RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12	□□□□□ -0.49
ACSF2-223	ENST00000513101	ZBTB7C	A1YPR0	619 aa		12	□□□□□ -0.49
ACSF2-223	ENST00000513101	USP54	Q70EL1	1684 aa		12	□□□□□ -0.49
ACSF2-223	ENST00000513101	LARP1	Q6PKG0	1096 aa	Known RBP	11.99	□□□□□ -0.49
ACSF2-223	ENST00000513101	SPATA31A1	Q5TZJ5	1347 aa		11.99	□□□□□ -0.49
ACSF2-223	ENST00000513101	RGS12	O14924	1447 aa		11.99	□□□□□ -0.49
ACSF2-223	ENST00000513101	PLCH1	Q4KWH8	1693 aa		11.98	□□□□□ -0.49
ACSF2-223	ENST00000513101	BARGIN	Q6ZT62	677 aa		11.98	□□□□□ -0.49
ACSF2-223	ENST00000513101	SEPT12	Q8IYM1	358 aa		11.98	□□□□□ -0.49
ACSF2-223	ENST00000513101	MIER1	Q8N108	512 aa		11.98	□□□□□ -0.49
ACSF2-223	ENST00000513101	IP6K1	Q92551	441 aa		11.98	□□□□□ -0.49
ACSF2-223	ENST00000513101	THRAP3	Q9Y2W1	955 aa	Known RBP	11.98	□□□□□ -0.49
ACSF2-223	ENST00000513101	KNSTRN	Q9Y448	316 aa		11.98	□□□□□ -0.49
ACSF2-223	ENST00000513101	LMO7	Q8WWI1	1683 aa		11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	ABCC6	O95255	1503 aa		11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	COL5A2	P05997	1499 aa	Predicted RBP	11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	MAP3K19	Q56UN5	1328 aa		11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	WDR17	Q8IZU2	1322 aa		11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	PER1	O15534	1290 aa	Predicted RBP	11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	FAM98C	Q17RN3	349 aa	Known RBP	11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	TCP11L2	Q8N4U5	519 aa		11.97	□□□□□ -0.49
ACSF2-223	ENST00000513101	GLI3	P10071	1580 aa		11.96	□□□□□ -0.49
ACSF2-223	ENST00000513101	CRB1	P82279	1406 aa		11.96	□□□□□ -0.49
ACSF2-223	ENST00000513101	NSD2	O96028	1365 aa		11.96	□□□□□ -0.49
ACSF2-223	ENST00000513101	FBLN1	P23142	703 aa		11.96	□□□□□ -0.49
ACSF2-223	ENST00000513101	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
ACSF2-223	ENST00000513101	CARD10	Q9BWT7	1032 aa		11.96	□□□□□ -0.49
ACSF2-223	ENST00000513101	NRAP	Q86VF7	1730 aa		11.96	□□□□□ -0.49
ACSF2-223	ENST00000513101	KIF24	Q5T7B8	1368 aa		11.95	□□□□□ -0.5
ACSF2-223	ENST00000513101	ERBB3	P21860	1342 aa		11.95	□□□□□ -0.5
ACSF2-223	ENST00000513101	AMPH	P49418	695 aa		11.95	□□□□□ -0.5
ACSF2-223	ENST00000513101	TOM1L2	Q6ZVM7	507 aa		11.95	□□□□□ -0.5
ACSF2-223	ENST00000513101	BLM	P54132	1417 aa	Predicted RBP	11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	RTL1	A6NKG5	1358 aa		11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	CCER2	I3L3R5	266 aa		11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	CSB-PGBD3	P0DP91	1061 aa		11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	HOXC9	P31274	260 aa		11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	RRS1	Q15050	365 aa	Known RBP	11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	ANKRD24	Q8TF21	1146 aa		11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	USP35	Q9P2H5	1018 aa		11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	COL18A1	P39060	1754 aa		11.94	□□□□□ -0.5
ACSF2-223	ENST00000513101	KRT27	Q7Z3Y8	459 aa		11.93	□□□□□ -0.5
ACSF2-223	ENST00000513101	NPC1L1	Q9UHC9	1359 aa		11.92	□□□□□ -0.5
ACSF2-223	ENST00000513101		A0A0G2JS52	829 aa		11.92	□□□□□ -0.5
ACSF2-223	ENST00000513101	MYT1	Q01538	1121 aa		11.92	□□□□□ -0.5
ACSF2-223	ENST00000513101	MORC1	Q86VD1	984 aa		11.92	□□□□□ -0.5
ACSF2-223	ENST00000513101	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.92	□□□□□ -0.5
ACSF2-223	ENST00000513101	POLK	Q9UBT6	870 aa		11.92	□□□□□ -0.5
ACSF2-223	ENST00000513101	ANP32C	O43423	234 aa		11.91	□□□□□ -0.5
ACSF2-223	ENST00000513101	NLRP2	Q9NX02	1062 aa		11.91	□□□□□ -0.5
ACSF2-223	ENST00000513101	EMILIN1	Q9Y6C2	1016 aa		11.91	□□□□□ -0.5
ACSF2-223	ENST00000513101	INSR	P06213	1382 aa		11.91	□□□□□ -0.5
ACSF2-223	ENST00000513101	FLT4	P35916	1363 aa		11.91	□□□□□ -0.5
ACSF2-223	ENST00000513101	HSP90AB2P	Q58FF8	381 aa		11.9	□□□□□ -0.5
ACSF2-223	ENST00000513101	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.9	□□□□□ -0.5
ACSF2-223	ENST00000513101	CCDC125	Q86Z20	511 aa		11.89	□□□□□ -0.51
ACSF2-223	ENST00000513101	LTV1	Q96GA3	475 aa	Predicted RBP	11.89	□□□□□ -0.51
ACSF2-223	ENST00000513101	TNNT2	P45379	298 aa	Predicted RBP	11.88	□□□□□ -0.51
ACSF2-223	ENST00000513101	PDE3B	Q13370	1112 aa		11.88	□□□□□ -0.51
ACSF2-223	ENST00000513101	DISP2	A7MBM2	1401 aa		11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	EXOC5	O00471	708 aa		11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	PPM1G	O15355	546 aa	Predicted RBP	11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	IL2RB	P14784	551 aa		11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	DDB1	Q16531	1140 aa		11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	KIF20B	Q96Q89	1820 aa		11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	PARD3	Q8TEW0	1356 aa		11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	THSD7A	Q9UPZ6	1657 aa		11.87	□□□□□ -0.51
ACSF2-223	ENST00000513101	SMG6	Q86US8	1419 aa	Known RBP	11.86	□□□□□ -0.51
ACSF2-223	ENST00000513101	NBPF6	Q5VWK0	638 aa		11.86	□□□□□ -0.51
ACSF2-223	ENST00000513101	FAM196A	Q6ZSG2	479 aa		11.86	□□□□□ -0.51
ACSF2-223	ENST00000513101	NBPF4	Q96M43	638 aa		11.86	□□□□□ -0.51
ACSF2-223	ENST00000513101	CC2D1B	Q5T0F9	858 aa	Known RBP	11.85	□□□□□ -0.51
ACSF2-223	ENST00000513101	LTN1	O94822	1766 aa		11.84	□□□□□ -0.51
ACSF2-223	ENST00000513101	RALBP1	Q15311	655 aa		11.84	□□□□□ -0.51
ACSF2-223	ENST00000513101	EIF4A2	Q14240	407 aa	Known RBP	11.83	□□□□□ -0.52
ACSF2-223	ENST00000513101	FAM182B	Q5T319	152 aa		11.83	□□□□□ -0.52
ACSF2-223	ENST00000513101	RGPD5	Q99666	1765 aa		11.82	□□□□□ -0.52
ACSF2-223	ENST00000513101	MTHFS	P49914	203 aa		11.82	□□□□□ -0.52
ACSF2-223	ENST00000513101	MARCH10	Q8NA82	808 aa	Predicted RBP	11.82	□□□□□ -0.52
ACSF2-223	ENST00000513101	EYA1	Q99502	592 aa		11.82	□□□□□ -0.52
ACSF2-223	ENST00000513101	PEAK1	Q9H792	1746 aa		11.81	□□□□□ -0.52
ACSF2-223	ENST00000513101	ANKRD26	Q9UPS8	1709 aa		11.81	□□□□□ -0.52
ACSF2-223	ENST00000513101	BCL9	O00512	1426 aa		11.81	□□□□□ -0.52
ACSF2-223	ENST00000513101	SF3B2	Q13435	895 aa	Known RBP	11.81	□□□□□ -0.52
ACSF2-223	ENST00000513101	RAPGEF4	Q8WZA2	1011 aa		11.81	□□□□□ -0.52
ACSF2-223	ENST00000513101	PARP4	Q9UKK3	1724 aa	Known RBP	11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	OVOS2	A0A0G2JMS6	1433 aa		11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	NCAPD2	Q15021	1401 aa		11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	TNS2	Q63HR2	1409 aa		11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	TAT	P17735	454 aa	Predicted RBP	11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	USHBP1	Q8N6Y0	703 aa		11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	ZCRB1	Q8TBF4	217 aa	Known RBP	11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	IGSF1	Q8N6C5	1336 aa		11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	SRCAP	Q6ZRS2	3230 aa		11.8	□□□□□ -0.52
ACSF2-223	ENST00000513101	BRWD3	Q6RI45	1802 aa		11.79	□□□□□ -0.52
ACSF2-223	ENST00000513101	FAM208A	Q9UK61	1670 aa	Known RBP	11.79	□□□□□ -0.52
ACSF2-223	ENST00000513101	IL13	P35225	146 aa		11.79	□□□□□ -0.52
ACSF2-223	ENST00000513101	EP400	Q96L91	3159 aa		11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms