RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 RBM27Q9P2N5 1060 aaKnown RBP15.88■□□□□ 0.13
VEGFA-215ENST00000497139 GABPB1Q06547 395 aaPredicted RBP15.87■□□□□ 0.13
VEGFA-215ENST00000497139 PLCH2O75038 1416 aa15.87■□□□□ 0.13
VEGFA-215ENST00000497139 MORC1Q86VD1 984 aa15.87■□□□□ 0.13
VEGFA-215ENST00000497139 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
VEGFA-215ENST00000497139 NAP1L2Q9ULW6 460 aaPredicted RBP15.87■□□□□ 0.13
VEGFA-215ENST00000497139 ST18O60284 1047 aa15.86■□□□□ 0.13
VEGFA-215ENST00000497139 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
VEGFA-215ENST00000497139 ALDH1L2Q3SY69 923 aa15.86■□□□□ 0.13
VEGFA-215ENST00000497139 CHAF1AQ13111 956 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-215ENST00000497139 SYCP1Q15431 976 aa15.85■□□□□ 0.13
VEGFA-215ENST00000497139 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-215ENST00000497139 ZNF428Q96B54 188 aa15.85■□□□□ 0.13
VEGFA-215ENST00000497139 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
VEGFA-215ENST00000497139 MYOM2P54296 1465 aa15.85■□□□□ 0.13
VEGFA-215ENST00000497139 TPM3P06753 285 aa15.84■□□□□ 0.13
VEGFA-215ENST00000497139 OGFRQ9NZT2 677 aa15.84■□□□□ 0.13
VEGFA-215ENST00000497139 EXOSC9Q06265 439 aaKnown RBP15.84■□□□□ 0.13
VEGFA-215ENST00000497139 PTPRTO14522 1441 aa15.84■□□□□ 0.13
VEGFA-215ENST00000497139 ABCC1P33527 1531 aa15.84■□□□□ 0.13
VEGFA-215ENST00000497139 CTIFO43310 598 aaKnown RBP15.83■□□□□ 0.13
VEGFA-215ENST00000497139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.133e-12■■□□□ 13.2
VEGFA-215ENST00000497139 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.13
VEGFA-215ENST00000497139 INO80Q9ULG1 1556 aaPredicted RBP15.83■□□□□ 0.13
VEGFA-215ENST00000497139 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
VEGFA-215ENST00000497139 PPIP5K1Q6PFW1 1433 aa15.83■□□□□ 0.12
VEGFA-215ENST00000497139 ZDHHC9Q9Y397 364 aa15.83■□□□□ 0.12
VEGFA-215ENST00000497139 ANKRD36BQ8N2N9 1353 aa15.83■□□□□ 0.12
VEGFA-215ENST00000497139 NSD2O96028 1365 aa15.82■□□□□ 0.12
VEGFA-215ENST00000497139 PIK3R4Q99570 1358 aa15.82■□□□□ 0.12
VEGFA-215ENST00000497139 PDIA4P13667 645 aaKnown RBP15.82■□□□□ 0.12
VEGFA-215ENST00000497139 TRAPPC8Q9Y2L5 1435 aa15.82■□□□□ 0.12
VEGFA-215ENST00000497139 ARAP3Q8WWN8 1544 aa15.82■□□□□ 0.12
VEGFA-215ENST00000497139 SLC20A2Q08357 652 aa15.81■□□□□ 0.12
VEGFA-215ENST00000497139 USP26Q9BXU7 913 aa15.81■□□□□ 0.12
VEGFA-215ENST00000497139 ABCA6Q8N139 1617 aa15.81■□□□□ 0.12
VEGFA-215ENST00000497139 MAP3K4Q9Y6R4 1608 aa15.81■□□□□ 0.12
VEGFA-215ENST00000497139 PKP1Q13835 747 aa15.81■□□□□ 0.12
VEGFA-215ENST00000497139 EFCAB2Q5VUJ9 269 aa15.81■□□□□ 0.12
VEGFA-215ENST00000497139 RNF214Q8ND24 703 aa15.81■□□□□ 0.12
VEGFA-215ENST00000497139 FAM193AP78312 1265 aa15.8■□□□□ 0.12
VEGFA-215ENST00000497139 INTS3Q68E01 1043 aaKnown RBP15.8■□□□□ 0.12
VEGFA-215ENST00000497139 CCDC66A2RUB6 948 aa15.79■□□□□ 0.12
VEGFA-215ENST00000497139 VGFO15240 615 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-215ENST00000497139 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
VEGFA-215ENST00000497139 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
VEGFA-215ENST00000497139 MCM2P49736 904 aa15.78■□□□□ 0.12
VEGFA-215ENST00000497139 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-215ENST00000497139 TSC1Q92574 1164 aa15.78■□□□□ 0.12
VEGFA-215ENST00000497139 ARHGAP45Q92619 1136 aa15.78■□□□□ 0.12
VEGFA-215ENST00000497139 MTHFSP49914 203 aa15.78■□□□□ 0.12
VEGFA-215ENST00000497139 BCL11BQ9C0K0 894 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-215ENST00000497139 ZC3H13Q5T200 1668 aaKnown RBP15.77■□□□□ 0.12
VEGFA-215ENST00000497139 BRD1O95696 1058 aa15.77■□□□□ 0.12
VEGFA-215ENST00000497139 CASC1Q6TDU7 716 aa15.77■□□□□ 0.12
VEGFA-215ENST00000497139 NSFL1CQ9UNZ2 370 aaKnown RBP15.77■□□□□ 0.12
VEGFA-215ENST00000497139 PTCH1Q13635 1447 aa15.77■□□□□ 0.12
VEGFA-215ENST00000497139 ZBTB7BO15156 539 aaPredicted RBP15.77■□□□□ 0.11
VEGFA-215ENST00000497139 CDK11BP21127 795 aaKnown RBP15.77■□□□□ 0.11
VEGFA-215ENST00000497139 JARID2Q92833 1246 aaPredicted RBP15.76■□□□□ 0.11
VEGFA-215ENST00000497139 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
VEGFA-215ENST00000497139 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
VEGFA-215ENST00000497139 CREBRFQ8IUR6 639 aa15.76■□□□□ 0.11
VEGFA-215ENST00000497139 ZGPATQ8N5A5 531 aaKnown RBP15.76■□□□□ 0.11
VEGFA-215ENST00000497139 CD109Q6YHK3 1445 aa15.76■□□□□ 0.11
VEGFA-215ENST00000497139 KIAA1524Q8TCG1 905 aa15.75■□□□□ 0.11
VEGFA-215ENST00000497139 CGNQ9P2M7 1197 aaKnown RBP15.75■□□□□ 0.11
VEGFA-215ENST00000497139 GSPT1P15170 499 aaKnown RBP15.75■□□□□ 0.11
VEGFA-215ENST00000497139 U2AF2P26368 475 aaKnown RBP eCLIP15.75■□□□□ 0.112e-48■□□□□ 11.2
VEGFA-215ENST00000497139 TAF7LQ5H9L4 462 aa15.75■□□□□ 0.11
VEGFA-215ENST00000497139 TTC22Q5TAA0 569 aa15.75■□□□□ 0.11
VEGFA-215ENST00000497139 RIOK3O14730 519 aaKnown RBP15.74■□□□□ 0.11
VEGFA-215ENST00000497139 REC8O95072 547 aa15.74■□□□□ 0.11
VEGFA-215ENST00000497139 ADCY5O95622 1261 aa15.74■□□□□ 0.11
VEGFA-215ENST00000497139 U2AF1L5P0DN76 240 aaPredicted RBP15.74■□□□□ 0.11
VEGFA-215ENST00000497139 TMPOP42166 694 aaKnown RBP15.74■□□□□ 0.11
VEGFA-215ENST00000497139 U2AF1Q01081 240 aaKnown RBP eCLIP15.74■□□□□ 0.11
VEGFA-215ENST00000497139 KIF24Q5T7B8 1368 aa15.74■□□□□ 0.11
VEGFA-215ENST00000497139 ATAD2Q6PL18 1390 aa15.74■□□□□ 0.11
VEGFA-215ENST00000497139 INTS4Q96HW7 963 aaKnown RBP15.74■□□□□ 0.11
VEGFA-215ENST00000497139 TET3O43151 1660 aa15.74■□□□□ 0.11
VEGFA-215ENST00000497139 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
VEGFA-215ENST00000497139 IFT172Q9UG01 1749 aa15.73■□□□□ 0.11
VEGFA-215ENST00000497139 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
VEGFA-215ENST00000497139 PLEKHF1Q96S99 279 aa15.73■□□□□ 0.11
VEGFA-215ENST00000497139 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
VEGFA-215ENST00000497139 GOLGA6L6A8MZA4 724 aa15.73■□□□□ 0.11
VEGFA-215ENST00000497139 CCDC183Q5T5S1 534 aa15.73■□□□□ 0.11
VEGFA-215ENST00000497139 TMEM87AQ8NBN3 555 aa15.73■□□□□ 0.11
VEGFA-215ENST00000497139 DNAJC2Q99543 621 aaKnown RBP15.73■□□□□ 0.11
VEGFA-215ENST00000497139 TTC12Q9H892 705 aaPredicted RBP15.73■□□□□ 0.11
VEGFA-215ENST00000497139 USP25Q9UHP3 1055 aa15.72■□□□□ 0.11
VEGFA-215ENST00000497139 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
VEGFA-215ENST00000497139 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
VEGFA-215ENST00000497139 CUL4AQ13619 759 aa15.72■□□□□ 0.11
VEGFA-215ENST00000497139 PUS7Q96PZ0 661 aaKnown RBP15.72■□□□□ 0.11
VEGFA-215ENST00000497139 DDX41Q9UJV9 622 aaKnown RBP15.72■□□□□ 0.11
VEGFA-215ENST00000497139 MORC2Q9Y6X9 1032 aaPredicted RBP15.72■□□□□ 0.11
VEGFA-215ENST00000497139 DEPDC5O75140 1603 aa15.71■□□□□ 0.11
VEGFA-215ENST00000497139 KDM4AO75164 1064 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms