RNA–Protein interactions for RNA: ENST00000512701.6

TTC39B-208, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TTC39B, Length 10,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-208ENST00000512701 ATP2C2O75185 946 aa9.1□□□□□ -0.95
TTC39B-208ENST00000512701 LETM1O95202 739 aaPredicted RBP9.1□□□□□ -0.95
TTC39B-208ENST00000512701 RAB11FIP4Q86YS3 637 aa9.1□□□□□ -0.95
TTC39B-208ENST00000512701 TNPO1Q92973 898 aaKnown RBP9.1□□□□□ -0.95
TTC39B-208ENST00000512701 CCDC83Q8IWF9 413 aa9.1□□□□□ -0.95
TTC39B-208ENST00000512701 SLC4A2P04920 1241 aa9.1□□□□□ -0.95
TTC39B-208ENST00000512701 CHD1LQ86WJ1 897 aa9.1□□□□□ -0.95
TTC39B-208ENST00000512701 TWISTNBQ3B726 338 aaPredicted RBP9.09□□□□□ -0.95
TTC39B-208ENST00000512701 DEF6Q9H4E7 631 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 PDRG1Q9NUG6 133 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 ROCK1Q13464 1354 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 CASTP20810 708 aaKnown RBP9.09□□□□□ -0.95
TTC39B-208ENST00000512701 PSMA5P28066 241 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 ATP2B2Q01814 1243 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 IKQ13123 557 aaPredicted RBP9.09□□□□□ -0.95
TTC39B-208ENST00000512701 RNF187Q5TA31 235 aaPredicted RBP9.09□□□□□ -0.95
TTC39B-208ENST00000512701 ISM2Q6H9L7 571 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 CPLX3Q8WVH0 158 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 NUP62CLQ9H1M0 184 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 RNF216Q9NWF9 866 aaPredicted RBP9.09□□□□□ -0.95
TTC39B-208ENST00000512701 KRT18P05783 430 aaKnown RBP9.09□□□□□ -0.95
TTC39B-208ENST00000512701 CYP46A1Q9Y6A2 500 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 UBE2Q2Q8WVN8 375 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 LRRCC1Q9C099 1032 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 WDR97A6NE52 1622 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 FAM107BQ9H098 131 aa9.09□□□□□ -0.95
TTC39B-208ENST00000512701 AMOTL1Q8IY63 956 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 SMARCE1Q969G3 411 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 CCDC113Q9H0I3 377 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 BAZ1AQ9NRL2 1556 aaPredicted RBP9.08□□□□□ -0.96
TTC39B-208ENST00000512701 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 BRD4O60885 1362 aaPredicted RBP9.08□□□□□ -0.96
TTC39B-208ENST00000512701 ZNF396Q96N95 335 aaPredicted RBP9.08□□□□□ -0.96
TTC39B-208ENST00000512701 BIN1O00499 593 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 KLHL10Q6JEL2 608 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 GOLGA6L10A6NI86 522 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 SSBP05455 408 aaKnown RBP eCLIP9.08□□□□□ -0.96
TTC39B-208ENST00000512701 CDK5RAP3Q96JB5 506 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 RAI14Q9P0K7 980 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 FILIP1LQ4L180 1135 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 TMEM57Q8N5G2 664 aa9.08□□□□□ -0.96
TTC39B-208ENST00000512701 AACSQ86V21 672 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 NLRP2Q9NX02 1062 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 EID1Q9Y6B2 187 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 GIMAP7Q8NHV1 300 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 PPARDQ03181 441 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 DHX8Q14562 1220 aaKnown RBP9.07□□□□□ -0.96
TTC39B-208ENST00000512701 TTC39AQ5SRH9 613 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 MYL6BP14649 208 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 BCCIPQ9P287 314 aaKnown RBP eCLIP9.07□□□□□ -0.96
TTC39B-208ENST00000512701 EXOC6BQ9Y2D4 811 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 URI1O94763 535 aaPredicted RBP9.07□□□□□ -0.96
TTC39B-208ENST00000512701 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
TTC39B-208ENST00000512701 WDR33Q9C0J8 1336 aaKnown RBP9.07□□□□□ -0.96
TTC39B-208ENST00000512701 TMEM132AQ24JP5 1023 aa9.06□□□□□ -0.96
TTC39B-208ENST00000512701 PRPF40BQ6NWY9 871 aaKnown RBP9.06□□□□□ -0.96
TTC39B-208ENST00000512701 HSP90AA4PQ58FG1 418 aa9.06□□□□□ -0.96
TTC39B-208ENST00000512701 CLIP2Q9UDT6 1046 aa9.06□□□□□ -0.96
TTC39B-208ENST00000512701 SMG6Q86US8 1419 aaKnown RBP9.06□□□□□ -0.96
TTC39B-208ENST00000512701 DDX58O95786 925 aaKnown RBP9.06□□□□□ -0.96
TTC39B-208ENST00000512701 MVPQ14764 893 aaKnown RBP9.06□□□□□ -0.96
TTC39B-208ENST00000512701 CFAP100Q494V2 611 aa9.06□□□□□ -0.96
TTC39B-208ENST00000512701 BBXQ8WY36 941 aaPredicted RBP9.06□□□□□ -0.96
TTC39B-208ENST00000512701 UBXN4Q92575 508 aa9.06□□□□□ -0.96
TTC39B-208ENST00000512701 KRT85P78386 507 aa9.06□□□□□ -0.96
TTC39B-208ENST00000512701 CFAP70Q5T0N1 1121 aa9.06□□□□□ -0.96
TTC39B-208ENST00000512701 SERPINA10Q9UK55 444 aa9.05□□□□□ -0.96
TTC39B-208ENST00000512701 KIAA1328Q86T90 577 aa9.05□□□□□ -0.96
TTC39B-208ENST00000512701 PNISRQ8TF01 805 aaKnown RBP9.05□□□□□ -0.96
TTC39B-208ENST00000512701 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
TTC39B-208ENST00000512701 TMCO3Q6UWJ1 677 aa9.05□□□□□ -0.96
TTC39B-208ENST00000512701 CLASRPQ8N2M8 674 aaKnown RBP9.05□□□□□ -0.96
TTC39B-208ENST00000512701 CCP110O43303 1012 aa9.05□□□□□ -0.96
TTC39B-208ENST00000512701 LMAN1P49257 510 aa9.05□□□□□ -0.96
TTC39B-208ENST00000512701 GNAI2P04899 355 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 SSR1P43307 286 aaKnown RBP9.04□□□□□ -0.96
TTC39B-208ENST00000512701 PSME1Q06323 249 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 PTPN14Q15678 1187 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 ERLIN1O75477 346 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 RRS1Q15050 365 aaKnown RBP9.04□□□□□ -0.96
TTC39B-208ENST00000512701 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 SLC12A5Q9H2X9 1139 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 VGLL3A8MV65 326 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 MAP3K11Q16584 847 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 LRRFIP1Q32MZ4 808 aaKnown RBP9.04□□□□□ -0.96
TTC39B-208ENST00000512701 RBM33Q96EV2 1170 aaKnown RBP9.04□□□□□ -0.96
TTC39B-208ENST00000512701 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 ADCY5O95622 1261 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 CASQ1P31415 396 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 MATR3P43243 847 aaKnown RBP eCLIP9.04□□□□□ -0.96
TTC39B-208ENST00000512701 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 ZNHIT6Q9NWK9 470 aaKnown RBP9.04□□□□□ -0.96
TTC39B-208ENST00000512701 CEP57L1Q8IYX8 460 aa9.04□□□□□ -0.96
TTC39B-208ENST00000512701 TERF1P54274 439 aa9.03□□□□□ -0.96
TTC39B-208ENST00000512701 SEPT7Q16181 437 aaKnown RBP9.03□□□□□ -0.96
TTC39B-208ENST00000512701 TFIP11Q9UBB9 837 aaKnown RBP9.03□□□□□ -0.96
TTC39B-208ENST00000512701 EIF3JO75822 258 aaKnown RBP9.03□□□□□ -0.96
TTC39B-208ENST00000512701 RBM42Q9BTD8 480 aaKnown RBP9.03□□□□□ -0.96
TTC39B-208ENST00000512701 GOLGA6L10A0A0M3HER8 536 aa9.03□□□□□ -0.96
TTC39B-208ENST00000512701 ARHGAP29Q52LW3 1261 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms