RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
TCOF1-207ENST00000504761 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
TCOF1-207ENST00000504761 ADAMTS2O95450 1211 aa17.31■□□□□ 0.36
TCOF1-207ENST00000504761 TRIM27P14373 513 aa17.3■□□□□ 0.36
TCOF1-207ENST00000504761 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
TCOF1-207ENST00000504761 REC8O95072 547 aa17.3■□□□□ 0.36
TCOF1-207ENST00000504761 PHACTR3Q96KR7 559 aa17.3■□□□□ 0.36
TCOF1-207ENST00000504761 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
TCOF1-207ENST00000504761 EIF2AK4Q9P2K8 1649 aaKnown RBP17.3■□□□□ 0.36
TCOF1-207ENST00000504761 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
TCOF1-207ENST00000504761 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
TCOF1-207ENST00000504761 EIF4A2Q14240 407 aaKnown RBP17.29■□□□□ 0.36
TCOF1-207ENST00000504761 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
TCOF1-207ENST00000504761 SIL1Q9H173 461 aa17.29■□□□□ 0.36
TCOF1-207ENST00000504761 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
TCOF1-207ENST00000504761 ABCC1P33527 1531 aa17.29■□□□□ 0.36
TCOF1-207ENST00000504761 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
TCOF1-207ENST00000504761 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
TCOF1-207ENST00000504761 ADGBQ8N7X0 1667 aa17.28■□□□□ 0.36
TCOF1-207ENST00000504761 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
TCOF1-207ENST00000504761 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
TCOF1-207ENST00000504761 ABCC11Q96J66 1382 aa17.27■□□□□ 0.36
TCOF1-207ENST00000504761 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
TCOF1-207ENST00000504761 BACH2Q9BYV9 841 aa17.27■□□□□ 0.35
TCOF1-207ENST00000504761 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
TCOF1-207ENST00000504761 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
TCOF1-207ENST00000504761 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
TCOF1-207ENST00000504761 EXOC6BQ9Y2D4 811 aa17.26■□□□□ 0.35
TCOF1-207ENST00000504761 ANXA1P04083 346 aa17.26■□□□□ 0.35
TCOF1-207ENST00000504761 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
TCOF1-207ENST00000504761 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
TCOF1-207ENST00000504761 PLA2R1Q13018 1463 aa17.26■□□□□ 0.35
TCOF1-207ENST00000504761 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
TCOF1-207ENST00000504761 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
TCOF1-207ENST00000504761 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
TCOF1-207ENST00000504761 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
TCOF1-207ENST00000504761 PREX2Q70Z35 1606 aa17.25■□□□□ 0.35
TCOF1-207ENST00000504761 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
TCOF1-207ENST00000504761 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
TCOF1-207ENST00000504761 CDC45O75419 566 aa17.24■□□□□ 0.35
TCOF1-207ENST00000504761 ORAI2Q96SN7 254 aa17.24■□□□□ 0.35
TCOF1-207ENST00000504761 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-207ENST00000504761 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
TCOF1-207ENST00000504761 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
TCOF1-207ENST00000504761 TMX4Q9H1E5 349 aaPredicted RBP17.23■□□□□ 0.35
TCOF1-207ENST00000504761 RUFY2Q8WXA3 655 aa17.23■□□□□ 0.35
TCOF1-207ENST00000504761 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
TCOF1-207ENST00000504761 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 TSPOAP1O95153 1857 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 G3V3G9 751 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 DCAF8Q5TAQ9 597 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 TTC21AQ8NDW8 1320 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 MAP4K4O95819 1239 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-207ENST00000504761 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 ERC2O15083 957 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 APPP05067 770 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 CDC42BPAQ5VT25 1732 aa17.22■□□□□ 0.35
TCOF1-207ENST00000504761 C8orf58Q8NAV2 365 aa17.21■□□□□ 0.35
TCOF1-207ENST00000504761 TMEM2Q9UHN6 1383 aa17.21■□□□□ 0.35
TCOF1-207ENST00000504761 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
TCOF1-207ENST00000504761 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.34
TCOF1-207ENST00000504761 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
TCOF1-207ENST00000504761 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
TCOF1-207ENST00000504761 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
TCOF1-207ENST00000504761 IGHDP01880 384 aa17.2■□□□□ 0.34
TCOF1-207ENST00000504761 EYA1Q99502 592 aa17.2■□□□□ 0.34
TCOF1-207ENST00000504761 PTPRTO14522 1441 aa17.19■□□□□ 0.34
TCOF1-207ENST00000504761 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
TCOF1-207ENST00000504761 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
TCOF1-207ENST00000504761 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
TCOF1-207ENST00000504761 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
TCOF1-207ENST00000504761 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
TCOF1-207ENST00000504761 GCP02774 474 aa17.18■□□□□ 0.34
TCOF1-207ENST00000504761 KAT6BQ8WYB5 2073 aa17.18■□□□□ 0.34
TCOF1-207ENST00000504761 FLIIQ13045 1269 aa17.18■□□□□ 0.34
TCOF1-207ENST00000504761 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
TCOF1-207ENST00000504761 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
TCOF1-207ENST00000504761 DDX17Q92841 729 aaKnown RBP17.17■□□□□ 0.34
TCOF1-207ENST00000504761 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
TCOF1-207ENST00000504761 MSH6P52701 1360 aa17.17■□□□□ 0.34
TCOF1-207ENST00000504761 WASHC4Q2M389 1173 aa17.16■□□□□ 0.34
TCOF1-207ENST00000504761 METP08581 1390 aa17.16■□□□□ 0.34
TCOF1-207ENST00000504761 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
TCOF1-207ENST00000504761 RLBP1P12271 317 aa17.16■□□□□ 0.34
TCOF1-207ENST00000504761 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
TCOF1-207ENST00000504761 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
TCOF1-207ENST00000504761 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
TCOF1-207ENST00000504761 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
TCOF1-207ENST00000504761 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
TCOF1-207ENST00000504761 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
TCOF1-207ENST00000504761 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
TCOF1-207ENST00000504761 IL16Q14005 1332 aa17.14■□□□□ 0.33
TCOF1-207ENST00000504761 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
TCOF1-207ENST00000504761 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
TCOF1-207ENST00000504761 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
TCOF1-207ENST00000504761 DNTTIP2Q5QJE6 756 aaKnown RBP17.13■□□□□ 0.33
TCOF1-207ENST00000504761 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms