RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 NBPF20Q3BBV1 942 aa7.5□□□□□ -1.21
AFP-203ENST00000506820 TRIM46Q7Z4K8 759 aa7.5□□□□□ -1.21
AFP-203ENST00000506820 DZIP3Q86Y13 1208 aaKnown RBP7.5□□□□□ -1.21
AFP-203ENST00000506820 ITPKCQ96DU7 683 aa7.5□□□□□ -1.21
AFP-203ENST00000506820 ZFP42Q96MM3 310 aa7.5□□□□□ -1.21
AFP-203ENST00000506820 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
AFP-203ENST00000506820 ZNF592Q92610 1267 aa7.49□□□□□ -1.21
AFP-203ENST00000506820 PURBQ96QR8 312 aaKnown RBP7.49□□□□□ -1.21
AFP-203ENST00000506820 KCTD15Q96SI1 283 aaPredicted RBP7.49□□□□□ -1.21
AFP-203ENST00000506820 KLF16Q9BXK1 252 aaPredicted RBP7.49□□□□□ -1.21
AFP-203ENST00000506820 TERTO14746 1132 aaKnown RBP7.48□□□□□ -1.21
AFP-203ENST00000506820 NR3C2P08235 984 aa7.48□□□□□ -1.21
AFP-203ENST00000506820 BMP2P12643 396 aa7.48□□□□□ -1.21
AFP-203ENST00000506820 BANK1Q8NDB2 785 aa7.48□□□□□ -1.21
AFP-203ENST00000506820 ADAM32Q8TC27 787 aa7.48□□□□□ -1.21
AFP-203ENST00000506820 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
AFP-203ENST00000506820 ZFAND3Q9H8U3 227 aa7.48□□□□□ -1.21
AFP-203ENST00000506820 PRM3Q9NNZ6 103 aa7.48□□□□□ -1.21
AFP-203ENST00000506820 ZNF330Q9Y3S2 320 aaPredicted RBP7.48□□□□□ -1.21
AFP-203ENST00000506820 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
AFP-203ENST00000506820 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
AFP-203ENST00000506820 HMX1Q9NP08 348 aaPredicted RBP7.47□□□□□ -1.21
AFP-203ENST00000506820 NXF1Q9UBU9 619 aaKnown RBP7.47□□□□□ -1.21
AFP-203ENST00000506820 MAN1A2O60476 641 aa7.46□□□□□ -1.22
AFP-203ENST00000506820 C6orf118Q5T5N4 469 aa7.46□□□□□ -1.22
AFP-203ENST00000506820 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.22
AFP-203ENST00000506820 EPS8L1Q8TE68 723 aa7.46□□□□□ -1.22
AFP-203ENST00000506820 PPP1R26Q5T8A7 1209 aaPredicted RBP7.45□□□□□ -1.22
AFP-203ENST00000506820 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
AFP-203ENST00000506820 ZBBXA8MT70 800 aa7.44□□□□□ -1.22
AFP-203ENST00000506820 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
AFP-203ENST00000506820 CCDC125Q86Z20 511 aa7.44□□□□□ -1.22
AFP-203ENST00000506820 MEIOBQ8N635 442 aa7.44□□□□□ -1.22
AFP-203ENST00000506820 SOCS7O14512 581 aa7.42□□□□□ -1.22
AFP-203ENST00000506820 NFX1Q12986 1120 aaKnown RBP7.42□□□□□ -1.22
AFP-203ENST00000506820 SEPT12Q8IYM1 358 aa7.42□□□□□ -1.22
AFP-203ENST00000506820 IRF7Q92985 503 aa7.42□□□□□ -1.22
AFP-203ENST00000506820 NDUFB9Q9Y6M9 179 aa7.42□□□□□ -1.22
AFP-203ENST00000506820 RAB15P59190 212 aa7.41□□□□□ -1.22
AFP-203ENST00000506820 INSM1Q01101 510 aaPredicted RBP7.41□□□□□ -1.22
AFP-203ENST00000506820 INTS6LQ5JSJ4 861 aaKnown RBP7.41□□□□□ -1.22
AFP-203ENST00000506820 RNF20Q5VTR2 975 aa7.41□□□□□ -1.22
AFP-203ENST00000506820 TRIM34Q9BYJ4 488 aa7.41□□□□□ -1.22
AFP-203ENST00000506820 ESF1Q9H501 851 aaKnown RBP7.41□□□□□ -1.22
AFP-203ENST00000506820 PCDHB9Q9Y5E1 797 aa7.41□□□□□ -1.22
AFP-203ENST00000506820 Q6ZVU0 165 aa7.4□□□□□ -1.22
AFP-203ENST00000506820 OCSTAMPQ9BR26 566 aa7.4□□□□□ -1.22
AFP-203ENST00000506820 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.39□□□□□ -1.233e-54■□□□□ 10.4
AFP-203ENST00000506820 GJD4Q96KN9 370 aaPredicted RBP7.39□□□□□ -1.23
AFP-203ENST00000506820 TTLL8A6PVC2 850 aa7.38□□□□□ -1.23
AFP-203ENST00000506820 NR1H3Q13133 447 aa7.38□□□□□ -1.23
AFP-203ENST00000506820 CBLBQ13191 982 aa7.38□□□□□ -1.23
AFP-203ENST00000506820 SOS2Q07890 1332 aaPredicted RBP7.37□□□□□ -1.23
AFP-203ENST00000506820 ERVH48-1M5A8F1 160 aa7.37□□□□□ -1.23
AFP-203ENST00000506820 WIPF1O43516 503 aa7.37□□□□□ -1.23
AFP-203ENST00000506820 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
AFP-203ENST00000506820 ESPNB1AK53 854 aa7.36□□□□□ -1.23
AFP-203ENST00000506820 H3BM21 787 aa7.36□□□□□ -1.23
AFP-203ENST00000506820 SPINT1O43278 529 aa7.36□□□□□ -1.23
AFP-203ENST00000506820 FBXO45P0C2W1 286 aa7.36□□□□□ -1.23
AFP-203ENST00000506820 RELBQ01201 579 aa7.36□□□□□ -1.23
AFP-203ENST00000506820 TMPRSS4Q9NRS4 437 aa7.36□□□□□ -1.23
AFP-203ENST00000506820 FAM181BA6NEQ2 426 aa7.35□□□□□ -1.23
AFP-203ENST00000506820 SOBPA7XYQ1 873 aa7.35□□□□□ -1.23
AFP-203ENST00000506820 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
AFP-203ENST00000506820 POLMQ9NP87 494 aaPredicted RBP7.35□□□□□ -1.23
AFP-203ENST00000506820 GIGYF1O75420 1035 aaPredicted RBP7.34□□□□□ -1.23
AFP-203ENST00000506820 VEGFBP49765 207 aa7.34□□□□□ -1.23
AFP-203ENST00000506820 MTMR14Q8NCE2 650 aa7.34□□□□□ -1.23
AFP-203ENST00000506820 SNRKQ9NRH2 765 aa7.34□□□□□ -1.23
AFP-203ENST00000506820 FIGNL2A6NMB9 653 aa7.33□□□□□ -1.24
AFP-203ENST00000506820 ADH1AP07327 375 aa7.33□□□□□ -1.24
AFP-203ENST00000506820 EIF4G2P78344 907 aaKnown RBP eCLIP7.33□□□□□ -1.24
AFP-203ENST00000506820 AGBL1Q96MI9 1066 aa7.33□□□□□ -1.24
AFP-203ENST00000506820 DNMT3LQ9UJW3 386 aa7.33□□□□□ -1.24
AFP-203ENST00000506820 PRKCSHP14314 528 aaPredicted RBP7.32□□□□□ -1.24
AFP-203ENST00000506820 ZNF395Q9H8N7 513 aaPredicted RBP7.32□□□□□ -1.24
AFP-203ENST00000506820 CYLDQ9NQC7 956 aa7.32□□□□□ -1.24
AFP-203ENST00000506820 STK17AQ9UEE5 414 aa7.32□□□□□ -1.24
AFP-203ENST00000506820 ATP5J2-PTCD1G3V325 749 aa7.31□□□□□ -1.24
AFP-203ENST00000506820 PTGIRP43119 386 aa7.31□□□□□ -1.24
AFP-203ENST00000506820 INSM2Q96T92 566 aaPredicted RBP7.31□□□□□ -1.24
AFP-203ENST00000506820 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
AFP-203ENST00000506820 GMPRP36959 345 aa7.3□□□□□ -1.24
AFP-203ENST00000506820 PTSQ03393 145 aa7.3□□□□□ -1.24
AFP-203ENST00000506820 CC2D2BQ6DHV5 1058 aa7.3□□□□□ -1.24
AFP-203ENST00000506820 WWC1Q8IX03 1113 aa7.3□□□□□ -1.24
AFP-203ENST00000506820 LILRA1O75019 489 aa7.29□□□□□ -1.24
AFP-203ENST00000506820 MYCP01106 439 aaPredicted RBP7.29□□□□□ -1.24
AFP-203ENST00000506820 ADD1P35611 737 aaKnown RBP7.29□□□□□ -1.24
AFP-203ENST00000506820 CTSOP43234 321 aaPredicted RBP7.29□□□□□ -1.24
AFP-203ENST00000506820 CYP2U1Q7Z449 544 aa7.29□□□□□ -1.24
AFP-203ENST00000506820 NLRP3Q96P20 1036 aa7.29□□□□□ -1.24
AFP-203ENST00000506820 PCDHB11Q9Y5F2 797 aa7.29□□□□□ -1.24
AFP-203ENST00000506820 WASHC4Q2M389 1173 aa7.28□□□□□ -1.24
AFP-203ENST00000506820 LYSMD3Q7Z3D4 306 aa7.28□□□□□ -1.24
AFP-203ENST00000506820 TBC1D2BQ9UPU7 963 aa7.28□□□□□ -1.24
AFP-203ENST00000506820 MEN1O00255 615 aa7.27□□□□□ -1.25
AFP-203ENST00000506820 CCDC155Q8N6L0 562 aa7.27□□□□□ -1.25
AFP-203ENST00000506820 ZSCAN1Q8NBB4 408 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms