RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZNF428Q96B54 188 aa22.75■■□□□ 1.23
SFXN1-208ENST00000507823 ZNF853P0CG23 659 aa22.74■■□□□ 1.23
SFXN1-208ENST00000507823 LMOD3Q0VAK6 560 aa22.74■■□□□ 1.23
SFXN1-208ENST00000507823 NGDNQ8NEJ9 315 aaKnown RBP22.74■■□□□ 1.23
SFXN1-208ENST00000507823 COG6Q9Y2V7 657 aa22.74■■□□□ 1.23
SFXN1-208ENST00000507823 RLBP1P12271 317 aa22.73■■□□□ 1.23
SFXN1-208ENST00000507823 BRPF1P55201 1214 aaPredicted RBP22.73■■□□□ 1.23
SFXN1-208ENST00000507823 FRAT1Q92837 279 aaPredicted RBP22.73■■□□□ 1.23
SFXN1-208ENST00000507823 NPHP4O75161 1426 aaPredicted RBP22.73■■□□□ 1.23
SFXN1-208ENST00000507823 NWD1Q149M9 1564 aa22.73■■□□□ 1.23
SFXN1-208ENST00000507823 SBNO1A3KN83 1393 aa22.73■■□□□ 1.23
SFXN1-208ENST00000507823 IFT57Q9NWB7 429 aa22.73■■□□□ 1.23
SFXN1-208ENST00000507823 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
SFXN1-208ENST00000507823 ZKSCAN2Q63HK3 967 aa22.72■■□□□ 1.23
SFXN1-208ENST00000507823 ADGRL3Q9HAR2 1447 aa22.72■■□□□ 1.23
SFXN1-208ENST00000507823 ALDH1L2Q3SY69 923 aa22.72■■□□□ 1.23
SFXN1-208ENST00000507823 ARHGEF10O15013 1369 aa22.71■■□□□ 1.23
SFXN1-208ENST00000507823 SSH1Q8WYL5 1049 aa22.71■■□□□ 1.23
SFXN1-208ENST00000507823 BACH2Q9BYV9 841 aa22.71■■□□□ 1.23
SFXN1-208ENST00000507823 FLT4P35916 1363 aa22.7■■□□□ 1.23
SFXN1-208ENST00000507823 BCL2L13Q9BXK5 485 aa22.7■■□□□ 1.22
SFXN1-208ENST00000507823 MAP3K19Q56UN5 1328 aa22.7■■□□□ 1.22
SFXN1-208ENST00000507823 MSH5O43196 834 aa22.7■■□□□ 1.22
SFXN1-208ENST00000507823 PDE4AP27815 886 aa22.69■■□□□ 1.22
SFXN1-208ENST00000507823 GNAI1P63096 354 aa22.69■■□□□ 1.22
SFXN1-208ENST00000507823 TNNQ9UQP3 1299 aa22.69■■□□□ 1.22
SFXN1-208ENST00000507823 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
SFXN1-208ENST00000507823 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
SFXN1-208ENST00000507823 MVPQ14764 893 aaKnown RBP22.67■■□□□ 1.22
SFXN1-208ENST00000507823 KDRP35968 1356 aa22.67■■□□□ 1.22
SFXN1-208ENST00000507823 IGHDP01880 384 aa22.66■■□□□ 1.22
SFXN1-208ENST00000507823 DZIP1LQ8IYY4 767 aaKnown RBP22.66■■□□□ 1.22
SFXN1-208ENST00000507823 KIF16BQ96L93 1317 aa22.66■■□□□ 1.22
SFXN1-208ENST00000507823 SULT6B1Q6IMI4 303 aa22.65■■□□□ 1.22
SFXN1-208ENST00000507823 CFAP44Q96MT7 982 aa22.65■■□□□ 1.22
SFXN1-208ENST00000507823 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
SFXN1-208ENST00000507823 ATF7IPQ6VMQ6 1270 aa22.64■■□□□ 1.22
SFXN1-208ENST00000507823 TRIM27P14373 513 aa22.64■■□□□ 1.21
SFXN1-208ENST00000507823 PHF8Q9UPP1 1060 aa22.63■■□□□ 1.21
SFXN1-208ENST00000507823 VAMP4O75379 141 aa22.62■■□□□ 1.21
SFXN1-208ENST00000507823 SKAP1Q86WV1 359 aa22.62■■□□□ 1.21
SFXN1-208ENST00000507823 THUMPD2Q9BTF0 503 aaKnown RBP22.62■■□□□ 1.21
SFXN1-208ENST00000507823 MBIPQ9NS73 344 aa22.62■■□□□ 1.21
SFXN1-208ENST00000507823 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
SFXN1-208ENST00000507823 IPO8O15397 1037 aaKnown RBP22.61■■□□□ 1.21
SFXN1-208ENST00000507823 PCDHB15Q9Y5E8 787 aa22.61■■□□□ 1.21
SFXN1-208ENST00000507823 NOB1Q9ULX3 412 aaKnown RBP22.61■■□□□ 1.21
SFXN1-208ENST00000507823 NLRP6P59044 892 aa22.6■■□□□ 1.21
SFXN1-208ENST00000507823 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
SFXN1-208ENST00000507823 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
SFXN1-208ENST00000507823 ARHGAP45Q92619 1136 aa22.59■■□□□ 1.21
SFXN1-208ENST00000507823 PHRF1Q9P1Y6 1649 aaKnown RBP22.58■■□□□ 1.21
SFXN1-208ENST00000507823 DDX19BQ9UMR2 479 aa22.58■■□□□ 1.21
SFXN1-208ENST00000507823 NFAT5O94916 1531 aa22.57■■□□□ 1.2
SFXN1-208ENST00000507823 MRPL50Q8N5N7 158 aaKnown RBP22.57■■□□□ 1.2
SFXN1-208ENST00000507823 FAM83GA6ND36 823 aa22.56■■□□□ 1.2
SFXN1-208ENST00000507823 LAS1LQ9Y4W2 734 aaKnown RBP22.56■■□□□ 1.2
SFXN1-208ENST00000507823 CRB1P82279 1406 aa22.56■■□□□ 1.2
SFXN1-208ENST00000507823 HOXC9P31274 260 aa22.55■■□□□ 1.2
SFXN1-208ENST00000507823 ANP32AP39687 249 aaKnown RBP22.55■■□□□ 1.2
SFXN1-208ENST00000507823 AMPHP49418 695 aa22.55■■□□□ 1.2
SFXN1-208ENST00000507823 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
SFXN1-208ENST00000507823 CHL1O00533 1208 aa22.55■■□□□ 1.2
SFXN1-208ENST00000507823 ABTB2Q8N961 1025 aa22.55■■□□□ 1.2
SFXN1-208ENST00000507823 EYA1Q99502 592 aa22.55■■□□□ 1.2
SFXN1-208ENST00000507823 ANP32EQ9BTT0 268 aa22.54■■□□□ 1.2
SFXN1-208ENST00000507823 KIAA0232Q92628 1395 aa22.54■■□□□ 1.2
SFXN1-208ENST00000507823 RWDD1Q9H446 243 aaPredicted RBP22.54■■□□□ 1.2
SFXN1-208ENST00000507823 LTN1O94822 1766 aa22.54■■□□□ 1.2
SFXN1-208ENST00000507823 FAM161AQ3B820 660 aa22.53■■□□□ 1.2
SFXN1-208ENST00000507823 VIRMAQ69YN4 1812 aaKnown RBP22.53■■□□□ 1.2
SFXN1-208ENST00000507823 LRRC37A3O60309 1634 aa22.53■■□□□ 1.2
SFXN1-208ENST00000507823 SOX12O15370 315 aa22.53■■□□□ 1.2
SFXN1-208ENST00000507823 HDAC1Q13547 482 aaPredicted RBP22.52■■□□□ 1.2
SFXN1-208ENST00000507823 TWISTNBQ3B726 338 aaPredicted RBP22.52■■□□□ 1.2
SFXN1-208ENST00000507823 TMEM57Q8N5G2 664 aa22.52■■□□□ 1.2
SFXN1-208ENST00000507823 DCTN1Q14203 1278 aa22.52■■□□□ 1.2
SFXN1-208ENST00000507823 C8orf34Q49A92 452 aa22.52■■□□□ 1.2
SFXN1-208ENST00000507823 C8orf58Q8NAV2 365 aa22.52■■□□□ 1.2
SFXN1-208ENST00000507823 IPO9Q96P70 1041 aaKnown RBP22.52■■□□□ 1.2
SFXN1-208ENST00000507823 ZBTB40Q9NUA8 1239 aa22.52■■□□□ 1.2
SFXN1-208ENST00000507823 KIF1AQ12756 1690 aa22.5■■□□□ 1.19
SFXN1-208ENST00000507823 MST1RQ04912 1400 aa22.5■■□□□ 1.19
SFXN1-208ENST00000507823 HTATSF1O43719 755 aaKnown RBP22.5■■□□□ 1.19
SFXN1-208ENST00000507823 SLIT3O75094 1523 aa22.5■■□□□ 1.19
SFXN1-208ENST00000507823 TRPM3Q9HCF6 1732 aaPredicted RBP22.5■■□□□ 1.19
SFXN1-208ENST00000507823 MTHFSDQ2M296 383 aaKnown RBP22.49■■□□□ 1.19
SFXN1-208ENST00000507823 ITPRIPQ8IWB1 547 aa22.49■■□□□ 1.19
SFXN1-208ENST00000507823 GAS2L2Q8NHY3 880 aa22.49■■□□□ 1.19
SFXN1-208ENST00000507823 ABCC4O15439 1325 aa22.49■■□□□ 1.19
SFXN1-208ENST00000507823 HAP1P54257 671 aaPredicted RBP22.48■■□□□ 1.19
SFXN1-208ENST00000507823 RBM33Q96EV2 1170 aaKnown RBP22.48■■□□□ 1.19
SFXN1-208ENST00000507823 ESCO1Q5FWF5 840 aa22.47■■□□□ 1.19
SFXN1-208ENST00000507823 RGS3P49796 1198 aa22.47■■□□□ 1.19
SFXN1-208ENST00000507823 PAK3O75914 559 aaPredicted RBP22.46■■□□□ 1.19
SFXN1-208ENST00000507823 IP6K1Q92551 441 aa22.46■■□□□ 1.19
SFXN1-208ENST00000507823 NUTM2GQ5VZR2 741 aa22.46■■□□□ 1.19
SFXN1-208ENST00000507823 MCM10Q7L590 875 aa22.46■■□□□ 1.19
SFXN1-208ENST00000507823 NCOA3Q9Y6Q9 1424 aa22.46■■□□□ 1.19
SFXN1-208ENST00000507823 KCNH5Q8NCM2 988 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms