RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 KCNQ2O43526 872 aa12.98□□□□□ -0.33
SNHG4-207ENST00000513259 SPON1Q9HCB6 807 aa12.98□□□□□ -0.33
SNHG4-207ENST00000513259 PPP1R1BQ9UD71 204 aaPredicted RBP12.98□□□□□ -0.33
SNHG4-207ENST00000513259 CPDO75976 1380 aa12.97□□□□□ -0.33
SNHG4-207ENST00000513259 GCP02774 474 aa12.97□□□□□ -0.33
SNHG4-207ENST00000513259 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
SNHG4-207ENST00000513259 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
SNHG4-207ENST00000513259 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.33
SNHG4-207ENST00000513259 USP19O94966 1318 aa12.96□□□□□ -0.33
SNHG4-207ENST00000513259 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
SNHG4-207ENST00000513259 ZBTB7CA1YPR0 619 aa12.95□□□□□ -0.34
SNHG4-207ENST00000513259 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
SNHG4-207ENST00000513259 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
SNHG4-207ENST00000513259 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
SNHG4-207ENST00000513259 PTF1AQ7RTS3 328 aa12.94□□□□□ -0.34
SNHG4-207ENST00000513259 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
SNHG4-207ENST00000513259 CRB1P82279 1406 aa12.93□□□□□ -0.34
SNHG4-207ENST00000513259 OVOS2A0A0G2JMS6 1433 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
SNHG4-207ENST00000513259 PLSCR1O15162 318 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
SNHG4-207ENST00000513259 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 PPIP5K1Q6PFW1 1433 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 PDGFDQ9GZP0 370 aaPredicted RBP12.92□□□□□ -0.34
SNHG4-207ENST00000513259 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
SNHG4-207ENST00000513259 DDB1Q16531 1140 aa12.91□□□□□ -0.34
SNHG4-207ENST00000513259 PROM2Q8N271 834 aa12.91□□□□□ -0.34
SNHG4-207ENST00000513259 RGPD3A6NKT7 1758 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-207ENST00000513259 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
SNHG4-207ENST00000513259 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
SNHG4-207ENST00000513259 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
SNHG4-207ENST00000513259 CASZ1Q86V15 1759 aa12.9□□□□□ -0.34
SNHG4-207ENST00000513259 NLRP6P59044 892 aa12.9□□□□□ -0.34
SNHG4-207ENST00000513259 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
SNHG4-207ENST00000513259 ZBTB7AO95365 584 aa12.89□□□□□ -0.35
SNHG4-207ENST00000513259 TOM1L2Q6ZVM7 507 aa12.89□□□□□ -0.35
SNHG4-207ENST00000513259 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
SNHG4-207ENST00000513259 CABP1Q9NZU7 370 aa12.89□□□□□ -0.35
SNHG4-207ENST00000513259 AXIN2Q9Y2T1 843 aa12.89□□□□□ -0.35
SNHG4-207ENST00000513259 AATKQ6ZMQ8 1374 aa12.89□□□□□ -0.35
SNHG4-207ENST00000513259 COL18A1P39060 1754 aa12.89□□□□□ -0.35
SNHG4-207ENST00000513259 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
SNHG4-207ENST00000513259 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
SNHG4-207ENST00000513259 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
SNHG4-207ENST00000513259 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-207ENST00000513259 UTRNP46939 3433 aa12.87□□□□□ -0.35
SNHG4-207ENST00000513259 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
SNHG4-207ENST00000513259 SLIT3O75094 1523 aa12.87□□□□□ -0.35
SNHG4-207ENST00000513259 USP6P35125 1406 aa12.87□□□□□ -0.35
SNHG4-207ENST00000513259 AKAP12Q02952 1782 aa12.86□□□□□ -0.35
SNHG4-207ENST00000513259 MYOM1P52179 1685 aa12.86□□□□□ -0.35
SNHG4-207ENST00000513259 PTGER2P43116 358 aa12.86□□□□□ -0.35
SNHG4-207ENST00000513259 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
SNHG4-207ENST00000513259 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
SNHG4-207ENST00000513259 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
SNHG4-207ENST00000513259 PIK3C2AO00443 1686 aa12.85□□□□□ -0.35
SNHG4-207ENST00000513259 QRICH2Q9H0J4 1663 aa12.85□□□□□ -0.35
SNHG4-207ENST00000513259 SOX12O15370 315 aa12.83□□□□□ -0.36
SNHG4-207ENST00000513259 SLC15A2Q16348 729 aa12.83□□□□□ -0.36
SNHG4-207ENST00000513259 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
SNHG4-207ENST00000513259 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
SNHG4-207ENST00000513259 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
SNHG4-207ENST00000513259 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.36
SNHG4-207ENST00000513259 STK32BQ9NY57 414 aa12.83□□□□□ -0.36
SNHG4-207ENST00000513259 BCL9O00512 1426 aa12.82□□□□□ -0.36
SNHG4-207ENST00000513259 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
SNHG4-207ENST00000513259 EXOC5O00471 708 aa12.82□□□□□ -0.36
SNHG4-207ENST00000513259 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
SNHG4-207ENST00000513259 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
SNHG4-207ENST00000513259 FHDC1Q9C0D6 1143 aaPredicted RBP12.82□□□□□ -0.36
SNHG4-207ENST00000513259 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
SNHG4-207ENST00000513259 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
SNHG4-207ENST00000513259 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
SNHG4-207ENST00000513259 MTFR1LQ9H019 292 aa12.79□□□□□ -0.36
SNHG4-207ENST00000513259 CHD4Q14839 1912 aa12.79□□□□□ -0.36
SNHG4-207ENST00000513259 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
SNHG4-207ENST00000513259 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
SNHG4-207ENST00000513259 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
SNHG4-207ENST00000513259 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
SNHG4-207ENST00000513259 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
SNHG4-207ENST00000513259 NFAT5O94916 1531 aa12.77□□□□□ -0.37
SNHG4-207ENST00000513259 TRPM1Q7Z4N2 1603 aa12.77□□□□□ -0.37
SNHG4-207ENST00000513259 NHSQ6T4R5 1651 aa12.77□□□□□ -0.37
SNHG4-207ENST00000513259 ARXQ96QS3 562 aa12.76□□□□□ -0.37
SNHG4-207ENST00000513259 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
SNHG4-207ENST00000513259 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
SNHG4-207ENST00000513259 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
SNHG4-207ENST00000513259 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
SNHG4-207ENST00000513259 BTAF1O14981 1849 aa12.74□□□□□ -0.37
SNHG4-207ENST00000513259 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
SNHG4-207ENST00000513259 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
SNHG4-207ENST00000513259 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
SNHG4-207ENST00000513259 NLRP2Q9NX02 1062 aa12.74□□□□□ -0.37
SNHG4-207ENST00000513259 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
SNHG4-207ENST00000513259 C1QTNF8P60827 252 aa12.73□□□□□ -0.37
SNHG4-207ENST00000513259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
SNHG4-207ENST00000513259 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms