RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 ITPKCQ96DU7 683 aa10.42□□□□□ -0.74
NFKB1-203ENST00000502367 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
NFKB1-203ENST00000502367 FBXO45P0C2W1 286 aa10.41□□□□□ -0.74
NFKB1-203ENST00000502367 RAB15P59190 212 aa10.41□□□□□ -0.74
NFKB1-203ENST00000502367 TRIM46Q7Z4K8 759 aa10.41□□□□□ -0.74
NFKB1-203ENST00000502367 ZC3H4Q9UPT8 1303 aaKnown RBP10.4□□□□□ -0.74
NFKB1-203ENST00000502367 ZIC2O95409 532 aaPredicted RBP10.4□□□□□ -0.74
NFKB1-203ENST00000502367 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
NFKB1-203ENST00000502367 NR5A1Q13285 461 aa10.39□□□□□ -0.75
NFKB1-203ENST00000502367 KCTD15Q96SI1 283 aaPredicted RBP10.39□□□□□ -0.75
NFKB1-203ENST00000502367 RSF1Q96T23 1441 aaPredicted RBP10.39□□□□□ -0.75
NFKB1-203ENST00000502367 SLC10A4Q96EP9 437 aa10.38□□□□□ -0.75
NFKB1-203ENST00000502367 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
NFKB1-203ENST00000502367 C11orf95C9JLR9 678 aaPredicted RBP10.37□□□□□ -0.75
NFKB1-203ENST00000502367 DZIP3Q86Y13 1208 aaKnown RBP10.37□□□□□ -0.75
NFKB1-203ENST00000502367 MAP4K5Q9Y4K4 846 aa10.37□□□□□ -0.75
NFKB1-203ENST00000502367 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
NFKB1-203ENST00000502367 ZBBXA8MT70 800 aa10.36□□□□□ -0.75
NFKB1-203ENST00000502367 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
NFKB1-203ENST00000502367 GDPD2Q9HCC8 539 aa10.36□□□□□ -0.75
NFKB1-203ENST00000502367 TMPRSS4Q9NRS4 437 aa10.36□□□□□ -0.75
NFKB1-203ENST00000502367 GPSM3Q9Y4H4 160 aa10.36□□□□□ -0.75
NFKB1-203ENST00000502367 NDUFB9Q9Y6M9 179 aa10.36□□□□□ -0.75
NFKB1-203ENST00000502367 CBLBQ13191 982 aa10.35□□□□□ -0.75
NFKB1-203ENST00000502367 PPP1R26Q5T8A7 1209 aaPredicted RBP10.35□□□□□ -0.75
NFKB1-203ENST00000502367 CCDC116Q8IYX3 515 aa10.35□□□□□ -0.75
NFKB1-203ENST00000502367 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
NFKB1-203ENST00000502367 PCDHB9Q9Y5E1 797 aa10.35□□□□□ -0.75
NFKB1-203ENST00000502367 GIGYF1O75420 1035 aaPredicted RBP10.34□□□□□ -0.75
NFKB1-203ENST00000502367 IRF5Q13568 498 aa10.34□□□□□ -0.75
NFKB1-203ENST00000502367 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
NFKB1-203ENST00000502367 PURBQ96QR8 312 aaKnown RBP10.34□□□□□ -0.75
NFKB1-203ENST00000502367 MCM6Q14566 821 aa10.33□□□□□ -0.76
NFKB1-203ENST00000502367 ZNF775Q96BV0 537 aaPredicted RBP10.33□□□□□ -0.76
NFKB1-203ENST00000502367 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
NFKB1-203ENST00000502367 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
NFKB1-203ENST00000502367 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
NFKB1-203ENST00000502367 POM121Q96HA1 1249 aa10.32□□□□□ -0.76
NFKB1-203ENST00000502367 ABL2P42684 1182 aa10.31□□□□□ -0.76
NFKB1-203ENST00000502367 NR1H3Q13133 447 aa10.31□□□□□ -0.76
NFKB1-203ENST00000502367 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
NFKB1-203ENST00000502367 MRPL14Q6P1L8 145 aaKnown RBP10.31□□□□□ -0.76
NFKB1-203ENST00000502367 ERVH48-1M5A8F1 160 aa10.3□□□□□ -0.76
NFKB1-203ENST00000502367 VAC14Q08AM6 782 aa10.29□□□□□ -0.76
NFKB1-203ENST00000502367 TRIM47Q96LD4 638 aa10.29□□□□□ -0.76
NFKB1-203ENST00000502367 AGBL1Q96MI9 1066 aa10.29□□□□□ -0.76
NFKB1-203ENST00000502367 ADD1P35611 737 aaKnown RBP10.28□□□□□ -0.76
NFKB1-203ENST00000502367 EMILIN1Q9Y6C2 1016 aa10.28□□□□□ -0.76
NFKB1-203ENST00000502367 WIZO95785 1651 aa10.28□□□□□ -0.76
NFKB1-203ENST00000502367 ESPNB1AK53 854 aa10.27□□□□□ -0.77
NFKB1-203ENST00000502367 SOCS7O14512 581 aa10.27□□□□□ -0.77
NFKB1-203ENST00000502367 ZNF784Q8NCA9 323 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-203ENST00000502367 NBPF20Q3BBV1 942 aa10.26□□□□□ -0.77
NFKB1-203ENST00000502367 MEIOBQ8N635 442 aa10.26□□□□□ -0.77
NFKB1-203ENST00000502367 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
NFKB1-203ENST00000502367 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
NFKB1-203ENST00000502367 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
NFKB1-203ENST00000502367 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
NFKB1-203ENST00000502367 BAZ1AQ9NRL2 1556 aaPredicted RBP10.25□□□□□ -0.77
NFKB1-203ENST00000502367 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
NFKB1-203ENST00000502367 LILRA1O75019 489 aa10.24□□□□□ -0.77
NFKB1-203ENST00000502367 BMP2P12643 396 aa10.24□□□□□ -0.77
NFKB1-203ENST00000502367 RELBQ01201 579 aa10.24□□□□□ -0.77
NFKB1-203ENST00000502367 LINC00528Q8N1L1 170 aa10.24□□□□□ -0.77
NFKB1-203ENST00000502367 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
NFKB1-203ENST00000502367 PGPEP1Q9NXJ5 209 aa10.23□□□□□ -0.77
NFKB1-203ENST00000502367 APBB1O00213 710 aa10.22□□□□□ -0.77
NFKB1-203ENST00000502367 SCARF1Q14162 830 aa10.22□□□□□ -0.77
NFKB1-203ENST00000502367 Q6ZVU0 165 aa10.22□□□□□ -0.77
NFKB1-203ENST00000502367 ZNF395Q9H8N7 513 aaPredicted RBP10.22□□□□□ -0.77
NFKB1-203ENST00000502367 SCTRP47872 440 aa10.21□□□□□ -0.77
NFKB1-203ENST00000502367 VEGFBP49765 207 aa10.21□□□□□ -0.77
NFKB1-203ENST00000502367 DHX9Q08211 1270 aaKnown RBP10.21□□□□□ -0.77
NFKB1-203ENST00000502367 KDF1Q8NAX2 398 aaPredicted RBP10.21□□□□□ -0.77
NFKB1-203ENST00000502367 CEP126Q9P2H0 1117 aa10.21□□□□□ -0.77
NFKB1-203ENST00000502367 FIGNL2A6NMB9 653 aa10.2□□□□□ -0.78
NFKB1-203ENST00000502367 CDCA7Q9BWT1 371 aaPredicted RBP10.2□□□□□ -0.78
NFKB1-203ENST00000502367 KIFC2Q96AC6 838 aa10.19□□□□□ -0.78
NFKB1-203ENST00000502367 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
NFKB1-203ENST00000502367 CCDC85AQ96PX6 553 aaPredicted RBP10.19□□□□□ -0.78
NFKB1-203ENST00000502367 PRM3Q9NNZ6 103 aa10.19□□□□□ -0.78
NFKB1-203ENST00000502367 INSM2Q96T92 566 aaPredicted RBP10.18□□□□□ -0.78
NFKB1-203ENST00000502367 TSEN34Q9BSV6 310 aaKnown RBP10.18□□□□□ -0.78
NFKB1-203ENST00000502367 PCDHB11Q9Y5F2 797 aa10.18□□□□□ -0.78
NFKB1-203ENST00000502367 EIF4G1Q04637 1599 aaKnown RBP10.18□□□□□ -0.78
NFKB1-203ENST00000502367 UPP2O95045 317 aa10.17□□□□□ -0.78
NFKB1-203ENST00000502367 CTSOP43234 321 aaPredicted RBP10.17□□□□□ -0.78
NFKB1-203ENST00000502367 LCE2CQ5TA81 110 aa10.17□□□□□ -0.78
NFKB1-203ENST00000502367 DNMT3LQ9UJW3 386 aa10.17□□□□□ -0.78
NFKB1-203ENST00000502367 POM121CA8CG34 1229 aa10.16□□□□□ -0.78
NFKB1-203ENST00000502367 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
NFKB1-203ENST00000502367 ZNF330Q9Y3S2 320 aaPredicted RBP10.16□□□□□ -0.78
NFKB1-203ENST00000502367 SOS2Q07890 1332 aaPredicted RBP10.15□□□□□ -0.78
NFKB1-203ENST00000502367 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
NFKB1-203ENST00000502367 TOP2AP11388 1531 aaKnown RBP10.14□□□□□ -0.79
NFKB1-203ENST00000502367 MAN1A2O60476 641 aa10.14□□□□□ -0.79
NFKB1-203ENST00000502367 ADH1AP07327 375 aa10.14□□□□□ -0.79
NFKB1-203ENST00000502367 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
NFKB1-203ENST00000502367 NFX1Q12986 1120 aaKnown RBP10.14□□□□□ -0.79
NFKB1-203ENST00000502367 PHTF2Q8N3S3 785 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms