RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 THRAP3Q9Y2W1 955 aaKnown RBP19.24■□□□□ 0.67
HOXC6-203ENST00000504315 OVOS2A0A0J9YW53 1432 aa19.24■□□□□ 0.67
HOXC6-203ENST00000504315 OVOS2Q6IE36 1432 aa19.24■□□□□ 0.67
HOXC6-203ENST00000504315 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
HOXC6-203ENST00000504315 LRRC37A3O60309 1634 aa19.22■□□□□ 0.67
HOXC6-203ENST00000504315 ANKRD36BQ8N2N9 1353 aa19.22■□□□□ 0.67
HOXC6-203ENST00000504315 TMF1P82094 1093 aa19.22■□□□□ 0.67
HOXC6-203ENST00000504315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
HOXC6-203ENST00000504315 SBF2Q86WG5 1849 aa19.22■□□□□ 0.67
HOXC6-203ENST00000504315 KIF20BQ96Q89 1820 aa19.22■□□□□ 0.67
HOXC6-203ENST00000504315 NME9Q86XW9 330 aa19.21■□□□□ 0.67
HOXC6-203ENST00000504315 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
HOXC6-203ENST00000504315 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
HOXC6-203ENST00000504315 PEAK1Q9H792 1746 aa19.2■□□□□ 0.66
HOXC6-203ENST00000504315 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
HOXC6-203ENST00000504315 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
HOXC6-203ENST00000504315 FAM208AQ9UK61 1670 aaKnown RBP19.18■□□□□ 0.66
HOXC6-203ENST00000504315 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
HOXC6-203ENST00000504315 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
HOXC6-203ENST00000504315 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
HOXC6-203ENST00000504315 SOX12O15370 315 aa19.16■□□□□ 0.66
HOXC6-203ENST00000504315 CDCA8Q53HL2 280 aa19.16■□□□□ 0.66
HOXC6-203ENST00000504315 SF3B2Q13435 895 aaKnown RBP19.15■□□□□ 0.66
HOXC6-203ENST00000504315 FAM182BQ5T319 152 aa19.14■□□□□ 0.65
HOXC6-203ENST00000504315 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
HOXC6-203ENST00000504315 DEFB132Q7Z7B7 95 aa19.14■□□□□ 0.65
HOXC6-203ENST00000504315 FAM196AQ6ZSG2 479 aa19.13■□□□□ 0.65
HOXC6-203ENST00000504315 RGPD3A6NKT7 1758 aaPredicted RBP19.12■□□□□ 0.65
HOXC6-203ENST00000504315 RGPD4Q7Z3J3 1758 aa19.12■□□□□ 0.65
HOXC6-203ENST00000504315 RREB1Q92766 1687 aa19.12■□□□□ 0.65
HOXC6-203ENST00000504315 ERBB3P21860 1342 aa19.12■□□□□ 0.65
HOXC6-203ENST00000504315 CARD10Q9BWT7 1032 aa19.12■□□□□ 0.65
HOXC6-203ENST00000504315 RGPD2P0DJD1 1756 aa19.11■□□□□ 0.65
HOXC6-203ENST00000504315 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
HOXC6-203ENST00000504315 PDE3BQ13370 1112 aa19.11■□□□□ 0.65
HOXC6-203ENST00000504315 BAG6P46379 1132 aa19.1■□□□□ 0.65
HOXC6-203ENST00000504315 CDCA7Q9BWT1 371 aaPredicted RBP19.1■□□□□ 0.65
HOXC6-203ENST00000504315 COG3Q96JB2 828 aa19.09■□□□□ 0.65
HOXC6-203ENST00000504315 OVOS2A0A0G2JMS6 1433 aa19.08■□□□□ 0.65
HOXC6-203ENST00000504315 ANKRD26Q9UPS8 1709 aa19.08■□□□□ 0.65
HOXC6-203ENST00000504315 C11orf95C9JLR9 678 aaPredicted RBP19.08■□□□□ 0.64
HOXC6-203ENST00000504315 KAT6BQ8WYB5 2073 aa19.08■□□□□ 0.64
HOXC6-203ENST00000504315 BCL9O00512 1426 aa19.08■□□□□ 0.64
HOXC6-203ENST00000504315 MAP2P11137 1827 aaKnown RBP19.07■□□□□ 0.64
HOXC6-203ENST00000504315 FYB1O15117 783 aa19.07■□□□□ 0.64
HOXC6-203ENST00000504315 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
HOXC6-203ENST00000504315 NUP188Q5SRE5 1749 aa19.07■□□□□ 0.64
HOXC6-203ENST00000504315 DDB1Q16531 1140 aa19.06■□□□□ 0.64
HOXC6-203ENST00000504315 IP6K1Q92551 441 aa19.06■□□□□ 0.64
HOXC6-203ENST00000504315 TRIM37O94972 964 aa19.05■□□□□ 0.64
HOXC6-203ENST00000504315 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
HOXC6-203ENST00000504315 TNS2Q63HR2 1409 aa19.05■□□□□ 0.64
HOXC6-203ENST00000504315 RTL1A6NKG5 1358 aa19.05■□□□□ 0.64
HOXC6-203ENST00000504315 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
HOXC6-203ENST00000504315 MAP3K19Q56UN5 1328 aa19.04■□□□□ 0.64
HOXC6-203ENST00000504315 NSD3Q9BZ95 1437 aa19.03■□□□□ 0.64
HOXC6-203ENST00000504315 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
HOXC6-203ENST00000504315 ANKRD24Q8TF21 1146 aa19.03■□□□□ 0.64
HOXC6-203ENST00000504315 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
HOXC6-203ENST00000504315 SHANK3Q9BYB0 1731 aa19.03■□□□□ 0.64
HOXC6-203ENST00000504315 HSPA5P11021 654 aaKnown RBP19.02■□□□□ 0.64
HOXC6-203ENST00000504315 CAMKK2Q96RR4 588 aa19.02■□□□□ 0.64
HOXC6-203ENST00000504315 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
HOXC6-203ENST00000504315 HOXC9P31274 260 aa19.01■□□□□ 0.63
HOXC6-203ENST00000504315 GGNBP2Q9H3C7 697 aa19.01■□□□□ 0.63
HOXC6-203ENST00000504315 FBLN1P23142 703 aa19■□□□□ 0.63
HOXC6-203ENST00000504315 MARCH10Q8NA82 808 aaPredicted RBP19■□□□□ 0.63
HOXC6-203ENST00000504315 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
HOXC6-203ENST00000504315 LRP5O75197 1615 aa19■□□□□ 0.63
HOXC6-203ENST00000504315 KIF24Q5T7B8 1368 aa18.99■□□□□ 0.63
HOXC6-203ENST00000504315 APBA3O96018 575 aa18.98■□□□□ 0.63
HOXC6-203ENST00000504315 IL2RBP14784 551 aa18.98■□□□□ 0.63
HOXC6-203ENST00000504315 EZH2Q15910 746 aaKnown RBP18.98■□□□□ 0.63
HOXC6-203ENST00000504315 EXOC5O00471 708 aa18.97■□□□□ 0.63
HOXC6-203ENST00000504315 AMPHP49418 695 aa18.97■□□□□ 0.63
HOXC6-203ENST00000504315 SRCAPQ6ZRS2 3230 aa18.96■□□□□ 0.63
HOXC6-203ENST00000504315 BTAF1O14981 1849 aa18.96■□□□□ 0.63
HOXC6-203ENST00000504315 RRS1Q15050 365 aaKnown RBP18.96■□□□□ 0.63
HOXC6-203ENST00000504315 CGNL1Q0VF96 1302 aa18.95■□□□□ 0.62
HOXC6-203ENST00000504315 FLT4P35916 1363 aa18.94■□□□□ 0.62
HOXC6-203ENST00000504315 BCL11BQ9C0K0 894 aaPredicted RBP18.94■□□□□ 0.62
HOXC6-203ENST00000504315 INSRP06213 1382 aa18.93■□□□□ 0.62
HOXC6-203ENST00000504315 PLSCR1O15162 318 aa18.93■□□□□ 0.62
HOXC6-203ENST00000504315 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
HOXC6-203ENST00000504315 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
HOXC6-203ENST00000504315 MEGF6O75095 1541 aa18.91■□□□□ 0.62
HOXC6-203ENST00000504315 PTF1AQ7RTS3 328 aa18.91■□□□□ 0.62
HOXC6-203ENST00000504315 DOT1LQ8TEK3 1739 aa18.91■□□□□ 0.62
HOXC6-203ENST00000504315 PKD1L3Q7Z443 1732 aa18.9■□□□□ 0.62
HOXC6-203ENST00000504315 NCAPD2Q15021 1401 aa18.9■□□□□ 0.62
HOXC6-203ENST00000504315 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.61
HOXC6-203ENST00000504315 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
HOXC6-203ENST00000504315 PSDA5PKW4 1024 aaPredicted RBP18.88■□□□□ 0.61
HOXC6-203ENST00000504315 PANK3Q9H999 370 aa18.88■□□□□ 0.61
HOXC6-203ENST00000504315 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
HOXC6-203ENST00000504315 NSD2O96028 1365 aa18.88■□□□□ 0.61
HOXC6-203ENST00000504315 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
HOXC6-203ENST00000504315 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
HOXC6-203ENST00000504315 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
HOXC6-203ENST00000504315 LY75O60449 1722 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms