAM182BQ5T319 152 aa26.45■■□□□ 1.82
LPCAT1-206ENST00000514484 AXIN2Q9Y2T1 843 aa26.45■■□□□ 1.82
LPCAT1-206ENST00000514484 CRB1P82279 1406 aa26.43■■□□□ 1.82
LPCAT1-206ENST00000514484 KIF20BQ96Q89 1820 aa26.43■■□□□ 1.82
LPCAT1-206ENST00000514484 PARP4Q9UKK3 1724 aaKnown RBP26.42■■□□□ 1.82
LPCAT1-206ENST00000514484 BLMP54132 1417 aaPredicted RBP26.41■■□□□ 1.82
LPCAT1-206ENST00000514484 TCP11L2Q8N4U5 519 aa26.41■■□□□ 1.82
LPCAT1-206ENST00000514484 ABCC6O95255 1503 aa26.4■■□□□ 1.82
LPCAT1-206ENST00000514484 CDCA8Q53HL2 280 aa26.4■■□□□ 1.82
LPCAT1-206ENST00000514484 BARGINQ6ZT62 677 aa26.39■■□□□ 1.82
LPCAT1-206ENST00000514484 TOM1L2Q6ZVM7 507 aa26.38■■□□□ 1.81
LPCAT1-206ENST00000514484 WDR17Q8IZU2 1322 aa26.38■■□□□ 1.81
LPCAT1-206ENST00000514484 RGPD1P0DJD0 1748 aa26.37■■□□□ 1.81
LPCAT1-206ENST00000514484 LRRC37A3O60309 1634 aa26.37■■□□□ 1.81
LPCAT1-206ENST00000514484 HSPA5P11021 654 aaKnown RBP26.37■■□□□ 1.81
LPCAT1-206ENST00000514484 EIF4G2P78344 907 aaKnown RBP eCLIP26.36■■□□□ 1.813e-6■■■■■ 33.2
LPCAT1-206ENST00000514484 TNS1Q9HBL0 1735 aaKnown RBP26.36■■□□□ 1.81
LPCAT1-206ENST00000514484 CCDC125Q86Z20 511 aa26.35■■□□□ 1.81
LPCAT1-206ENST00000514484 POLR3GLQ9BT43 218 aa26.35■■□□□ 1.81
LPCAT1-206ENST00000514484 THRAP3Q9Y2W1 955 aaKnown RBP26.35■■□□□ 1.81
LPCAT1-206ENST00000514484 CSB-PGBD3P0DP91 1061 aa26.34■■□□□ 1.81
LPCAT1-206ENST00000514484 DEFB132Q7Z7B7 95 aa26.33■■□□□ 1.81
LPCAT1-206ENST00000514484 COG3Q96JB2 828 aa26.33■■□□□ 1.81
LPCAT1-206ENST00000514484 SF3B2Q13435 895 aaKnown RBP26.31■■□□□ 1.8
LPCAT1-206ENST00000514484 GGNBP2Q9H3C7 697 aa26.31■■□□□ 1.8
LPCAT1-206ENST00000514484 NSD3Q9BZ95 1437 aa26.31■■□□□ 1.8
LPCAT1-206ENST00000514484 FBLN1P23142 703 aa26.3■■□□□ 1.8
LPCAT1-206ENST00000514484 PDE3BQ13370 1112 aa26.29■■□□□ 1.8
LPCAT1-206ENST00000514484 FYB1O15117 783 aa26.28■■□□□ 1.8
LPCAT1-206ENST00000514484 CARD14Q9BXL6 1004 aa26.28■■□□□ 1.8
LPCAT1-206ENST00000514484 ERBB3P21860 1342 aa26.28■■□□□ 1.8
LPCAT1-206ENST00000514484 CARD10Q9BWT7 1032 aa26.27■■□□□ 1.8
LPCAT1-206ENST00000514484 RGPD2P0DJD1 1756 aa26.27■■□□□ 1.8
LPCAT1-206ENST00000514484 PEAK1Q9H792 1746 aa26.26■■□□□ 1.79
LPCAT1-206ENST00000514484 DISP2A7MBM2 1401 aa26.25■■□□□ 1.79
LPCAT1-206ENST00000514484 MAP3K19Q56UN5 1328 aa26.25■■□□□ 1.79
LPCAT1-206ENST00000514484 ANKRD24Q8TF21 1146 aa26.25■■□□□ 1.79
LPCAT1-206ENST00000514484 SBF2Q86WG5 1849 aa26.25■■□□□ 1.79
LPCAT1-206ENST00000514484 FAM208AQ9UK61 1670 aaKnown RBP26.25■■□□□ 1.79
LPCAT1-206ENST00000514484 FAM196AQ6ZSG2 479 aa26.24■■□□□ 1.79
LPCAT1-206ENST00000514484 TRIM37O94972 964 aa26.23■■□□□ 1.79
LPCAT1-206ENST00000514484 NLRP2Q9NX02 1062 aa26.23■■□□□ 1.79
LPCAT1-206ENST00000514484 CCDC7Q96M83 1385 aa26.22■■□□□ 1.79
LPCAT1-206ENST00000514484 RRS1Q15050 365 aaKnown RBP26.22■■□□□ 1.79
LPCAT1-206ENST00000514484 DDB1Q16531 1140 aa26.22■■□□□ 1.79
LPCAT1-206ENST00000514484 BAG6P46379 1132 aa26.21■■□□□ 1.79
LPCAT1-206ENST00000514484 IP6K1Q92551 441 aa26.21■■□□□ 1.79
LPCAT1-206ENST00000514484 LTV1Q96GA3 475 aaPredicted RBP26.21■■□□□ 1.79
LPCAT1-206ENST00000514484 ANKRD26Q9UPS8 1709 aa26.19■■□□□ 1.78
LPCAT1-206ENST00000514484 C11orf95C9JLR9 678 aaPredicted RBP26.19■■□□□ 1.78
LPCAT1-206ENST00000514484 HOXC9P31274 260 aa26.19■■□□□ 1.78
LPCAT1-206ENST00000514484 AMPHP49418 695 aa26.19■■□□□ 1.78
LPCAT1-206ENST00000514484 OVOS2A0A0G2JMS6 1433 aa26.19■■□□□ 1.78
LPCAT1-206ENST00000514484 EN1Q05925 392 aaPredicted RBP26.18■■□□□ 1.78
LPCAT1-206ENST00000514484 TNS2Q63HR2 1409 aa26.17■■□□□ 1.78
LPCAT1-206ENST00000514484 CDCA7Q9BWT1 371 aaPredicted RBP26.17■■□□□ 1.78
LPCAT1-206ENST00000514484 RTL1A6NKG5 1358 aa26.16■■□□□ 1.78
LPCAT1-206ENST00000514484 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
LPCAT1-206ENST00000514484 MARCH10Q8NA82 808 aaPredicted RBP26.14■■□□□ 1.78
LPCAT1-206ENST00000514484 CGNL1Q0VF96 1302 aa26.14■■□□□ 1.77
LPCAT1-206ENST00000514484 KAT6BQ8WYB5 2073 aa26.12■■□□□ 1.77
LPCAT1-206ENST00000514484 APBA3O96018 575 aa26.12■■□□□ 1.77
LPCAT1-206ENST00000514484 RREB1Q92766 1687 aa26.12■■□□□ 1.77
LPCAT1-206ENST00000514484 IL2RBP14784 551 aa26.11■■□□□ 1.77
LPCAT1-206ENST00000514484 EZH2Q15910 746 aaKnown RBP26.11■■□□□ 1.77
LPCAT1-206ENST00000514484 PANK3Q9H999 370 aa26.11■■□□□ 1.77
LPCAT1-206ENST00000514484 EXOC5O00471 708 aa26.1■■□□□ 1.77
LPCAT1-206ENST00000514484 EMILIN1Q9Y6C2 1016 aa26.09■■□□□ 1.77
LPCAT1-206ENST00000514484 NUP188Q5SRE5 1749 aa26.08■■□□□ 1.77
LPCAT1-206ENST00000514484 KIF7Q2M1P5 1343 aa26.08■■□□□ 1.77
LPCAT1-206ENST00000514484 SHANK3Q9BYB0 1731 aa26.08■■□□□ 1.76
LPCAT1-206ENST00000514484 FLT4P35916 1363 aa26.07■■□□□ 1.76
LPCAT1-206ENST00000514484 PTF1AQ7RTS3 328 aa26.07■■□□□ 1.76
LPCAT1-206ENST00000514484 SMG6Q86US8 1419 aaKnown RBP26.06■■□□□ 1.76
LPCAT1-206ENST00000514484 HSP90AB2PQ58FF8 381 aa26.06■■□□□ 1.76
LPCAT1-206ENST00000514484 CAMKK2Q96RR4 588 aa26.06■■□□□ 1.76
LPCAT1-206ENST00000514484 USHBP1Q8N6Y0 703 aa26.05■■□□□ 1.76
LPCAT1-206ENST00000514484 SRCAPQ6ZRS2 3230 aa26.05■■□□□ 1.76
LPCAT1-206ENST00000514484 INSRP06213 1382 aa26.05■■□□□ 1.76
LPCAT1-206ENST00000514484 MEGF6O75095 1541 aa26.04■■□□□ 1.76
LPCAT1-206ENST00000514484 NHSQ6T4R5 1651 aa26.04■■□□□ 1.76
LPCAT1-206ENST00000514484 PPM1GO15355 546 aaPredicted RBP26.04■■□□□ 1.76
LPCAT1-206ENST00000514484 TNNT2P45379 298 aaPredicted RBP26.04■■□□□ 1.76
LPCAT1-206ENST00000514484 RGPD3A6NKT7 1758 aaPredicted RBP26.04■■□□□ 1.76
LPCAT1-206ENST00000514484 RGPD4Q7Z3J3 1758 aa26.04■■□□□ 1.76
LPCAT1-206ENST00000514484 BCL9O00512 1426 aa26.04■■□□□ 1.76
LPCAT1-206ENST00000514484 PSDA5PKW4 1024 aaPredicted RBP26.02■■□□□ 1.76
LPCAT1-206ENST00000514484 NBPF6Q5VWK0 638 aa26.02■■□□□ 1.76
LPCAT1-206ENST00000514484 NBPF4Q96M43 638 aa26.02■■□□□ 1.76
LPCAT1-206ENST00000514484 KIF24Q5T7B8 1368 aa26.02■■□□□ 1.76
LPCAT1-206ENST00000514484 PARD3Q8TEW0 1356 aa26■■□□□ 1.75
LPCAT1-206ENST00000514484 ACSBG1Q96GR2 724 aa25.99■■□□□ 1.75
LPCAT1-206ENST00000514484 BCL11BQ9C0K0 894 aaPredicted RBP25.99■■□□□ 1.75
LPCAT1-206ENST00000514484 BTAF1O14981 1849 aa25.99■■□□□ 1.75
LPCAT1-206ENST00000514484 DOT1LQ8TEK3 1739 aa25.98■■□□□ 1.75
LPCAT1-206ENST00000514484 POLKQ9UBT6 870 aa25.97■■□□□ 1.75
LPCAT1-206ENST00000514484 NSD2O96028 1365 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms