RNA–Protein interactions for RNA: ENST00000506727.1

PKD2-204, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 4

Gene PKD2, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-204ENST00000506727 KIAA0232Q92628 1395 aa13.08□□□□□ -0.31
PKD2-204ENST00000506727 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
PKD2-204ENST00000506727 RGPD8O14715 1765 aaPredicted RBP13.08□□□□□ -0.32
PKD2-204ENST00000506727 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
PKD2-204ENST00000506727 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
PKD2-204ENST00000506727 BCL9O00512 1426 aa13.07□□□□□ -0.32
PKD2-204ENST00000506727 EVA1CP58658 441 aa13.07□□□□□ -0.32
PKD2-204ENST00000506727 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
PKD2-204ENST00000506727 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
PKD2-204ENST00000506727 MLLT1Q03111 559 aaPredicted RBP13.06□□□□□ -0.32
PKD2-204ENST00000506727 FSTL1Q12841 308 aa13.06□□□□□ -0.32
PKD2-204ENST00000506727 TULP4Q9NRJ4 1543 aa13.06□□□□□ -0.32
PKD2-204ENST00000506727 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
PKD2-204ENST00000506727 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
PKD2-204ENST00000506727 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
PKD2-204ENST00000506727 KIAA1210Q9ULL0 1709 aa13.03□□□□□ -0.32
PKD2-204ENST00000506727 RGS19P49795 217 aa13.03□□□□□ -0.32
PKD2-204ENST00000506727 ZNF827Q17R98 1081 aa13.03□□□□□ -0.32
PKD2-204ENST00000506727 CLTCL1P53675 1640 aa13.02□□□□□ -0.32
PKD2-204ENST00000506727 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
PKD2-204ENST00000506727 ABCC11Q96J66 1382 aa13□□□□□ -0.33
PKD2-204ENST00000506727 USP19O94966 1318 aa13□□□□□ -0.33
PKD2-204ENST00000506727 DDB1Q16531 1140 aa13□□□□□ -0.33
PKD2-204ENST00000506727 NMRK2Q9NPI5 230 aa13□□□□□ -0.33
PKD2-204ENST00000506727 PRDM10Q9NQV6 1147 aa13□□□□□ -0.33
PKD2-204ENST00000506727 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
PKD2-204ENST00000506727 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
PKD2-204ENST00000506727 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
PKD2-204ENST00000506727 ZC3H6P61129 1189 aaKnown RBP12.99□□□□□ -0.33
PKD2-204ENST00000506727 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
PKD2-204ENST00000506727 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
PKD2-204ENST00000506727 STK26Q9P289 416 aa12.99□□□□□ -0.33
PKD2-204ENST00000506727 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
PKD2-204ENST00000506727 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
PKD2-204ENST00000506727 CD2APQ9Y5K6 639 aa12.98□□□□□ -0.33
PKD2-204ENST00000506727 TNRC18O15417 2968 aaPredicted RBP12.97□□□□□ -0.33
PKD2-204ENST00000506727 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
PKD2-204ENST00000506727 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
PKD2-204ENST00000506727 ABHD8Q96I13 439 aa12.96□□□□□ -0.33
PKD2-204ENST00000506727 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
PKD2-204ENST00000506727 C16orf71Q8IYS4 520 aaPredicted RBP12.95□□□□□ -0.34
PKD2-204ENST00000506727 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
PKD2-204ENST00000506727 ANKARQ7Z5J8 1434 aa12.95□□□□□ -0.34
PKD2-204ENST00000506727 KNDC1Q76NI1 1749 aa12.94□□□□□ -0.34
PKD2-204ENST00000506727 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
PKD2-204ENST00000506727 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
PKD2-204ENST00000506727 CRB1P82279 1406 aa12.94□□□□□ -0.34
PKD2-204ENST00000506727 NUP155O75694 1391 aa12.94□□□□□ -0.34
PKD2-204ENST00000506727 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
PKD2-204ENST00000506727 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
PKD2-204ENST00000506727 KIF1BO60333 1816 aa12.92□□□□□ -0.34
PKD2-204ENST00000506727 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
PKD2-204ENST00000506727 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
PKD2-204ENST00000506727 FOXN1O15353 648 aa12.91□□□□□ -0.34
PKD2-204ENST00000506727 AKAP12Q02952 1782 aa12.91□□□□□ -0.34
PKD2-204ENST00000506727 CPDO75976 1380 aa12.91□□□□□ -0.34
PKD2-204ENST00000506727 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
PKD2-204ENST00000506727 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
PKD2-204ENST00000506727 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
PKD2-204ENST00000506727 TMEM132EQ6IEE7 984 aa12.88□□□□□ -0.35
PKD2-204ENST00000506727 SMC1BQ8NDV3 1235 aa12.88□□□□□ -0.35
PKD2-204ENST00000506727 CDCA7Q9BWT1 371 aaPredicted RBP12.88□□□□□ -0.35
PKD2-204ENST00000506727 TFCP2L1Q9NZI6 479 aa12.88□□□□□ -0.35
PKD2-204ENST00000506727 NHSQ6T4R5 1651 aa12.88□□□□□ -0.35
PKD2-204ENST00000506727 PPLO60437 1756 aa12.87□□□□□ -0.35
PKD2-204ENST00000506727 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
PKD2-204ENST00000506727 VPS8Q8N3P4 1428 aa12.87□□□□□ -0.35
PKD2-204ENST00000506727 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
PKD2-204ENST00000506727 TUBGCP6Q96RT7 1819 aa12.86□□□□□ -0.35
PKD2-204ENST00000506727 CTCFP49711 727 aaPredicted RBP12.86□□□□□ -0.35
PKD2-204ENST00000506727 YTHDC2Q9H6S0 1430 aaKnown RBP12.86□□□□□ -0.35
PKD2-204ENST00000506727 IGSF1Q8N6C5 1336 aa12.86□□□□□ -0.35
PKD2-204ENST00000506727 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
PKD2-204ENST00000506727 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
PKD2-204ENST00000506727 NGDNQ8NEJ9 315 aaKnown RBP12.84□□□□□ -0.35
PKD2-204ENST00000506727 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
PKD2-204ENST00000506727 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
PKD2-204ENST00000506727 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.35
PKD2-204ENST00000506727 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.36
PKD2-204ENST00000506727 ADGRF5Q8IZF2 1346 aa12.83□□□□□ -0.36
PKD2-204ENST00000506727 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
PKD2-204ENST00000506727 BTAF1O14981 1849 aa12.81□□□□□ -0.36
PKD2-204ENST00000506727 USP6P35125 1406 aa12.81□□□□□ -0.36
PKD2-204ENST00000506727 EXOC5O00471 708 aa12.81□□□□□ -0.36
PKD2-204ENST00000506727 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
PKD2-204ENST00000506727 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
PKD2-204ENST00000506727 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
PKD2-204ENST00000506727 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
PKD2-204ENST00000506727 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
PKD2-204ENST00000506727 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
PKD2-204ENST00000506727 LBX1P52954 281 aa12.79□□□□□ -0.36
PKD2-204ENST00000506727 TRPM1Q7Z4N2 1603 aa12.79□□□□□ -0.36
PKD2-204ENST00000506727 PLEKHG2Q9H7P9 1386 aa12.79□□□□□ -0.36
PKD2-204ENST00000506727 SAFB2Q14151 953 aaKnown RBP eCLIP12.78□□□□□ -0.36
PKD2-204ENST00000506727 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
PKD2-204ENST00000506727 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
PKD2-204ENST00000506727 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
PKD2-204ENST00000506727 GCP02774 474 aa12.77□□□□□ -0.37
PKD2-204ENST00000506727 EIF3AQ14152 1382 aaKnown RBP12.77□□□□□ -0.37
PKD2-204ENST00000506727 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms