RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 AXIN2Q9Y2T1 843 aa26.08■■□□□ 1.77
RPN1-208ENST00000497415 RGPD5Q99666 1765 aa26.07■■□□□ 1.76
RPN1-208ENST00000497415 MYOM1P52179 1685 aa26.07■■□□□ 1.76
RPN1-208ENST00000497415 ABCC6O95255 1503 aa26.07■■□□□ 1.76
RPN1-208ENST00000497415 CCDC125Q86Z20 511 aa26.06■■□□□ 1.76
RPN1-208ENST00000497415 THRAP3Q9Y2W1 955 aaKnown RBP26.06■■□□□ 1.76
RPN1-208ENST00000497415 CRB1P82279 1406 aa26.05■■□□□ 1.76
RPN1-208ENST00000497415 EP400Q96L91 3159 aa26.05■■□□□ 1.76
RPN1-208ENST00000497415 HSPA5P11021 654 aaKnown RBP26.05■■□□□ 1.76
RPN1-208ENST00000497415 TCP11L2Q8N4U5 519 aa26.05■■□□□ 1.76
RPN1-208ENST00000497415 USP35Q9P2H5 1018 aa26.05■■□□□ 1.76
RPN1-208ENST00000497415 LTN1O94822 1766 aa26.03■■□□□ 1.76
RPN1-208ENST00000497415 WDR17Q8IZU2 1322 aa26.02■■□□□ 1.76
RPN1-208ENST00000497415 BLMP54132 1417 aaPredicted RBP26■■□□□ 1.75
RPN1-208ENST00000497415 COG3Q96JB2 828 aa25.99■■□□□ 1.75
RPN1-208ENST00000497415 FYB1O15117 783 aa25.98■■□□□ 1.75
RPN1-208ENST00000497415 TOM1L2Q6ZVM7 507 aa25.98■■□□□ 1.75
RPN1-208ENST00000497415 PARP4Q9UKK3 1724 aaKnown RBP25.97■■□□□ 1.75
RPN1-208ENST00000497415 CARD14Q9BXL6 1004 aa25.97■■□□□ 1.75
RPN1-208ENST00000497415 KIF20BQ96Q89 1820 aa25.95■■□□□ 1.75
RPN1-208ENST00000497415 CARD10Q9BWT7 1032 aa25.95■■□□□ 1.74
RPN1-208ENST00000497415 WNK3Q9BYP7 1800 aa25.94■■□□□ 1.74
RPN1-208ENST00000497415 CSB-PGBD3P0DP91 1061 aa25.93■■□□□ 1.74
RPN1-208ENST00000497415 FAM182BQ5T319 152 aa25.93■■□□□ 1.74
RPN1-208ENST00000497415 GGNBP2Q9H3C7 697 aa25.93■■□□□ 1.74
RPN1-208ENST00000497415 ERBB3P21860 1342 aa25.92■■□□□ 1.74
RPN1-208ENST00000497415 NSD3Q9BZ95 1437 aa25.92■■□□□ 1.74
RPN1-208ENST00000497415 PDE3BQ13370 1112 aa25.91■■□□□ 1.74
RPN1-208ENST00000497415 IP6K1Q92551 441 aa25.91■■□□□ 1.74
RPN1-208ENST00000497415 FAM196AQ6ZSG2 479 aa25.9■■□□□ 1.74
RPN1-208ENST00000497415 MAP3K19Q56UN5 1328 aa25.89■■□□□ 1.74
RPN1-208ENST00000497415 FBLN1P23142 703 aa25.89■■□□□ 1.74
RPN1-208ENST00000497415 SF3B2Q13435 895 aaKnown RBP25.89■■□□□ 1.74
RPN1-208ENST00000497415 CDCA7Q9BWT1 371 aaPredicted RBP25.89■■□□□ 1.74
RPN1-208ENST00000497415 CCDC7Q96M83 1385 aa25.89■■□□□ 1.74
RPN1-208ENST00000497415 LRRC37A3O60309 1634 aa25.88■■□□□ 1.73
RPN1-208ENST00000497415 RGPD1P0DJD0 1748 aa25.88■■□□□ 1.73
RPN1-208ENST00000497415 C11orf95C9JLR9 678 aaPredicted RBP25.88■■□□□ 1.73
RPN1-208ENST00000497415 ANKRD24Q8TF21 1146 aa25.88■■□□□ 1.73
RPN1-208ENST00000497415 POLR3GLQ9BT43 218 aa25.88■■□□□ 1.73
RPN1-208ENST00000497415 DISP2A7MBM2 1401 aa25.88■■□□□ 1.73
RPN1-208ENST00000497415 DDB1Q16531 1140 aa25.85■■□□□ 1.73
RPN1-208ENST00000497415 DEFB132Q7Z7B7 95 aa25.85■■□□□ 1.73
RPN1-208ENST00000497415 HOXC9P31274 260 aa25.84■■□□□ 1.73
RPN1-208ENST00000497415 TNS1Q9HBL0 1735 aaKnown RBP25.84■■□□□ 1.73
RPN1-208ENST00000497415 RTL1A6NKG5 1358 aa25.83■■□□□ 1.73
RPN1-208ENST00000497415 AMPHP49418 695 aa25.83■■□□□ 1.73
RPN1-208ENST00000497415 NLRP2Q9NX02 1062 aa25.83■■□□□ 1.73
RPN1-208ENST00000497415 FAM208AQ9UK61 1670 aaKnown RBP25.83■■□□□ 1.73
RPN1-208ENST00000497415 CGNL1Q0VF96 1302 aa25.83■■□□□ 1.73
RPN1-208ENST00000497415 PEAK1Q9H792 1746 aa25.83■■□□□ 1.72
RPN1-208ENST00000497415 RRS1Q15050 365 aaKnown RBP25.82■■□□□ 1.72
RPN1-208ENST00000497415 BAG6P46379 1132 aa25.81■■□□□ 1.72
RPN1-208ENST00000497415 PANK3Q9H999 370 aa25.8■■□□□ 1.72
RPN1-208ENST00000497415 TRIM37O94972 964 aa25.79■■□□□ 1.72
RPN1-208ENST00000497415 OVOS2A0A0G2JMS6 1433 aa25.79■■□□□ 1.72
RPN1-208ENST00000497415 KIF24Q5T7B8 1368 aa25.78■■□□□ 1.72
RPN1-208ENST00000497415 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
RPN1-208ENST00000497415 EXOC5O00471 708 aa25.77■■□□□ 1.72
RPN1-208ENST00000497415 MARCH10Q8NA82 808 aaPredicted RBP25.77■■□□□ 1.72
RPN1-208ENST00000497415 LTV1Q96GA3 475 aaPredicted RBP25.77■■□□□ 1.72
RPN1-208ENST00000497415 IL2RBP14784 551 aa25.76■■□□□ 1.71
RPN1-208ENST00000497415 KIF7Q2M1P5 1343 aa25.76■■□□□ 1.71
RPN1-208ENST00000497415 SBF2Q86WG5 1849 aa25.76■■□□□ 1.71
RPN1-208ENST00000497415 RGPD2P0DJD1 1756 aa25.75■■□□□ 1.71
RPN1-208ENST00000497415 BCL9O00512 1426 aa25.75■■□□□ 1.71
RPN1-208ENST00000497415 TNS2Q63HR2 1409 aa25.75■■□□□ 1.71
RPN1-208ENST00000497415 INSRP06213 1382 aa25.74■■□□□ 1.71
RPN1-208ENST00000497415 EN1Q05925 392 aaPredicted RBP25.74■■□□□ 1.71
RPN1-208ENST00000497415 FLT4P35916 1363 aa25.73■■□□□ 1.71
RPN1-208ENST00000497415 MAP2P11137 1827 aaKnown RBP25.73■■□□□ 1.71
RPN1-208ENST00000497415 HSP90AB2PQ58FF8 381 aa25.71■■□□□ 1.71
RPN1-208ENST00000497415 EMILIN1Q9Y6C2 1016 aa25.71■■□□□ 1.71
RPN1-208ENST00000497415 APBA3O96018 575 aa25.7■■□□□ 1.7
RPN1-208ENST00000497415 CAMKK2Q96RR4 588 aa25.7■■□□□ 1.7
RPN1-208ENST00000497415 NSD2O96028 1365 aa25.69■■□□□ 1.7
RPN1-208ENST00000497415 NBPF6Q5VWK0 638 aa25.68■■□□□ 1.7
RPN1-208ENST00000497415 NBPF4Q96M43 638 aa25.68■■□□□ 1.7
RPN1-208ENST00000497415 SMG6Q86US8 1419 aaKnown RBP25.68■■□□□ 1.7
RPN1-208ENST00000497415 EZH2Q15910 746 aaKnown RBP25.67■■□□□ 1.7
RPN1-208ENST00000497415 POLKQ9UBT6 870 aa25.67■■□□□ 1.7
RPN1-208ENST00000497415 PARD3Q8TEW0 1356 aa25.67■■□□□ 1.7
RPN1-208ENST00000497415 WASHC2AQ641Q2 1341 aa25.65■■□□□ 1.7
RPN1-208ENST00000497415 BCL11BQ9C0K0 894 aaPredicted RBP25.65■■□□□ 1.7
RPN1-208ENST00000497415 KNSTRNQ9Y448 316 aa25.65■■□□□ 1.7
RPN1-208ENST00000497415 RREB1Q92766 1687 aa25.63■■□□□ 1.69
RPN1-208ENST00000497415 PPM1GO15355 546 aaPredicted RBP25.62■■□□□ 1.69
RPN1-208ENST00000497415 PTF1AQ7RTS3 328 aa25.62■■□□□ 1.69
RPN1-208ENST00000497415 RGPD3A6NKT7 1758 aaPredicted RBP25.61■■□□□ 1.69
RPN1-208ENST00000497415 RGPD4Q7Z3J3 1758 aa25.61■■□□□ 1.69
RPN1-208ENST00000497415 MEGF6O75095 1541 aa25.61■■□□□ 1.69
RPN1-208ENST00000497415 PLSCR1O15162 318 aa25.6■■□□□ 1.69
RPN1-208ENST00000497415 PER1O15534 1290 aaPredicted RBP25.6■■□□□ 1.69
RPN1-208ENST00000497415 TNNT2P45379 298 aaPredicted RBP25.6■■□□□ 1.69
RPN1-208ENST00000497415 AMER1Q5JTC6 1135 aaPredicted RBP25.6■■□□□ 1.69
RPN1-208ENST00000497415 USHBP1Q8N6Y0 703 aa25.6■■□□□ 1.69
RPN1-208ENST00000497415 NHSQ6T4R5 1651 aa25.59■■□□□ 1.69
RPN1-208ENST00000497415 NCAPD2Q15021 1401 aa25.59■■□□□ 1.69
RPN1-208ENST00000497415 SHANK3Q9BYB0 1731 aa25.59■■□□□ 1.69
RPN1-208ENST00000497415 MORC1Q86VD1 984 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms