RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 ZRANB1Q9UGI0 708 aa23.82■■□□□ 1.4
CLDND1-221ENST00000510541 RTL1A6NKG5 1358 aa23.8■■□□□ 1.4
CLDND1-221ENST00000510541 CCDC7Q96M83 1385 aa23.8■■□□□ 1.4
CLDND1-221ENST00000510541 PLEKHG5O94827 1062 aa23.8■■□□□ 1.4
CLDND1-221ENST00000510541 CRB1P82279 1406 aa23.8■■□□□ 1.4
CLDND1-221ENST00000510541 PANK3Q9H999 370 aa23.8■■□□□ 1.4
CLDND1-221ENST00000510541 WDR17Q8IZU2 1322 aa23.8■■□□□ 1.4
CLDND1-221ENST00000510541 EVA1CP58658 441 aa23.78■■□□□ 1.4
CLDND1-221ENST00000510541 AXIN2Q9Y2T1 843 aa23.78■■□□□ 1.4
CLDND1-221ENST00000510541 THSD7AQ9UPZ6 1657 aa23.78■■□□□ 1.4
CLDND1-221ENST00000510541 LTN1O94822 1766 aa23.78■■□□□ 1.4
CLDND1-221ENST00000510541 IP6K1Q92551 441 aa23.77■■□□□ 1.4
CLDND1-221ENST00000510541 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
CLDND1-221ENST00000510541 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
CLDND1-221ENST00000510541 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
CLDND1-221ENST00000510541 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
CLDND1-221ENST00000510541 PER1O15534 1290 aaPredicted RBP23.75■■□□□ 1.39
CLDND1-221ENST00000510541 TCP11L2Q8N4U5 519 aa23.75■■□□□ 1.39
CLDND1-221ENST00000510541 ERBB3P21860 1342 aa23.75■■□□□ 1.39
CLDND1-221ENST00000510541 LARP1Q6PKG0 1096 aaKnown RBP23.74■■□□□ 1.39
CLDND1-221ENST00000510541 CDCA7Q9BWT1 371 aaPredicted RBP23.74■■□□□ 1.39
CLDND1-221ENST00000510541 CARD10Q9BWT7 1032 aa23.74■■□□□ 1.39
CLDND1-221ENST00000510541 MAP3K19Q56UN5 1328 aa23.73■■□□□ 1.39
CLDND1-221ENST00000510541 FAM208AQ9UK61 1670 aaKnown RBP23.73■■□□□ 1.39
CLDND1-221ENST00000510541 SEPT12Q8IYM1 358 aa23.72■■□□□ 1.39
CLDND1-221ENST00000510541 STRN4Q9NRL3 753 aa23.72■■□□□ 1.39
CLDND1-221ENST00000510541 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
CLDND1-221ENST00000510541 KNSTRNQ9Y448 316 aa23.71■■□□□ 1.39
CLDND1-221ENST00000510541 RGPD5Q99666 1765 aa23.7■■□□□ 1.39
CLDND1-221ENST00000510541 AMER1Q5JTC6 1135 aaPredicted RBP23.7■■□□□ 1.38
CLDND1-221ENST00000510541 POLR3GLQ9BT43 218 aa23.7■■□□□ 1.38
CLDND1-221ENST00000510541 HOXC9P31274 260 aa23.69■■□□□ 1.38
CLDND1-221ENST00000510541 INSRP06213 1382 aa23.68■■□□□ 1.38
CLDND1-221ENST00000510541 FLT4P35916 1363 aa23.68■■□□□ 1.38
CLDND1-221ENST00000510541 PARP4Q9UKK3 1724 aaKnown RBP23.68■■□□□ 1.38
CLDND1-221ENST00000510541 FAM98CQ17RN3 349 aaKnown RBP23.68■■□□□ 1.38
CLDND1-221ENST00000510541 CCDC125Q86Z20 511 aa23.68■■□□□ 1.38
CLDND1-221ENST00000510541 SOX12O15370 315 aa23.66■■□□□ 1.38
CLDND1-221ENST00000510541 TOM1L2Q6ZVM7 507 aa23.66■■□□□ 1.38
CLDND1-221ENST00000510541 KRT27Q7Z3Y8 459 aa23.66■■□□□ 1.38
CLDND1-221ENST00000510541 DISP2A7MBM2 1401 aa23.66■■□□□ 1.38
CLDND1-221ENST00000510541 SMG6Q86US8 1419 aaKnown RBP23.66■■□□□ 1.38
CLDND1-221ENST00000510541 BRWD3Q6RI45 1802 aa23.66■■□□□ 1.38
CLDND1-221ENST00000510541 AMPHP49418 695 aa23.64■■□□□ 1.37
CLDND1-221ENST00000510541 ANKRD24Q8TF21 1146 aa23.64■■□□□ 1.37
CLDND1-221ENST00000510541 UPF1Q92900 1129 aaKnown RBP eCLIP23.64■■□□□ 1.37
CLDND1-221ENST00000510541 EP400Q96L91 3159 aa23.64■■□□□ 1.37
CLDND1-221ENST00000510541 BCL9O00512 1426 aa23.63■■□□□ 1.37
CLDND1-221ENST00000510541 WNK3Q9BYP7 1800 aa23.63■■□□□ 1.37
CLDND1-221ENST00000510541 PLEKHG2Q9H7P9 1386 aa23.62■■□□□ 1.37
CLDND1-221ENST00000510541 MAP2P11137 1827 aaKnown RBP23.61■■□□□ 1.37
CLDND1-221ENST00000510541 ZBTB7CA1YPR0 619 aa23.61■■□□□ 1.37
CLDND1-221ENST00000510541 RRS1Q15050 365 aaKnown RBP23.61■■□□□ 1.37
CLDND1-221ENST00000510541 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
CLDND1-221ENST00000510541 PEAK1Q9H792 1746 aa23.6■■□□□ 1.37
CLDND1-221ENST00000510541 CSB-PGBD3P0DP91 1061 aa23.6■■□□□ 1.37
CLDND1-221ENST00000510541 NCAPD2Q15021 1401 aa23.59■■□□□ 1.37
CLDND1-221ENST00000510541 FBLN1P23142 703 aa23.58■■□□□ 1.37
CLDND1-221ENST00000510541 USP35Q9P2H5 1018 aa23.57■■□□□ 1.36
CLDND1-221ENST00000510541 MORC1Q86VD1 984 aa23.56■■□□□ 1.36
CLDND1-221ENST00000510541 FAM196AQ6ZSG2 479 aa23.55■■□□□ 1.36
CLDND1-221ENST00000510541 NLRP2Q9NX02 1062 aa23.55■■□□□ 1.36
CLDND1-221ENST00000510541 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
CLDND1-221ENST00000510541 LRRC37A3O60309 1634 aa23.55■■□□□ 1.36
CLDND1-221ENST00000510541 IL2RBP14784 551 aa23.54■■□□□ 1.36
CLDND1-221ENST00000510541 HSP90AB2PQ58FF8 381 aa23.54■■□□□ 1.36
CLDND1-221ENST00000510541 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
CLDND1-221ENST00000510541 DDB1Q16531 1140 aa23.53■■□□□ 1.36
CLDND1-221ENST00000510541 TNS2Q63HR2 1409 aa23.52■■□□□ 1.36
CLDND1-221ENST00000510541 A0A0G2JS52 829 aa23.51■■□□□ 1.35
CLDND1-221ENST00000510541 EXOC5O00471 708 aa23.51■■□□□ 1.35
CLDND1-221ENST00000510541 MYT1Q01538 1121 aa23.51■■□□□ 1.35
CLDND1-221ENST00000510541 OVOS2A0A0G2JMS6 1433 aa23.5■■□□□ 1.35
CLDND1-221ENST00000510541 NBPF6Q5VWK0 638 aa23.49■■□□□ 1.35
CLDND1-221ENST00000510541 NBPF4Q96M43 638 aa23.49■■□□□ 1.35
CLDND1-221ENST00000510541 RGPD1P0DJD0 1748 aa23.45■■□□□ 1.34
CLDND1-221ENST00000510541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.45■■□□□ 1.34
CLDND1-221ENST00000510541 LTV1Q96GA3 475 aaPredicted RBP23.44■■□□□ 1.34
CLDND1-221ENST00000510541 RGPD2P0DJD1 1756 aa23.44■■□□□ 1.34
CLDND1-221ENST00000510541 IGSF1Q8N6C5 1336 aa23.43■■□□□ 1.34
CLDND1-221ENST00000510541 EIF4A2Q14240 407 aaKnown RBP23.43■■□□□ 1.34
CLDND1-221ENST00000510541 MARCH10Q8NA82 808 aaPredicted RBP23.43■■□□□ 1.34
CLDND1-221ENST00000510541 EYA1Q99502 592 aa23.42■■□□□ 1.34
CLDND1-221ENST00000510541 PARD3Q8TEW0 1356 aa23.41■■□□□ 1.34
CLDND1-221ENST00000510541 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
CLDND1-221ENST00000510541 TNNT2P45379 298 aaPredicted RBP23.41■■□□□ 1.34
CLDND1-221ENST00000510541 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
CLDND1-221ENST00000510541 RAPGEF4Q8WZA2 1011 aa23.41■■□□□ 1.34
CLDND1-221ENST00000510541 MEGF6O75095 1541 aa23.4■■□□□ 1.34
CLDND1-221ENST00000510541 MTHFSP49914 203 aa23.4■■□□□ 1.34
CLDND1-221ENST00000510541 SF3B2Q13435 895 aaKnown RBP23.4■■□□□ 1.34
CLDND1-221ENST00000510541 KDRP35968 1356 aa23.4■■□□□ 1.34
CLDND1-221ENST00000510541 SBF2Q86WG5 1849 aa23.39■■□□□ 1.33
CLDND1-221ENST00000510541 TNS1Q9HBL0 1735 aaKnown RBP23.39■■□□□ 1.33
CLDND1-221ENST00000510541 IL13P35225 146 aa23.38■■□□□ 1.33
CLDND1-221ENST00000510541 ZCRB1Q8TBF4 217 aaKnown RBP23.38■■□□□ 1.33
CLDND1-221ENST00000510541 PKD1L3Q7Z443 1732 aa23.37■■□□□ 1.33
CLDND1-221ENST00000510541 TATP17735 454 aaPredicted RBP23.37■■□□□ 1.33
CLDND1-221ENST00000510541 BCL11BQ9C0K0 894 aaPredicted RBP23.37■■□□□ 1.33
CLDND1-221ENST00000510541 RGPD3A6NKT7 1758 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms