RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CRB1P82279 1406 aa21.72■■□□□ 1.07
CLDND1-211ENST00000506575 BARGINQ6ZT62 677 aa21.71■■□□□ 1.07
CLDND1-211ENST00000506575 RGPD5Q99666 1765 aa21.7■■□□□ 1.06
CLDND1-211ENST00000506575 EIF4G2P78344 907 aaKnown RBP eCLIP21.7■■□□□ 1.06
CLDND1-211ENST00000506575 THRAP3Q9Y2W1 955 aaKnown RBP21.7■■□□□ 1.06
CLDND1-211ENST00000506575 SF3B2Q13435 895 aaKnown RBP21.69■■□□□ 1.06
CLDND1-211ENST00000506575 TOM1L2Q6ZVM7 507 aa21.69■■□□□ 1.06
CLDND1-211ENST00000506575 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
CLDND1-211ENST00000506575 BLMP54132 1417 aaPredicted RBP21.69■■□□□ 1.06
CLDND1-211ENST00000506575 LTN1O94822 1766 aa21.69■■□□□ 1.06
CLDND1-211ENST00000506575 OVOS2A0A0J9YW53 1432 aa21.68■■□□□ 1.06
CLDND1-211ENST00000506575 OVOS2Q6IE36 1432 aa21.68■■□□□ 1.06
CLDND1-211ENST00000506575 ABCC6O95255 1503 aa21.68■■□□□ 1.06
CLDND1-211ENST00000506575 WDR17Q8IZU2 1322 aa21.67■■□□□ 1.06
CLDND1-211ENST00000506575 CSB-PGBD3P0DP91 1061 aa21.67■■□□□ 1.06
CLDND1-211ENST00000506575 COG3Q96JB2 828 aa21.67■■□□□ 1.06
CLDND1-211ENST00000506575 HSPA5P11021 654 aaKnown RBP21.65■■□□□ 1.06
CLDND1-211ENST00000506575 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
CLDND1-211ENST00000506575 MYOM1P52179 1685 aa21.65■■□□□ 1.06
CLDND1-211ENST00000506575 FAM182BQ5T319 152 aa21.64■■□□□ 1.05
CLDND1-211ENST00000506575 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
CLDND1-211ENST00000506575 PARP4Q9UKK3 1724 aaKnown RBP21.63■■□□□ 1.05
CLDND1-211ENST00000506575 KIF20BQ96Q89 1820 aa21.61■■□□□ 1.05
CLDND1-211ENST00000506575 RGPD1P0DJD0 1748 aa21.6■■□□□ 1.05
CLDND1-211ENST00000506575 WNK3Q9BYP7 1800 aa21.6■■□□□ 1.05
CLDND1-211ENST00000506575 FAM196AQ6ZSG2 479 aa21.6■■□□□ 1.05
CLDND1-211ENST00000506575 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
CLDND1-211ENST00000506575 FYB1O15117 783 aa21.59■■□□□ 1.05
CLDND1-211ENST00000506575 GGNBP2Q9H3C7 697 aa21.59■■□□□ 1.05
CLDND1-211ENST00000506575 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.05
CLDND1-211ENST00000506575 ERBB3P21860 1342 aa21.57■■□□□ 1.04
CLDND1-211ENST00000506575 BAG6P46379 1132 aa21.57■■□□□ 1.04
CLDND1-211ENST00000506575 DEFB132Q7Z7B7 95 aa21.57■■□□□ 1.04
CLDND1-211ENST00000506575 CCDC7Q96M83 1385 aa21.57■■□□□ 1.04
CLDND1-211ENST00000506575 NSD3Q9BZ95 1437 aa21.56■■□□□ 1.04
CLDND1-211ENST00000506575 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
CLDND1-211ENST00000506575 DDB1Q16531 1140 aa21.56■■□□□ 1.04
CLDND1-211ENST00000506575 ANKRD24Q8TF21 1146 aa21.56■■□□□ 1.04
CLDND1-211ENST00000506575 NLRP2Q9NX02 1062 aa21.56■■□□□ 1.04
CLDND1-211ENST00000506575 AMPHP49418 695 aa21.55■■□□□ 1.04
CLDND1-211ENST00000506575 IP6K1Q92551 441 aa21.55■■□□□ 1.04
CLDND1-211ENST00000506575 CARD14Q9BXL6 1004 aa21.55■■□□□ 1.04
CLDND1-211ENST00000506575 MAP3K19Q56UN5 1328 aa21.55■■□□□ 1.04
CLDND1-211ENST00000506575 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
CLDND1-211ENST00000506575 TRIM37O94972 964 aa21.53■■□□□ 1.04
CLDND1-211ENST00000506575 TNS1Q9HBL0 1735 aaKnown RBP21.52■■□□□ 1.04
CLDND1-211ENST00000506575 FBLN1P23142 703 aa21.52■■□□□ 1.04
CLDND1-211ENST00000506575 FAM208AQ9UK61 1670 aaKnown RBP21.51■■□□□ 1.03
CLDND1-211ENST00000506575 HOXC9P31274 260 aa21.51■■□□□ 1.03
CLDND1-211ENST00000506575 LTV1Q96GA3 475 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-211ENST00000506575 OVOS2A0A0G2JMS6 1433 aa21.51■■□□□ 1.03
CLDND1-211ENST00000506575 CGNL1Q0VF96 1302 aa21.51■■□□□ 1.03
CLDND1-211ENST00000506575 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
CLDND1-211ENST00000506575 DISP2A7MBM2 1401 aa21.5■■□□□ 1.03
CLDND1-211ENST00000506575 EXOC5O00471 708 aa21.5■■□□□ 1.03
CLDND1-211ENST00000506575 RRS1Q15050 365 aaKnown RBP21.5■■□□□ 1.03
CLDND1-211ENST00000506575 EN1Q05925 392 aaPredicted RBP21.48■■□□□ 1.03
CLDND1-211ENST00000506575 PEAK1Q9H792 1746 aa21.47■■□□□ 1.03
CLDND1-211ENST00000506575 APBA3O96018 575 aa21.47■■□□□ 1.03
CLDND1-211ENST00000506575 IL2RBP14784 551 aa21.47■■□□□ 1.03
CLDND1-211ENST00000506575 TNS2Q63HR2 1409 aa21.46■■□□□ 1.03
CLDND1-211ENST00000506575 MARCH10Q8NA82 808 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-211ENST00000506575 PANK3Q9H999 370 aa21.45■■□□□ 1.02
CLDND1-211ENST00000506575 SMG6Q86US8 1419 aaKnown RBP21.45■■□□□ 1.02
CLDND1-211ENST00000506575 SBF2Q86WG5 1849 aa21.44■■□□□ 1.02
CLDND1-211ENST00000506575 FLT4P35916 1363 aa21.43■■□□□ 1.02
CLDND1-211ENST00000506575 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
CLDND1-211ENST00000506575 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
CLDND1-211ENST00000506575 RGPD2P0DJD1 1756 aa21.43■■□□□ 1.02
CLDND1-211ENST00000506575 EZH2Q15910 746 aaKnown RBP21.41■■□□□ 1.02
CLDND1-211ENST00000506575 MAP2P11137 1827 aaKnown RBP21.41■■□□□ 1.02
CLDND1-211ENST00000506575 INSRP06213 1382 aa21.4■■□□□ 1.02
CLDND1-211ENST00000506575 PARD3Q8TEW0 1356 aa21.4■■□□□ 1.02
CLDND1-211ENST00000506575 CAMKK2Q96RR4 588 aa21.4■■□□□ 1.02
CLDND1-211ENST00000506575 BCL9O00512 1426 aa21.39■■□□□ 1.02
CLDND1-211ENST00000506575 PPM1GO15355 546 aaPredicted RBP21.39■■□□□ 1.01
CLDND1-211ENST00000506575 HSP90AB2PQ58FF8 381 aa21.39■■□□□ 1.01
CLDND1-211ENST00000506575 EMILIN1Q9Y6C2 1016 aa21.39■■□□□ 1.01
CLDND1-211ENST00000506575 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
CLDND1-211ENST00000506575 BCL11BQ9C0K0 894 aaPredicted RBP21.38■■□□□ 1.01
CLDND1-211ENST00000506575 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
CLDND1-211ENST00000506575 NSD2O96028 1365 aa21.36■■□□□ 1.01
CLDND1-211ENST00000506575 TNNT2P45379 298 aaPredicted RBP21.36■■□□□ 1.01
CLDND1-211ENST00000506575 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
CLDND1-211ENST00000506575 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
CLDND1-211ENST00000506575 KAT6BQ8WYB5 2073 aa21.36■■□□□ 1.01
CLDND1-211ENST00000506575 RREB1Q92766 1687 aa21.35■■□□□ 1.01
CLDND1-211ENST00000506575 USHBP1Q8N6Y0 703 aa21.34■■□□□ 1.01
CLDND1-211ENST00000506575 DDX54Q8TDD1 881 aaKnown RBP21.34■■□□□ 1.01
CLDND1-211ENST00000506575 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1.01
CLDND1-211ENST00000506575 RGPD4Q7Z3J3 1758 aa21.33■■□□□ 1.01
CLDND1-211ENST00000506575 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1.01
CLDND1-211ENST00000506575 POLKQ9UBT6 870 aa21.33■■□□□ 1.01
CLDND1-211ENST00000506575 WASHC2AQ641Q2 1341 aa21.32■■□□□ 1
CLDND1-211ENST00000506575 PSDA5PKW4 1024 aaPredicted RBP21.32■■□□□ 1
CLDND1-211ENST00000506575 PTF1AQ7RTS3 328 aa21.32■■□□□ 1
CLDND1-211ENST00000506575 MORC1Q86VD1 984 aa21.32■■□□□ 1
CLDND1-211ENST00000506575 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
CLDND1-211ENST00000506575 NHSQ6T4R5 1651 aa21.31■■□□□ 1
CLDND1-211ENST00000506575 MEGF6O75095 1541 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms