RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 NEFLP07196 543 aa9.33□□□□□ -0.92
GPATCH4-209ENST00000498641 SULT6B1Q6IMI4 303 aa9.33□□□□□ -0.92
GPATCH4-209ENST00000498641 IP6K1Q92551 441 aa9.33□□□□□ -0.92
GPATCH4-209ENST00000498641 CDCA7LQ96GN5 454 aa9.33□□□□□ -0.92
GPATCH4-209ENST00000498641 ARHGEF10O15013 1369 aa9.33□□□□□ -0.92
GPATCH4-209ENST00000498641 TNS3Q68CZ2 1445 aa9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 ADRA2BP18089 450 aa9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 TMPOP42166 694 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 ZC3H6P61129 1189 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 ARHGEF25Q86VW2 580 aa9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 CABLES1Q8TDN4 633 aa9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 RTL1A6NKG5 1358 aa9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 PXDNQ92626 1479 aa9.32□□□□□ -0.92
GPATCH4-209ENST00000498641 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 LTBP4Q8N2S1 1624 aa9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 RIPK4P57078 832 aa9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 CCDC27Q2M243 656 aa9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 PHACTR3Q96KR7 559 aa9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 EYA1Q99502 592 aa9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 TRPM3Q9HCF6 1732 aaPredicted RBP9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
GPATCH4-209ENST00000498641 E9PSI1 815 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 TOM1O60784 492 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 NFE2L2Q16236 605 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 WDR63Q8IWG1 891 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 SLIT3O75094 1523 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 NFAT5O94916 1531 aa9.3□□□□□ -0.92
GPATCH4-209ENST00000498641 USP54Q70EL1 1684 aa9.29□□□□□ -0.92
GPATCH4-209ENST00000498641 IQSEC2Q5JU85 1478 aa9.29□□□□□ -0.92
GPATCH4-209ENST00000498641 PIP4K2BP78356 416 aa9.29□□□□□ -0.92
GPATCH4-209ENST00000498641 LRRC59Q96AG4 307 aaKnown RBP9.29□□□□□ -0.92
GPATCH4-209ENST00000498641 LMOD3Q0VAK6 560 aa9.28□□□□□ -0.92
GPATCH4-209ENST00000498641 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
GPATCH4-209ENST00000498641 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
GPATCH4-209ENST00000498641 IGSF1Q8N6C5 1336 aa9.28□□□□□ -0.92
GPATCH4-209ENST00000498641 MARF1Q9Y4F3 1742 aaKnown RBP9.28□□□□□ -0.92
GPATCH4-209ENST00000498641 ALS2Q96Q42 1657 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 UBAP1LF5GYI3 381 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 CALD1Q05682 793 aaKnown RBP9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 FKBP8Q14318 412 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 CHRNA2Q15822 529 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 USHBP1Q8N6Y0 703 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 MYH16Q9H6N6 1097 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 RCAN3Q9UKA8 241 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 AXIN2Q9Y2T1 843 aa9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
GPATCH4-209ENST00000498641 NBPF6Q5VWK0 638 aa9.26□□□□□ -0.93
GPATCH4-209ENST00000498641 TRMT2AQ8IZ69 625 aaKnown RBP9.26□□□□□ -0.93
GPATCH4-209ENST00000498641 NBPF4Q96M43 638 aa9.26□□□□□ -0.93
GPATCH4-209ENST00000498641 PRDM11Q9NQV5 511 aa9.26□□□□□ -0.93
GPATCH4-209ENST00000498641 KIAA0232Q92628 1395 aa9.25□□□□□ -0.93
GPATCH4-209ENST00000498641 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
GPATCH4-209ENST00000498641 RTF1Q92541 710 aaKnown RBP9.25□□□□□ -0.93
GPATCH4-209ENST00000498641 NLRP2Q9NX02 1062 aa9.25□□□□□ -0.93
GPATCH4-209ENST00000498641 LAS1LQ9Y4W2 734 aaKnown RBP9.25□□□□□ -0.93
GPATCH4-209ENST00000498641 IL16Q14005 1332 aa9.25□□□□□ -0.93
GPATCH4-209ENST00000498641 CPDO75976 1380 aa9.24□□□□□ -0.93
GPATCH4-209ENST00000498641 KDRP35968 1356 aa9.24□□□□□ -0.93
GPATCH4-209ENST00000498641 IRX6P78412 446 aaPredicted RBP9.24□□□□□ -0.93
GPATCH4-209ENST00000498641 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
GPATCH4-209ENST00000498641 EVA1CP58658 441 aa9.23□□□□□ -0.93
GPATCH4-209ENST00000498641 CERKQ8TCT0 537 aa9.23□□□□□ -0.93
GPATCH4-209ENST00000498641 FBXO41Q8TF61 875 aa9.23□□□□□ -0.93
GPATCH4-209ENST00000498641 THUMPD2Q9BTF0 503 aaKnown RBP9.23□□□□□ -0.93
GPATCH4-209ENST00000498641 ERBB3P21860 1342 aa9.23□□□□□ -0.93
GPATCH4-209ENST00000498641 ROBO1Q9Y6N7 1651 aa9.23□□□□□ -0.93
GPATCH4-209ENST00000498641 LTN1O94822 1766 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 FAM83GA6ND36 823 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 GNAT3A8MTJ3 354 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 GNAI1P63096 354 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 DCTN1Q14203 1278 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 PLEKHO1Q53GL0 409 aaPredicted RBP9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 RAPGEF4Q8WZA2 1011 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 TSR2Q969E8 191 aaKnown RBP9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 NHSL1Q5SYE7 1610 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
GPATCH4-209ENST00000498641 AHDC1Q5TGY3 1603 aaPredicted RBP9.21□□□□□ -0.93
GPATCH4-209ENST00000498641 PHRF1Q9P1Y6 1649 aaKnown RBP9.21□□□□□ -0.93
GPATCH4-209ENST00000498641 HTATSF1O43719 755 aaKnown RBP9.21□□□□□ -0.94
GPATCH4-209ENST00000498641 RRP1P56182 461 aaKnown RBP9.21□□□□□ -0.94
GPATCH4-209ENST00000498641 AMOTQ4VCS5 1084 aa9.21□□□□□ -0.94
GPATCH4-209ENST00000498641 MCM10Q7L590 875 aa9.21□□□□□ -0.94
GPATCH4-209ENST00000498641 IFT57Q9NWB7 429 aa9.21□□□□□ -0.94
GPATCH4-209ENST00000498641 FANCIQ9NVI1 1328 aa9.21□□□□□ -0.94
GPATCH4-209ENST00000498641 TATP17735 454 aaPredicted RBP9.2□□□□□ -0.94
GPATCH4-209ENST00000498641 EXOSC9Q06265 439 aaKnown RBP9.2□□□□□ -0.94
GPATCH4-209ENST00000498641 ZNF530Q6P9A1 599 aaPredicted RBP9.2□□□□□ -0.94
GPATCH4-209ENST00000498641 TOM1L2Q6ZVM7 507 aa9.2□□□□□ -0.94
GPATCH4-209ENST00000498641 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms