RNA–Protein interactions for RNA: ENST00000514404.1

AC008560.1-202, humanhuman

APPRIS ALT2 TSL 4

Gene AC008560.1, Length 332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008560.1-202ENST00000514404 TRMT44Q8IYL2 757 aaKnown RBP4.28□□□□□ -1.72
AC008560.1-202ENST00000514404 IRF7Q92985 503 aa4.28□□□□□ -1.72
AC008560.1-202ENST00000514404 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
AC008560.1-202ENST00000514404 NXF1Q9UBU9 619 aaKnown RBP4.28□□□□□ -1.72
AC008560.1-202ENST00000514404 CBLBQ13191 982 aa4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 NR5A1Q13285 461 aa4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 C6orf118Q5T5N4 469 aa4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 PDXDC2PQ6P474 469 aa4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 ARMC2Q8NEN0 867 aa4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 ADAM32Q8TC27 787 aa4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 GJD4Q96KN9 370 aaPredicted RBP4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 ARHGAP9Q9BRR9 750 aa4.27□□□□□ -1.73
AC008560.1-202ENST00000514404 GPR37L1O60883 481 aa4.26□□□□□ -1.73
AC008560.1-202ENST00000514404 PPP1R26Q5T8A7 1209 aaPredicted RBP4.26□□□□□ -1.73
AC008560.1-202ENST00000514404 PCMTD1Q96MG8 357 aaPredicted RBP4.26□□□□□ -1.73
AC008560.1-202ENST00000514404 GOPCQ9HD26 462 aa4.26□□□□□ -1.73
AC008560.1-202ENST00000514404 MAP4K5Q9Y4K4 846 aa4.26□□□□□ -1.73
AC008560.1-202ENST00000514404 ERBB4Q15303 1308 aa4.25□□□□□ -1.73
AC008560.1-202ENST00000514404 SUZ12Q15022 739 aaKnown RBP4.25□□□□□ -1.73
AC008560.1-202ENST00000514404 MEIOBQ8N635 442 aa4.25□□□□□ -1.73
AC008560.1-202ENST00000514404 GPKOWQ92917 476 aaPredicted RBP eCLIP4.25□□□□□ -1.73
AC008560.1-202ENST00000514404 KCTD15Q96SI1 283 aaPredicted RBP4.25□□□□□ -1.73
AC008560.1-202ENST00000514404 SNRKQ9NRH2 765 aa4.25□□□□□ -1.73
AC008560.1-202ENST00000514404 TMPRSS4Q9NRS4 437 aa4.25□□□□□ -1.73
AC008560.1-202ENST00000514404 RAB15P59190 212 aa4.24□□□□□ -1.73
AC008560.1-202ENST00000514404 INTS6LQ5JSJ4 861 aaKnown RBP4.24□□□□□ -1.73
AC008560.1-202ENST00000514404 ZBTB33Q86T24 672 aa4.24□□□□□ -1.73
AC008560.1-202ENST00000514404 CCDC116Q8IYX3 515 aa4.24□□□□□ -1.73
AC008560.1-202ENST00000514404 LINC00528Q8N1L1 170 aa4.24□□□□□ -1.73
AC008560.1-202ENST00000514404 AGBL1Q96MI9 1066 aa4.24□□□□□ -1.73
AC008560.1-202ENST00000514404 DNMT3LQ9UJW3 386 aa4.24□□□□□ -1.73
AC008560.1-202ENST00000514404 BMP2P12643 396 aa4.23□□□□□ -1.73
AC008560.1-202ENST00000514404 ADD1P35611 737 aaKnown RBP4.23□□□□□ -1.73
AC008560.1-202ENST00000514404 PTK2Q05397 1052 aa4.23□□□□□ -1.73
AC008560.1-202ENST00000514404 NPAS3Q8IXF0 933 aa4.23□□□□□ -1.73
AC008560.1-202ENST00000514404 KDF1Q8NAX2 398 aaPredicted RBP4.23□□□□□ -1.73
AC008560.1-202ENST00000514404 MTMR14Q8NCE2 650 aa4.23□□□□□ -1.73
AC008560.1-202ENST00000514404 H3BM21 787 aa4.22□□□□□ -1.73
AC008560.1-202ENST00000514404 FBXO45P0C2W1 286 aa4.22□□□□□ -1.73
AC008560.1-202ENST00000514404 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
AC008560.1-202ENST00000514404 TMEM259Q4ZIN3 620 aa4.22□□□□□ -1.73
AC008560.1-202ENST00000514404 Q6ZVU0 165 aa4.22□□□□□ -1.73
AC008560.1-202ENST00000514404 SLC10A4Q96EP9 437 aa4.22□□□□□ -1.73
AC008560.1-202ENST00000514404 EMILIN1Q9Y6C2 1016 aa4.22□□□□□ -1.73
AC008560.1-202ENST00000514404 SOS2Q07890 1332 aaPredicted RBP4.21□□□□□ -1.73
AC008560.1-202ENST00000514404 ZC3H4Q9UPT8 1303 aaKnown RBP4.21□□□□□ -1.73
AC008560.1-202ENST00000514404 FIGNL2A6NMB9 653 aa4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 ERVH48-1M5A8F1 160 aa4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 LILRA1O75019 489 aa4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 GIGYF1O75420 1035 aaPredicted RBP4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 SCARF1Q14162 830 aa4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 KCTD17Q8N5Z5 321 aa4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 ZNF784Q8NCA9 323 aaPredicted RBP4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 ZNF395Q9H8N7 513 aaPredicted RBP4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 GPSM3Q9Y4H4 160 aa4.21□□□□□ -1.74
AC008560.1-202ENST00000514404 ESPNB1AK53 854 aa4.2□□□□□ -1.74
AC008560.1-202ENST00000514404 CTSOP43234 321 aaPredicted RBP4.2□□□□□ -1.74
AC008560.1-202ENST00000514404 RELBQ01201 579 aa4.2□□□□□ -1.74
AC008560.1-202ENST00000514404 DZIP3Q86Y13 1208 aaKnown RBP4.2□□□□□ -1.74
AC008560.1-202ENST00000514404 ZBBXA8MT70 800 aa4.19□□□□□ -1.74
AC008560.1-202ENST00000514404 SPINT1O43278 529 aa4.19□□□□□ -1.74
AC008560.1-202ENST00000514404 MAN1A2O60476 641 aa4.19□□□□□ -1.74
AC008560.1-202ENST00000514404 INSM2Q96T92 566 aaPredicted RBP4.19□□□□□ -1.74
AC008560.1-202ENST00000514404 TSEN34Q9BSV6 310 aaKnown RBP4.19□□□□□ -1.74
AC008560.1-202ENST00000514404 TTLL8A6PVC2 850 aa4.18□□□□□ -1.74
AC008560.1-202ENST00000514404 PPFIA3O75145 1194 aa4.18□□□□□ -1.74
AC008560.1-202ENST00000514404 GPR161Q8N6U8 529 aaKnown RBP4.18□□□□□ -1.74
AC008560.1-202ENST00000514404 CYLDQ9NQC7 956 aa4.18□□□□□ -1.74
AC008560.1-202ENST00000514404 PGPEP1Q9NXJ5 209 aa4.18□□□□□ -1.74
AC008560.1-202ENST00000514404 TBC1D2BQ9UPU7 963 aa4.18□□□□□ -1.74
AC008560.1-202ENST00000514404 PCDHB9Q9Y5E1 797 aa4.18□□□□□ -1.74
AC008560.1-202ENST00000514404 UPP2O95045 317 aa4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 SCTRP47872 440 aa4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 PTSQ03393 145 aa4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 DHX9Q08211 1270 aaKnown RBP4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 NBPF20Q3BBV1 942 aa4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 TSGA10IPQ3SY00 556 aa4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 FOXD4L5Q5VV16 416 aaPredicted RBP4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 BANK1Q8NDB2 785 aa4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 CDV3Q9UKY7 258 aaKnown RBP4.17□□□□□ -1.74
AC008560.1-202ENST00000514404 GDF11O95390 407 aa4.16□□□□□ -1.74
AC008560.1-202ENST00000514404 KRT76Q01546 638 aa4.16□□□□□ -1.74
AC008560.1-202ENST00000514404 KCNMA1Q12791 1236 aa4.16□□□□□ -1.74
AC008560.1-202ENST00000514404 NR1H3Q13133 447 aa4.16□□□□□ -1.74
AC008560.1-202ENST00000514404 IRF5Q13568 498 aa4.16□□□□□ -1.74
AC008560.1-202ENST00000514404 TMEM151AQ8N4L1 468 aa4.16□□□□□ -1.74
AC008560.1-202ENST00000514404 RNF217Q8TC41 542 aa4.16□□□□□ -1.74
AC008560.1-202ENST00000514404 SENP3-EIF4A1A0A087X0R7 540 aa4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 ADH1AP07327 375 aa4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 VSIG8P0DPA2 414 aa4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 PTGIRP43119 386 aa4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 CCDC155Q8N6L0 562 aa4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 CDCA7Q9BWT1 371 aaPredicted RBP4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 POLMQ9NP87 494 aaPredicted RBP4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 NDUFB9Q9Y6M9 179 aa4.15□□□□□ -1.75
AC008560.1-202ENST00000514404 SLC35F4A4IF30 521 aa4.14□□□□□ -1.75
AC008560.1-202ENST00000514404 STAU1O95793 577 aaKnown RBP4.14□□□□□ -1.75
AC008560.1-202ENST00000514404 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.14□□□□□ -1.75
AC008560.1-202ENST00000514404 RNFT1Q5M7Z0 435 aa4.14□□□□□ -1.75
AC008560.1-202ENST00000514404 PNMA1Q8ND90 353 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms