RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 B4E1Z4 1266 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 Q3C1V9 767 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 PAXIP1Q6ZW49 1069 aaPredicted RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.99□□□□□ -2.09
XRN1-214ENST00000498077 ARID4BQ4LE39 1312 aaPredicted RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 LACTB2Q53H82 288 aaPredicted RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 NOM1Q5C9Z4 860 aaKnown RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 NBPF11Q86T75 865 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 ZNF777Q9ULD5 760 aaPredicted RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 RBM19Q9Y4C8 960 aaKnown RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 ZNF335Q9H4Z2 1342 aaPredicted RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 POLR1AO95602 1720 aaPredicted RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 DFNA5O60443 496 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 CAVIN2O95810 425 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 ACO1P21399 889 aaKnown RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 KCTD12Q96CX2 325 aaKnown RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 BCL2L12Q9HB09 334 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 CCDC24Q8N4L8 307 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 TRPM4Q8TD43 1214 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 MARVELD3Q96A59 401 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 ZNF318Q5VUA4 2279 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 ABCC5O15440 1437 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 WIZO95785 1651 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 EHBP1L1Q8N3D4 1523 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 PHLPP1O60346 1717 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 RGL2O15211 777 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 DPY19L2Q6NUT2 758 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 MFRPQ9BY79 579 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 RABGEF1Q9UJ41 708 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP1.98□□□□□ -2.09
XRN1-214ENST00000498077 DIXDC1Q155Q3 683 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 ZNF592Q92610 1267 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 GPBP1L1Q9HC44 474 aaPredicted RBP1.98□□□□□ -2.09
XRN1-214ENST00000498077 MAP3K7O43318 606 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 CALCAP01258 141 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 IRX3P78415 501 aaPredicted RBP1.98□□□□□ -2.09
XRN1-214ENST00000498077 E2F4Q16254 413 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 SULF1Q8IWU6 871 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 OXER1Q8TDS5 423 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 AGLP35573 1532 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 KCNQ2O43526 872 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 PRKG1Q13976 671 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 MFSD10Q14728 455 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 CAMTA1Q9Y6Y1 1673 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 ATP10BO94823 1461 aa1.98□□□□□ -2.09
XRN1-214ENST00000498077 HOXB3P14651 431 aaPredicted RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 NBPF8Q3BBV2 869 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 CT47A1Q5JQC4 288 aaPredicted RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 TMUB1Q9BVT8 246 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 DEPDC5O75140 1603 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 CDC14CA4D256 554 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 FAM98CQ17RN3 349 aaKnown RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 MINDY4Q4G0A6 757 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 RBM27Q9P2N5 1060 aaKnown RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 MEGF6O75095 1541 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 REREQ9P2R6 1566 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 ARHGEF1Q92888 912 aaKnown RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 PRG4Q92954 1404 aaPredicted RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 AQRO60306 1485 aaKnown RBP eCLIP1.97□□□□□ -2.097e-9■■■■□ 20.6
XRN1-214ENST00000498077 POTEFA5A3E0 1075 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 TOMM70O94826 608 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 CD2BP2O95400 341 aaKnown RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 NBR1Q14596 966 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 TMEM119Q4V9L6 283 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 LRRC43Q8N309 656 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 ZMAT2Q96NC0 199 aaKnown RBP1.97□□□□□ -2.09
XRN1-214ENST00000498077 PNMA3Q9UL41 463 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 VPS9D1Q9Y2B5 631 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 ATP10DQ9P241 1426 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 PRKCDQ05655 676 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 GPR153Q6NV75 609 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 KCNH6Q9H252 994 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 PPP1R14DQ9NXH3 145 aa1.97□□□□□ -2.09
XRN1-214ENST00000498077 UNC79Q9P2D8 2635 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 TRIM6-TRIM34B2RNG4 842 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 POTEB2H3BUK9 544 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 HSP90AA1P07900 732 aaKnown RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 NBPF6Q5VWK0 638 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 CCER1Q8TC90 406 aaPredicted RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 NBPF4Q96M43 638 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 SRCIN1Q9C0H9 1055 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 BTG4Q9NY30 223 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 TESQ9UGI8 421 aaKnown RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 HPS5Q9UPZ3 1129 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 REXO2Q9Y3B8 237 aaKnown RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 NBPF10Q6P3W6 841 aaKnown RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 TRPC5Q9UL62 973 aaPredicted RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 HCN4Q9Y3Q4 1203 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 ZFYVE16Q7Z3T8 1539 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 CD109Q6YHK3 1445 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 SUPT6HQ7KZ85 1726 aaKnown RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 PRAMEF22A3QJZ6 481 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 WDR43Q15061 677 aaKnown RBP eCLIP1.96□□□□□ -2.1
XRN1-214ENST00000498077 TMEFF1Q8IYR6 380 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 ANO8Q9HCE9 1232 aaPredicted RBP1.96□□□□□ -2.1
XRN1-214ENST00000498077 TULP4Q9NRJ4 1543 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 RTTNQ86VV8 2226 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 ZBED4O75132 1171 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 DGAT1O75907 488 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 PRSS12P56730 875 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms