RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 RAPGEF3O95398 923 aa11.06□□□□□ -0.64
TRIO-214ENST00000509967 CYP46A1Q9Y6A2 500 aa11.06□□□□□ -0.64
TRIO-214ENST00000509967 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
TRIO-214ENST00000509967 ADGRL1O94910 1474 aa11.05□□□□□ -0.64
TRIO-214ENST00000509967 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
TRIO-214ENST00000509967 SURF6O75683 361 aaKnown RBP11.05□□□□□ -0.64
TRIO-214ENST00000509967 FOXD4L5Q5VV16 416 aaPredicted RBP11.05□□□□□ -0.64
TRIO-214ENST00000509967 FOXD4L4Q8WXT5 416 aaPredicted RBP11.05□□□□□ -0.64
TRIO-214ENST00000509967 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
TRIO-214ENST00000509967 HOMER1Q86YM7 354 aa11.05□□□□□ -0.64
TRIO-214ENST00000509967 AK7Q96M32 723 aa11.05□□□□□ -0.64
TRIO-214ENST00000509967 CCDC192P0DO97 292 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 TMEM132EQ6IEE7 984 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 MNS1Q8NEH6 495 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 PLB1Q6P1J6 1458 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 TATP17735 454 aaPredicted RBP11.04□□□□□ -0.64
TRIO-214ENST00000509967 SMARCE1Q969G3 411 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 SPG7Q9UQ90 795 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 CDKL5O76039 1030 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 APPP05067 770 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 NEK4P51957 841 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 VPS37DQ86XT2 251 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 KCNH5Q8NCM2 988 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 CTNNA3Q9UI47 895 aa11.04□□□□□ -0.64
TRIO-214ENST00000509967 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 NOM1Q5C9Z4 860 aaKnown RBP11.03□□□□□ -0.64
TRIO-214ENST00000509967 TRIM34Q9BYJ4 488 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 MYO6Q9UM54 1294 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 TMPOP42166 694 aaKnown RBP11.03□□□□□ -0.64
TRIO-214ENST00000509967 KRT85P78386 507 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 FILIP1LQ4L180 1135 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 HDGFL1Q5TGJ6 251 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 TXNDC2Q86VQ3 553 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 SLC12A5Q9H2X9 1139 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 PTPRCP08575 1304 aa11.03□□□□□ -0.64
TRIO-214ENST00000509967 TTC21BQ7Z4L5 1316 aa11.02□□□□□ -0.64
TRIO-214ENST00000509967 CBFA2T2O43439 604 aa11.02□□□□□ -0.64
TRIO-214ENST00000509967 TXLNAP40222 546 aa11.02□□□□□ -0.64
TRIO-214ENST00000509967 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.64
TRIO-214ENST00000509967 KIF2AO00139 706 aaPredicted RBP11.02□□□□□ -0.65
TRIO-214ENST00000509967 CCDC158Q5M9N0 1113 aa11.02□□□□□ -0.65
TRIO-214ENST00000509967 UBE2Q2Q8WVN8 375 aa11.02□□□□□ -0.65
TRIO-214ENST00000509967 GNL3LQ9NVN8 582 aaKnown RBP11.02□□□□□ -0.65
TRIO-214ENST00000509967 CFAP45Q9UL16 551 aa11.02□□□□□ -0.65
TRIO-214ENST00000509967 GPATCH8Q9UKJ3 1502 aaKnown RBP11.02□□□□□ -0.65
TRIO-214ENST00000509967 SDF4Q9BRK5 362 aa11.02□□□□□ -0.65
TRIO-214ENST00000509967 CWC15Q9P013 229 aaKnown RBP11.02□□□□□ -0.65
TRIO-214ENST00000509967 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
TRIO-214ENST00000509967 PES1O00541 588 aaKnown RBP11.01□□□□□ -0.65
TRIO-214ENST00000509967 MCM4P33991 863 aa11.01□□□□□ -0.65
TRIO-214ENST00000509967 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
TRIO-214ENST00000509967 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
TRIO-214ENST00000509967 ABTB2Q8N961 1025 aa11.01□□□□□ -0.65
TRIO-214ENST00000509967 ASXL1Q8IXJ9 1541 aa11.01□□□□□ -0.65
TRIO-214ENST00000509967 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
TRIO-214ENST00000509967 C11orf95C9JLR9 678 aaPredicted RBP11□□□□□ -0.65
TRIO-214ENST00000509967 WASF1Q92558 559 aa11□□□□□ -0.65
TRIO-214ENST00000509967 SH2B1Q9NRF2 756 aaPredicted RBP11□□□□□ -0.65
TRIO-214ENST00000509967 CABP1Q9NZU7 370 aa11□□□□□ -0.65
TRIO-214ENST00000509967 BCAR3O75815 825 aa11□□□□□ -0.65
TRIO-214ENST00000509967 PDCL2Q8N4E4 241 aa11□□□□□ -0.65
TRIO-214ENST00000509967 ARHGAP45Q92619 1136 aa11□□□□□ -0.65
TRIO-214ENST00000509967 NACAP1Q9BZK3 213 aa11□□□□□ -0.65
TRIO-214ENST00000509967 LUC7LQ9NQ29 371 aaKnown RBP11□□□□□ -0.65
TRIO-214ENST00000509967 CCDC66A2RUB6 948 aa11□□□□□ -0.65
TRIO-214ENST00000509967 WASHC4Q2M389 1173 aa11□□□□□ -0.65
TRIO-214ENST00000509967 ADAMTS12P58397 1594 aa11□□□□□ -0.65
TRIO-214ENST00000509967 CCDC27Q2M243 656 aa10.99□□□□□ -0.65
TRIO-214ENST00000509967 GRPEL1Q9HAV7 217 aa10.99□□□□□ -0.65
TRIO-214ENST00000509967 NLRP2Q9NX02 1062 aa10.99□□□□□ -0.65
TRIO-214ENST00000509967 RARSP54136 660 aaKnown RBP10.99□□□□□ -0.65
TRIO-214ENST00000509967 RUFY1Q96T51 708 aa10.99□□□□□ -0.65
TRIO-214ENST00000509967 AMOTQ4VCS5 1084 aa10.99□□□□□ -0.65
TRIO-214ENST00000509967 SULT6B1Q6IMI4 303 aa10.99□□□□□ -0.65
TRIO-214ENST00000509967 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
TRIO-214ENST00000509967 RDXP35241 583 aaKnown RBP10.99□□□□□ -0.65
TRIO-214ENST00000509967 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
TRIO-214ENST00000509967 ZNF771Q7L3S4 317 aaPredicted RBP10.99□□□□□ -0.65
TRIO-214ENST00000509967 TCEAL9Q9UHQ7 104 aa10.99□□□□□ -0.65
TRIO-214ENST00000509967 KIF1BPQ96EK5 621 aa10.98□□□□□ -0.65
TRIO-214ENST00000509967 TRIM22Q8IYM9 498 aa10.98□□□□□ -0.65
TRIO-214ENST00000509967 NEUROD6Q96NK8 337 aa10.98□□□□□ -0.65
TRIO-214ENST00000509967 GLRX3O76003 335 aaKnown RBP10.98□□□□□ -0.65
TRIO-214ENST00000509967 CREBRFQ8IUR6 639 aa10.98□□□□□ -0.65
TRIO-214ENST00000509967 TRIM5Q9C035 493 aa10.98□□□□□ -0.65
TRIO-214ENST00000509967 MCM5P33992 734 aa10.98□□□□□ -0.65
TRIO-214ENST00000509967 DENND4BO75064 1496 aaPredicted RBP10.98□□□□□ -0.65
TRIO-214ENST00000509967 PIK3C2GO75747 1445 aa10.97□□□□□ -0.65
TRIO-214ENST00000509967 CAVIN2O95810 425 aa10.97□□□□□ -0.65
TRIO-214ENST00000509967 HMGB1P09429 215 aaKnown RBP10.97□□□□□ -0.65
TRIO-214ENST00000509967 RBM33Q96EV2 1170 aaKnown RBP10.97□□□□□ -0.65
TRIO-214ENST00000509967 SOS1Q07889 1333 aaPredicted RBP10.97□□□□□ -0.65
TRIO-214ENST00000509967 STK38Q15208 465 aa10.97□□□□□ -0.65
TRIO-214ENST00000509967 ZNF592Q92610 1267 aa10.97□□□□□ -0.65
TRIO-214ENST00000509967 GNAT3A8MTJ3 354 aa10.97□□□□□ -0.65
TRIO-214ENST00000509967 BLOC1S2Q6QNY1 142 aa10.97□□□□□ -0.65
TRIO-214ENST00000509967 PRPF40AO75400 957 aaKnown RBP10.97□□□□□ -0.65
TRIO-214ENST00000509967 NPC1L1Q9UHC9 1359 aa10.97□□□□□ -0.65
TRIO-214ENST00000509967 PLCH2O75038 1416 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms