RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FCHSD2O94868 740 aa19.73■□□□□ 0.75
PCDHA1-203ENST00000504120 TTC39AQ5SRH9 613 aa19.73■□□□□ 0.75
PCDHA1-203ENST00000504120 CHD1LQ86WJ1 897 aa19.73■□□□□ 0.75
PCDHA1-203ENST00000504120 AEBP1Q8IUX7 1158 aa19.73■□□□□ 0.75
PCDHA1-203ENST00000504120 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.73■□□□□ 0.75
PCDHA1-203ENST00000504120 ZNF530Q6P9A1 599 aaPredicted RBP19.72■□□□□ 0.75
PCDHA1-203ENST00000504120 RBM42Q9BTD8 480 aaKnown RBP19.72■□□□□ 0.75
PCDHA1-203ENST00000504120 PDILTQ8N807 584 aa19.72■□□□□ 0.75
PCDHA1-203ENST00000504120 ANO8Q9HCE9 1232 aaPredicted RBP19.72■□□□□ 0.75
PCDHA1-203ENST00000504120 RUFY1Q96T51 708 aa19.72■□□□□ 0.75
PCDHA1-203ENST00000504120 VSIG10Q8N0Z9 540 aa19.72■□□□□ 0.75
PCDHA1-203ENST00000504120 K7ELQ4 463 aaPredicted RBP19.71■□□□□ 0.75
PCDHA1-203ENST00000504120 CDR1P51861 262 aa19.71■□□□□ 0.75
PCDHA1-203ENST00000504120 AK7Q96M32 723 aa19.71■□□□□ 0.75
PCDHA1-203ENST00000504120 CNNM1Q9NRU3 951 aa19.71■□□□□ 0.75
PCDHA1-203ENST00000504120 SPG7Q9UQ90 795 aa19.71■□□□□ 0.75
PCDHA1-203ENST00000504120 WDR97A6NE52 1622 aa19.71■□□□□ 0.75
PCDHA1-203ENST00000504120 FIBPO43427 364 aa19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 CABP4P57796 275 aa19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 GNL3LQ9NVN8 582 aaKnown RBP19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 EPS15P42566 896 aa19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 OFD1O75665 1012 aa19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 CCDC173Q0VFZ6 552 aa19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 STK38Q15208 465 aa19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 JMYQ8N9B5 988 aa19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 WDR33Q9C0J8 1336 aaKnown RBP19.7■□□□□ 0.74
PCDHA1-203ENST00000504120 R3HCC1Q9Y3T6 440 aaKnown RBP19.69■□□□□ 0.74
PCDHA1-203ENST00000504120 TXLNAP40222 546 aa19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 MTERF4Q7Z6M4 381 aaKnown RBP19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 HSP90B2PQ58FF3 399 aa19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 CCP110O43303 1012 aa19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 RPAP2Q8IXW5 612 aaPredicted RBP19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 RAPGEF3O95398 923 aa19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 FILIP1LQ4L180 1135 aa19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
PCDHA1-203ENST00000504120 SLFN5Q08AF3 891 aa19.67■□□□□ 0.74
PCDHA1-203ENST00000504120 CT47A1Q5JQC4 288 aaPredicted RBP19.67■□□□□ 0.74
PCDHA1-203ENST00000504120 PIP4K2AP48426 406 aaPredicted RBP19.67■□□□□ 0.74
PCDHA1-203ENST00000504120 SMC2O95347 1197 aa19.67■□□□□ 0.74
PCDHA1-203ENST00000504120 NFE2L2Q16236 605 aa19.67■□□□□ 0.74
PCDHA1-203ENST00000504120 ATP2B1P20020 1258 aa19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 SAMD1Q6SPF0 538 aaPredicted RBP19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 NACAP1Q9BZK3 213 aa19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 MTMR7Q9Y216 660 aa19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 DHX8Q14562 1220 aaKnown RBP19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 RRP12Q5JTH9 1297 aaKnown RBP19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
PCDHA1-203ENST00000504120 SMARCE1Q969G3 411 aa19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 MAP7D2Q96T17 732 aa19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 KDM4AO75164 1064 aa19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 CIZ1Q9ULV3 898 aaPredicted RBP19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 ZSCAN25Q6NSZ9 544 aa19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 IKQ13123 557 aaPredicted RBP19.65■□□□□ 0.74
PCDHA1-203ENST00000504120 CCDC192P0DO97 292 aa19.64■□□□□ 0.74
PCDHA1-203ENST00000504120 SIL1Q9H173 461 aa19.64■□□□□ 0.74
PCDHA1-203ENST00000504120 TMPOP42166 694 aaKnown RBP19.64■□□□□ 0.73
PCDHA1-203ENST00000504120 SRGAP3O43295 1099 aa19.64■□□□□ 0.73
PCDHA1-203ENST00000504120 KRT85P78386 507 aa19.64■□□□□ 0.73
PCDHA1-203ENST00000504120 TRIM22Q8IYM9 498 aa19.64■□□□□ 0.73
PCDHA1-203ENST00000504120 CDK5RAP3Q96JB5 506 aa19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 ADGRL1O94910 1474 aa19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 RRS1Q15050 365 aaKnown RBP19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 TOM1L2Q6ZVM7 507 aa19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 MAGEC2Q9UBF1 373 aaPredicted RBP19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 ERCC4Q92889 916 aaPredicted RBP19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 ZSCAN31Q96LW9 406 aaPredicted RBP19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
PCDHA1-203ENST00000504120 ODF2Q5BJF6 829 aa19.62■□□□□ 0.73
PCDHA1-203ENST00000504120 CAGE1Q8TC20 777 aa19.62■□□□□ 0.73
PCDHA1-203ENST00000504120 HMGN5P82970 282 aaKnown RBP19.62■□□□□ 0.73
PCDHA1-203ENST00000504120 CCDC57Q2TAC2 916 aa19.62■□□□□ 0.73
PCDHA1-203ENST00000504120 AACSQ86V21 672 aa19.62■□□□□ 0.73
PCDHA1-203ENST00000504120 POGZQ7Z3K3 1410 aa19.62■□□□□ 0.73
PCDHA1-203ENST00000504120 CEBPZQ03701 1054 aaKnown RBP19.61■□□□□ 0.73
PCDHA1-203ENST00000504120 BLOC1S2Q6QNY1 142 aa19.61■□□□□ 0.73
PCDHA1-203ENST00000504120 CCDC61Q9Y6R9 512 aa19.61■□□□□ 0.73
PCDHA1-203ENST00000504120 BTBD11A6QL63 1104 aa19.61■□□□□ 0.73
PCDHA1-203ENST00000504120 LARP1BQ659C4 914 aaKnown RBP19.61■□□□□ 0.73
PCDHA1-203ENST00000504120 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
PCDHA1-203ENST00000504120 PDIA4P13667 645 aaKnown RBP19.61■□□□□ 0.73
PCDHA1-203ENST00000504120 MYL6BP14649 208 aa19.6■□□□□ 0.73
PCDHA1-203ENST00000504120 STK3Q13188 491 aa19.6■□□□□ 0.73
PCDHA1-203ENST00000504120 TNMDQ9H2S6 317 aa19.6■□□□□ 0.73
PCDHA1-203ENST00000504120 KRT32Q14532 448 aa19.6■□□□□ 0.73
PCDHA1-203ENST00000504120 DACH1Q9UI36 760 aa19.6■□□□□ 0.73
PCDHA1-203ENST00000504120 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
PCDHA1-203ENST00000504120 MAP4K4O95819 1239 aaPredicted RBP19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 SLC26A8Q96RN1 970 aa19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 ME1P48163 572 aa19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 TMEM57Q8N5G2 664 aa19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 DDX54Q8TDD1 881 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 NUDT16Q96DE0 195 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 PDRG1Q9NUG6 133 aa19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 CCDC69A6NI79 296 aa19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 CCAR1Q8IX12 1150 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-203ENST00000504120 RAPGEF6Q8TEU7 1601 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms