RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
SUB1-209ENST00000511615 MST1RQ04912 1400 aa12.11□□□□□ -0.47
SUB1-209ENST00000511615 PNPLA6Q8IY17 1366 aa12.11□□□□□ -0.47
SUB1-209ENST00000511615 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
SUB1-209ENST00000511615 PLEKHF1Q96S99 279 aa12.1□□□□□ -0.47
SUB1-209ENST00000511615 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
SUB1-209ENST00000511615 ANKRD26Q9UPS8 1709 aa12.1□□□□□ -0.47
SUB1-209ENST00000511615 COL3A1P02461 1466 aaPredicted RBP12.1□□□□□ -0.47
SUB1-209ENST00000511615 AATKQ6ZMQ8 1374 aa12.1□□□□□ -0.47
SUB1-209ENST00000511615 FCHSD2O94868 740 aa12.1□□□□□ -0.47
SUB1-209ENST00000511615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
SUB1-209ENST00000511615 COG6Q9Y2V7 657 aa12.1□□□□□ -0.47
SUB1-209ENST00000511615 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
SUB1-209ENST00000511615 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
SUB1-209ENST00000511615 NME9Q86XW9 330 aa12.09□□□□□ -0.47
SUB1-209ENST00000511615 ITSN1Q15811 1721 aa12.09□□□□□ -0.47
SUB1-209ENST00000511615 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
SUB1-209ENST00000511615 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
SUB1-209ENST00000511615 PANK1Q8TE04 598 aa12.08□□□□□ -0.48
SUB1-209ENST00000511615 COG3Q96JB2 828 aa12.08□□□□□ -0.48
SUB1-209ENST00000511615 SLAIN2Q9P270 581 aa12.08□□□□□ -0.48
SUB1-209ENST00000511615 DCAF8L1A6NGE4 600 aa12.07□□□□□ -0.48
SUB1-209ENST00000511615 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
SUB1-209ENST00000511615 PSME1Q06323 249 aa12.07□□□□□ -0.48
SUB1-209ENST00000511615 RWDD1Q9H446 243 aaPredicted RBP12.07□□□□□ -0.48
SUB1-209ENST00000511615 FOXO3O43524 673 aa12.06□□□□□ -0.48
SUB1-209ENST00000511615 RIPK4P57078 832 aa12.06□□□□□ -0.48
SUB1-209ENST00000511615 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
SUB1-209ENST00000511615 OVOS2A0A0J9YW53 1432 aa12.06□□□□□ -0.48
SUB1-209ENST00000511615 OVOS2Q6IE36 1432 aa12.06□□□□□ -0.48
SUB1-209ENST00000511615 LTBP4Q8N2S1 1624 aa12.06□□□□□ -0.48
SUB1-209ENST00000511615 RGS3P49796 1198 aa12.06□□□□□ -0.48
SUB1-209ENST00000511615 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
SUB1-209ENST00000511615 POLKQ9UBT6 870 aa12.06□□□□□ -0.48
SUB1-209ENST00000511615 RGPD8O14715 1765 aaPredicted RBP12.05□□□□□ -0.48
SUB1-209ENST00000511615 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
SUB1-209ENST00000511615 IPO8O15397 1037 aaKnown RBP12.05□□□□□ -0.48
SUB1-209ENST00000511615 IGHDP01880 384 aa12.05□□□□□ -0.48
SUB1-209ENST00000511615 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
SUB1-209ENST00000511615 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
SUB1-209ENST00000511615 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
SUB1-209ENST00000511615 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
SUB1-209ENST00000511615 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
SUB1-209ENST00000511615 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
SUB1-209ENST00000511615 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
SUB1-209ENST00000511615 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
SUB1-209ENST00000511615 MVPQ14764 893 aaKnown RBP12.04□□□□□ -0.48
SUB1-209ENST00000511615 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
SUB1-209ENST00000511615 SMC4Q9NTJ3 1288 aa12.04□□□□□ -0.48
SUB1-209ENST00000511615 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
SUB1-209ENST00000511615 KIF20BQ96Q89 1820 aa12.04□□□□□ -0.48
SUB1-209ENST00000511615 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
SUB1-209ENST00000511615 BRINP3Q76B58 766 aa12.03□□□□□ -0.48
SUB1-209ENST00000511615 NPHP3Q7Z494 1330 aa12.03□□□□□ -0.48
SUB1-209ENST00000511615 SBNO1A3KN83 1393 aa12.03□□□□□ -0.48
SUB1-209ENST00000511615 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
SUB1-209ENST00000511615 SKAP1Q86WV1 359 aa12.03□□□□□ -0.48
SUB1-209ENST00000511615 ABTB2Q8N961 1025 aa12.03□□□□□ -0.48
SUB1-209ENST00000511615 KIF16BQ96L93 1317 aa12.02□□□□□ -0.49
SUB1-209ENST00000511615 NLRP6P59044 892 aa12.02□□□□□ -0.49
SUB1-209ENST00000511615 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
SUB1-209ENST00000511615 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.49
SUB1-209ENST00000511615 CHMP4BQ9H444 224 aaKnown RBP12.02□□□□□ -0.49
SUB1-209ENST00000511615 DDX19BQ9UMR2 479 aa12.02□□□□□ -0.49
SUB1-209ENST00000511615 KIF24Q5T7B8 1368 aa12.01□□□□□ -0.49
SUB1-209ENST00000511615 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
SUB1-209ENST00000511615 PRKAR2BP31323 418 aa12.01□□□□□ -0.49
SUB1-209ENST00000511615 NFE2L2Q16236 605 aa12.01□□□□□ -0.49
SUB1-209ENST00000511615 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
SUB1-209ENST00000511615 RSPH6AQ9H0K4 717 aa12.01□□□□□ -0.49
SUB1-209ENST00000511615 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
SUB1-209ENST00000511615 USP35Q9P2H5 1018 aa12□□□□□ -0.49
SUB1-209ENST00000511615 RLBP1P12271 317 aa12□□□□□ -0.49
SUB1-209ENST00000511615 FBLN1P23142 703 aa12□□□□□ -0.49
SUB1-209ENST00000511615 NBR1Q14596 966 aa12□□□□□ -0.49
SUB1-209ENST00000511615 ATF7IPQ6VMQ6 1270 aa12□□□□□ -0.49
SUB1-209ENST00000511615 CDK12Q9NYV4 1490 aaPredicted RBP12□□□□□ -0.49
SUB1-209ENST00000511615 IL13P35225 146 aa11.99□□□□□ -0.49
SUB1-209ENST00000511615 GNAI1P63096 354 aa11.99□□□□□ -0.49
SUB1-209ENST00000511615 KCNH5Q8NCM2 988 aa11.99□□□□□ -0.49
SUB1-209ENST00000511615 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
SUB1-209ENST00000511615 PCDHB15Q9Y5E8 787 aa11.99□□□□□ -0.49
SUB1-209ENST00000511615 USP54Q70EL1 1684 aa11.99□□□□□ -0.49
SUB1-209ENST00000511615 USP19O94966 1318 aa11.98□□□□□ -0.49
SUB1-209ENST00000511615 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
SUB1-209ENST00000511615 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
SUB1-209ENST00000511615 UPF2Q9HAU5 1272 aaKnown RBP11.97□□□□□ -0.49
SUB1-209ENST00000511615 IFT57Q9NWB7 429 aa11.97□□□□□ -0.49
SUB1-209ENST00000511615 NOB1Q9ULX3 412 aaKnown RBP11.97□□□□□ -0.49
SUB1-209ENST00000511615 PDZRN3Q9UPQ7 1066 aa11.97□□□□□ -0.49
SUB1-209ENST00000511615 EMILIN1Q9Y6C2 1016 aa11.97□□□□□ -0.49
SUB1-209ENST00000511615 PXDNQ92626 1479 aa11.97□□□□□ -0.49
SUB1-209ENST00000511615 TRIM27P14373 513 aa11.97□□□□□ -0.49
SUB1-209ENST00000511615 HDAC1Q13547 482 aaPredicted RBP11.97□□□□□ -0.49
SUB1-209ENST00000511615 ITPRIPQ8IWB1 547 aa11.97□□□□□ -0.49
SUB1-209ENST00000511615 TNNQ9UQP3 1299 aa11.97□□□□□ -0.49
SUB1-209ENST00000511615 PIK3C2AO00443 1686 aa11.96□□□□□ -0.49
SUB1-209ENST00000511615 MAP3K19Q56UN5 1328 aa11.96□□□□□ -0.49
SUB1-209ENST00000511615 GCP02774 474 aa11.96□□□□□ -0.5
SUB1-209ENST00000511615 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms