RNA–Protein interactions for RNA: ENST00000505885.1

SRPK1-207, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-207ENST00000505885 GPSM3Q9Y4H4 160 aa7.56□□□□□ -1.2
SRPK1-207ENST00000505885 RAB15P59190 212 aa7.55□□□□□ -1.2
SRPK1-207ENST00000505885 CCDC116Q8IYX3 515 aa7.55□□□□□ -1.2
SRPK1-207ENST00000505885 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
SRPK1-207ENST00000505885 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
SRPK1-207ENST00000505885 DZIP3Q86Y13 1208 aaKnown RBP7.54□□□□□ -1.2
SRPK1-207ENST00000505885 ZFP42Q96MM3 310 aa7.54□□□□□ -1.2
SRPK1-207ENST00000505885 PURBQ96QR8 312 aaKnown RBP7.54□□□□□ -1.2
SRPK1-207ENST00000505885 CDV3Q9UKY7 258 aaKnown RBP7.54□□□□□ -1.2
SRPK1-207ENST00000505885 FBXO45P0C2W1 286 aa7.53□□□□□ -1.2
SRPK1-207ENST00000505885 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
SRPK1-207ENST00000505885 PPP1R26Q5T8A7 1209 aaPredicted RBP7.53□□□□□ -1.2
SRPK1-207ENST00000505885 KIFC2Q96AC6 838 aa7.53□□□□□ -1.2
SRPK1-207ENST00000505885 NDUFB9Q9Y6M9 179 aa7.53□□□□□ -1.2
SRPK1-207ENST00000505885 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
SRPK1-207ENST00000505885 SCARF1Q14162 830 aa7.52□□□□□ -1.21
SRPK1-207ENST00000505885 NBPF20Q3BBV1 942 aa7.52□□□□□ -1.21
SRPK1-207ENST00000505885 INTS6LQ5JSJ4 861 aaKnown RBP7.52□□□□□ -1.21
SRPK1-207ENST00000505885 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
SRPK1-207ENST00000505885 PCDHB9Q9Y5E1 797 aa7.51□□□□□ -1.21
SRPK1-207ENST00000505885 APBB1O00213 710 aa7.5□□□□□ -1.21
SRPK1-207ENST00000505885 GPR37L1O60883 481 aa7.5□□□□□ -1.21
SRPK1-207ENST00000505885 CBLBQ13191 982 aa7.5□□□□□ -1.21
SRPK1-207ENST00000505885 LINC00528Q8N1L1 170 aa7.5□□□□□ -1.21
SRPK1-207ENST00000505885 MEIOBQ8N635 442 aa7.5□□□□□ -1.21
SRPK1-207ENST00000505885 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
SRPK1-207ENST00000505885 UPP2O95045 317 aa7.49□□□□□ -1.21
SRPK1-207ENST00000505885 BMP2P12643 396 aa7.49□□□□□ -1.21
SRPK1-207ENST00000505885 DHX9Q08211 1270 aaKnown RBP7.49□□□□□ -1.21
SRPK1-207ENST00000505885 TMPRSS4Q9NRS4 437 aa7.49□□□□□ -1.21
SRPK1-207ENST00000505885 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
SRPK1-207ENST00000505885 SOBPA7XYQ1 873 aa7.48□□□□□ -1.21
SRPK1-207ENST00000505885 SOCS7O14512 581 aa7.48□□□□□ -1.21
SRPK1-207ENST00000505885 ERVH48-1M5A8F1 160 aa7.47□□□□□ -1.21
SRPK1-207ENST00000505885 NR1H3Q13133 447 aa7.47□□□□□ -1.21
SRPK1-207ENST00000505885 ZNF784Q8NCA9 323 aaPredicted RBP7.47□□□□□ -1.21
SRPK1-207ENST00000505885 GIGYF1O75420 1035 aaPredicted RBP7.46□□□□□ -1.22
SRPK1-207ENST00000505885 ESPNB1AK53 854 aa7.45□□□□□ -1.22
SRPK1-207ENST00000505885 AGBL1Q96MI9 1066 aa7.45□□□□□ -1.22
SRPK1-207ENST00000505885 TSEN34Q9BSV6 310 aaKnown RBP7.45□□□□□ -1.22
SRPK1-207ENST00000505885 MAN1A2O60476 641 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 VEGFBP49765 207 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 RELBQ01201 579 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 MCM6Q14566 821 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 Q6ZVU0 165 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 GDPD2Q9HCC8 539 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 PRM3Q9NNZ6 103 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 CYLDQ9NQC7 956 aa7.44□□□□□ -1.22
SRPK1-207ENST00000505885 ZNF330Q9Y3S2 320 aaPredicted RBP7.44□□□□□ -1.22
SRPK1-207ENST00000505885 WFS1O76024 890 aa7.43□□□□□ -1.22
SRPK1-207ENST00000505885 ABL2P42684 1182 aa7.43□□□□□ -1.22
SRPK1-207ENST00000505885 NFX1Q12986 1120 aaKnown RBP7.43□□□□□ -1.22
SRPK1-207ENST00000505885 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
SRPK1-207ENST00000505885 TERTO14746 1132 aaKnown RBP7.42□□□□□ -1.22
SRPK1-207ENST00000505885 IRF5Q13568 498 aa7.42□□□□□ -1.22
SRPK1-207ENST00000505885 SEPT12Q8IYM1 358 aa7.42□□□□□ -1.22
SRPK1-207ENST00000505885 LILRA1O75019 489 aa7.41□□□□□ -1.22
SRPK1-207ENST00000505885 ADD1P35611 737 aaKnown RBP7.41□□□□□ -1.22
SRPK1-207ENST00000505885 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
SRPK1-207ENST00000505885 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
SRPK1-207ENST00000505885 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
SRPK1-207ENST00000505885 DNMT3LQ9UJW3 386 aa7.41□□□□□ -1.22
SRPK1-207ENST00000505885 SOS2Q07890 1332 aaPredicted RBP7.41□□□□□ -1.22
SRPK1-207ENST00000505885 FIGNL2A6NMB9 653 aa7.4□□□□□ -1.22
SRPK1-207ENST00000505885 TTLL8A6PVC2 850 aa7.4□□□□□ -1.22
SRPK1-207ENST00000505885 ADH1AP07327 375 aa7.4□□□□□ -1.22
SRPK1-207ENST00000505885 INSM2Q96T92 566 aaPredicted RBP7.4□□□□□ -1.22
SRPK1-207ENST00000505885 SPINT1O43278 529 aa7.39□□□□□ -1.23
SRPK1-207ENST00000505885 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
SRPK1-207ENST00000505885 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
SRPK1-207ENST00000505885 ZNF592Q92610 1267 aa7.39□□□□□ -1.23
SRPK1-207ENST00000505885 POLMQ9NP87 494 aaPredicted RBP7.39□□□□□ -1.23
SRPK1-207ENST00000505885 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
SRPK1-207ENST00000505885 CTSOP43234 321 aaPredicted RBP7.38□□□□□ -1.23
SRPK1-207ENST00000505885 MCCD1P59942 119 aaPredicted RBP7.38□□□□□ -1.23
SRPK1-207ENST00000505885 RNF20Q5VTR2 975 aa7.38□□□□□ -1.23
SRPK1-207ENST00000505885 SCTRP47872 440 aa7.37□□□□□ -1.23
SRPK1-207ENST00000505885 EIF4G2P78344 907 aaKnown RBP eCLIP7.37□□□□□ -1.23
SRPK1-207ENST00000505885 SLC16A10Q8TF71 515 aa7.37□□□□□ -1.23
SRPK1-207ENST00000505885 COG6Q9Y2V7 657 aa7.37□□□□□ -1.23
SRPK1-207ENST00000505885 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.23
SRPK1-207ENST00000505885 CC2D2BQ6DHV5 1058 aa7.36□□□□□ -1.23
SRPK1-207ENST00000505885 KDF1Q8NAX2 398 aaPredicted RBP7.36□□□□□ -1.23
SRPK1-207ENST00000505885 POM121Q96HA1 1249 aa7.36□□□□□ -1.23
SRPK1-207ENST00000505885 CEP126Q9P2H0 1117 aa7.36□□□□□ -1.23
SRPK1-207ENST00000505885 ATP5J2-PTCD1G3V325 749 aa7.35□□□□□ -1.23
SRPK1-207ENST00000505885 H3BM21 787 aa7.35□□□□□ -1.23
SRPK1-207ENST00000505885 PTGIRP43119 386 aa7.35□□□□□ -1.23
SRPK1-207ENST00000505885 ERVK-9P63128 1117 aa7.35□□□□□ -1.23
SRPK1-207ENST00000505885 TMEM132AQ24JP5 1023 aa7.35□□□□□ -1.23
SRPK1-207ENST00000505885 RNF217Q8TC41 542 aa7.34□□□□□ -1.23
SRPK1-207ENST00000505885 CCDC85AQ96PX6 553 aaPredicted RBP7.34□□□□□ -1.23
SRPK1-207ENST00000505885 CDCA7Q9BWT1 371 aaPredicted RBP7.34□□□□□ -1.23
SRPK1-207ENST00000505885 ERBB4Q15303 1308 aa7.33□□□□□ -1.24
SRPK1-207ENST00000505885 MEN1O00255 615 aa7.33□□□□□ -1.24
SRPK1-207ENST00000505885 UBTFP17480 764 aaKnown RBP7.33□□□□□ -1.24
SRPK1-207ENST00000505885 PTSQ03393 145 aa7.33□□□□□ -1.24
SRPK1-207ENST00000505885 WASHC4Q2M389 1173 aa7.33□□□□□ -1.24
SRPK1-207ENST00000505885 SLFNL1Q499Z3 407 aa7.33□□□□□ -1.24
SRPK1-207ENST00000505885 FOXD4L5Q5VV16 416 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms