RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ATG7O95352 703 aa6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 F12P00748 615 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 NYAP1Q6ZVC0 841 aa6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 ZBTB33Q86T24 672 aa6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 RNF135Q8IUD6 432 aa6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 ARHGAP9Q9BRR9 750 aa6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 WBP1LQ9NX94 342 aa6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 RBM19Q9Y4C8 960 aaKnown RBP6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 SMARCA4P51532 1647 aa6.35□□□□□ -1.39
HMGB1P21-201ENST00000502313 USP17L3A6NCW0 530 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 USP17L4A6NCW7 530 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 TMEM88BA6NKF7 163 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 USP17L5A8MUK1 530 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 BRD2P25440 801 aaKnown RBP6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 KCNH2Q12809 1159 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 AGERQ15109 404 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 PDXDC2PQ6P474 469 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 LARP1Q6PKG0 1096 aaKnown RBP6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 USP17L2Q6R6M4 530 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 USP17L1Q7RTZ2 530 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 THAP11Q96EK4 314 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 DRC1Q96MC2 740 aa6.34□□□□□ -1.39
HMGB1P21-201ENST00000502313 BAZ1AQ9NRL2 1556 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P21-201ENST00000502313 DXOO77932 396 aaKnown RBP6.33□□□□□ -1.4
HMGB1P21-201ENST00000502313 ADH1BP00325 375 aa6.33□□□□□ -1.4
HMGB1P21-201ENST00000502313 DZIP3Q86Y13 1208 aaKnown RBP6.33□□□□□ -1.4
HMGB1P21-201ENST00000502313 KCTD12Q96CX2 325 aaKnown RBP6.33□□□□□ -1.4
HMGB1P21-201ENST00000502313 HMGXB3Q12766 1538 aa6.33□□□□□ -1.4
HMGB1P21-201ENST00000502313 MROH2BQ7Z745 1585 aa6.32□□□□□ -1.4
HMGB1P21-201ENST00000502313 THSD4Q6ZMP0 1018 aa6.32□□□□□ -1.4
HMGB1P21-201ENST00000502313 SPATA32Q96LK8 384 aa6.32□□□□□ -1.4
HMGB1P21-201ENST00000502313 CARD14Q9BXL6 1004 aa6.32□□□□□ -1.4
HMGB1P21-201ENST00000502313 EVA1BQ9NVM1 165 aa6.32□□□□□ -1.4
HMGB1P21-201ENST00000502313 GNEQ9Y223 722 aaKnown RBP6.32□□□□□ -1.4
HMGB1P21-201ENST00000502313 MAGEB6P1A0A0J9YX57 407 aa6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 ATP5J2-PTCD1G3V325 749 aa6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 ZNF16P17020 682 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 MMP16P51512 607 aa6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 EML3Q32P44 896 aa6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 PLEKHM2Q8IWE5 1019 aa6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 SLC6A16Q9GZN6 736 aa6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 PRDM9Q9NQV7 894 aa6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 NOVA2Q9UNW9 492 aaKnown RBP6.31□□□□□ -1.4
HMGB1P21-201ENST00000502313 PIK3CDO00329 1044 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 TLL1O43897 1013 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 LZTS3O60299 673 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 ZPR1O75312 459 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 TCF3P15923 654 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 RASA1P20936 1047 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 CANXP27824 592 aaKnown RBP6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 NOM1Q5C9Z4 860 aaKnown RBP6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 DNAJC14Q6Y2X3 702 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 TRIM50Q86XT4 487 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 FAM9AQ8IZU1 332 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 DEPDC4Q8N2C3 294 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 ADAM32Q8TC27 787 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 SLC10A4Q96EP9 437 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 UNC93B1Q9H1C4 597 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 PPP1R1BQ9UD71 204 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 MKRN1Q9UHC7 482 aaKnown RBP6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 SMARCA2P51531 1590 aa6.3□□□□□ -1.4
HMGB1P21-201ENST00000502313 ATP1A2P50993 1020 aa6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 NCOA4Q13772 614 aa6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 MAP7D1Q3KQU3 841 aa6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 BPHLQ86WA6 291 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 FAM160A2Q8N612 972 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 SREK1Q8WXA9 508 aaKnown RBP6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 MTRQ99707 1265 aa6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 IL21Q9HBE4 155 aa6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 DOLKQ9UPQ8 538 aa6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 CADPSQ9ULU8 1353 aa6.29□□□□□ -1.4
HMGB1P21-201ENST00000502313 FAM196BA6NMK8 535 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L15C9J2P7 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L10C9JJH3 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L13C9JLJ4 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L12C9JPN9 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L11C9JVI0 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L21D6R901 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L18D6R9N7 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L22D6RA61 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L17D6RBQ6 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L19D6RCP7 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L20D6RJB6 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 PTPN5P54829 565 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 PSME1Q06323 249 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 USP17L24Q0WX57 530 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 RNF20Q5VTR2 975 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 CCER1Q8TC90 406 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 FAM200AQ8TCP9 573 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 ESF1Q9H501 851 aaKnown RBP6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 NOD1Q9Y239 953 aa6.28□□□□□ -1.4
HMGB1P21-201ENST00000502313 NBPF20Q3BBV1 942 aa6.27□□□□□ -1.41
HMGB1P21-201ENST00000502313 OXLD1Q5BKU9 147 aa6.27□□□□□ -1.41
HMGB1P21-201ENST00000502313 FAM174AQ8TBP5 190 aa6.27□□□□□ -1.41
HMGB1P21-201ENST00000502313 RNF166Q96A37 237 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P21-201ENST00000502313 SIRT1Q96EB6 747 aa6.27□□□□□ -1.41
HMGB1P21-201ENST00000502313 BCL2L13Q9BXK5 485 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms