RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 CENPJQ9HC77 1338 aaPredicted RBP16.01■□□□□ 0.15
UBE2D3-211ENST00000502404 NBPF1Q3BBV0 1214 aa16.01■□□□□ 0.15
UBE2D3-211ENST00000502404 NRAPQ86VF7 1730 aa16.01■□□□□ 0.15
UBE2D3-211ENST00000502404 BRD4O60885 1362 aaPredicted RBP16■□□□□ 0.15
UBE2D3-211ENST00000502404 KIAA1210Q9ULL0 1709 aa16■□□□□ 0.15
UBE2D3-211ENST00000502404 ECM2O94769 699 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-211ENST00000502404 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-211ENST00000502404 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
UBE2D3-211ENST00000502404 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
UBE2D3-211ENST00000502404 BARGINQ6ZT62 677 aa15.99■□□□□ 0.15
UBE2D3-211ENST00000502404 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
UBE2D3-211ENST00000502404 USP35Q9P2H5 1018 aa15.98■□□□□ 0.15
UBE2D3-211ENST00000502404 C11orf95C9JLR9 678 aaPredicted RBP15.97■□□□□ 0.15
UBE2D3-211ENST00000502404 THRAP3Q9Y2W1 955 aaKnown RBP15.97■□□□□ 0.15
UBE2D3-211ENST00000502404 CPDO75976 1380 aa15.97■□□□□ 0.15
UBE2D3-211ENST00000502404 PPIP5K1Q6PFW1 1433 aa15.96■□□□□ 0.15
UBE2D3-211ENST00000502404 GCP02774 474 aa15.96■□□□□ 0.15
UBE2D3-211ENST00000502404 TCP11L2Q8N4U5 519 aa15.96■□□□□ 0.15
UBE2D3-211ENST00000502404 CABP2Q9NPB3 220 aa15.96■□□□□ 0.15
UBE2D3-211ENST00000502404 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-211ENST00000502404 TRIM37O94972 964 aa15.95■□□□□ 0.14
UBE2D3-211ENST00000502404 USP19O94966 1318 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 CRYBG1Q9Y4K1 1723 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 APBA3O96018 575 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 NLRP6P59044 892 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 CABP1Q9NZU7 370 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
UBE2D3-211ENST00000502404 THSD7AQ9UPZ6 1657 aa15.93■□□□□ 0.14
UBE2D3-211ENST00000502404 PARD3Q8TEW0 1356 aa15.93■□□□□ 0.14
UBE2D3-211ENST00000502404 LARP1Q6PKG0 1096 aaKnown RBP15.93■□□□□ 0.14
UBE2D3-211ENST00000502404 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
UBE2D3-211ENST00000502404 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
UBE2D3-211ENST00000502404 PHRF1Q9P1Y6 1649 aaKnown RBP15.92■□□□□ 0.14
UBE2D3-211ENST00000502404 TOPAZ1Q8N9V7 1692 aa15.92■□□□□ 0.14
UBE2D3-211ENST00000502404 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
UBE2D3-211ENST00000502404 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
UBE2D3-211ENST00000502404 CAMKK2Q96RR4 588 aa15.91■□□□□ 0.14
UBE2D3-211ENST00000502404 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
UBE2D3-211ENST00000502404 NBPF14Q5TI25 921 aa15.9■□□□□ 0.14
UBE2D3-211ENST00000502404 CAMTA1Q9Y6Y1 1673 aa15.89■□□□□ 0.13
UBE2D3-211ENST00000502404 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
UBE2D3-211ENST00000502404 USP6P35125 1406 aa15.88■□□□□ 0.13
UBE2D3-211ENST00000502404 LRP5O75197 1615 aa15.88■□□□□ 0.13
UBE2D3-211ENST00000502404 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-211ENST00000502404 KCNH5Q8NCM2 988 aa15.88■□□□□ 0.13
UBE2D3-211ENST00000502404 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-211ENST00000502404 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
UBE2D3-211ENST00000502404 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
UBE2D3-211ENST00000502404 ROCK2O75116 1388 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-211ENST00000502404 CRB1P82279 1406 aa15.86■□□□□ 0.13
UBE2D3-211ENST00000502404 TOM1L2Q6ZVM7 507 aa15.86■□□□□ 0.13
UBE2D3-211ENST00000502404 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-211ENST00000502404 RGL2O15211 777 aa15.85■□□□□ 0.13
UBE2D3-211ENST00000502404 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
UBE2D3-211ENST00000502404 TTC21AQ8NDW8 1320 aa15.85■□□□□ 0.13
UBE2D3-211ENST00000502404 COL5A2P05997 1499 aaPredicted RBP15.84■□□□□ 0.13
UBE2D3-211ENST00000502404 QRICH2Q9H0J4 1663 aa15.84■□□□□ 0.13
UBE2D3-211ENST00000502404 DDB1Q16531 1140 aa15.84■□□□□ 0.13
UBE2D3-211ENST00000502404 LMO7Q8WWI1 1683 aa15.83■□□□□ 0.13
UBE2D3-211ENST00000502404 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
UBE2D3-211ENST00000502404 CSB-PGBD3P0DP91 1061 aa15.82■□□□□ 0.12
UBE2D3-211ENST00000502404 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
UBE2D3-211ENST00000502404 TNS1Q9HBL0 1735 aaKnown RBP15.82■□□□□ 0.12
UBE2D3-211ENST00000502404 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
UBE2D3-211ENST00000502404 OVOS2A0A0J9YW53 1432 aa15.81■□□□□ 0.12
UBE2D3-211ENST00000502404 C19orf67A6NJJ6 358 aa15.81■□□□□ 0.12
UBE2D3-211ENST00000502404 OVOS2Q6IE36 1432 aa15.81■□□□□ 0.12
UBE2D3-211ENST00000502404 ARHGEF25Q86VW2 580 aa15.81■□□□□ 0.12
UBE2D3-211ENST00000502404 WDR17Q8IZU2 1322 aa15.81■□□□□ 0.12
UBE2D3-211ENST00000502404 SLIT3O75094 1523 aa15.8■□□□□ 0.12
UBE2D3-211ENST00000502404 PLSCR1O15162 318 aa15.8■□□□□ 0.12
UBE2D3-211ENST00000502404 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
UBE2D3-211ENST00000502404 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-211ENST00000502404 CARD10Q9BWT7 1032 aa15.79■□□□□ 0.12
UBE2D3-211ENST00000502404 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-211ENST00000502404 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
UBE2D3-211ENST00000502404 EXOC5O00471 708 aa15.78■□□□□ 0.12
UBE2D3-211ENST00000502404 SOX12O15370 315 aa15.78■□□□□ 0.12
UBE2D3-211ENST00000502404 AXIN2Q9Y2T1 843 aa15.78■□□□□ 0.12
UBE2D3-211ENST00000502404 CPSF1Q10570 1443 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-211ENST00000502404 PYGBP11216 843 aa15.77■□□□□ 0.12
UBE2D3-211ENST00000502404 HDGFL2Q7Z4V5 671 aaPredicted RBP15.77■□□□□ 0.12
UBE2D3-211ENST00000502404 CARD11Q9BXL7 1154 aa15.77■□□□□ 0.12
UBE2D3-211ENST00000502404 SPON1Q9HCB6 807 aa15.77■□□□□ 0.12
UBE2D3-211ENST00000502404 PARP4Q9UKK3 1724 aaKnown RBP15.77■□□□□ 0.11
UBE2D3-211ENST00000502404 PPP1R1BQ9UD71 204 aaPredicted RBP15.76■□□□□ 0.11
UBE2D3-211ENST00000502404 SBNO2Q9Y2G9 1366 aa15.75■□□□□ 0.11
UBE2D3-211ENST00000502404 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
UBE2D3-211ENST00000502404 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
UBE2D3-211ENST00000502404 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
UBE2D3-211ENST00000502404 KCNQ2O43526 872 aa15.74■□□□□ 0.11
UBE2D3-211ENST00000502404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBE2D3-211ENST00000502404 TERF2IPQ9NYB0 399 aa15.74■□□□□ 0.11
UBE2D3-211ENST00000502404 PIK3C2AO00443 1686 aa15.73■□□□□ 0.11
UBE2D3-211ENST00000502404 MARCH10Q8NA82 808 aaPredicted RBP15.73■□□□□ 0.11
UBE2D3-211ENST00000502404 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
UBE2D3-211ENST00000502404 BCL9O00512 1426 aa15.73■□□□□ 0.11
UBE2D3-211ENST00000502404 USP31Q70CQ4 1352 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms