RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 WIPF1O43516 503 aa9.5□□□□□ -0.89
SOX2-OT-216ENST00000497122 BMP2P12643 396 aa9.5□□□□□ -0.89
SOX2-OT-216ENST00000497122 GRM5P41594 1212 aa9.5□□□□□ -0.89
SOX2-OT-216ENST00000497122 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-216ENST00000497122 KLF16Q9BXK1 252 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-216ENST00000497122 MAN1A2O60476 641 aa9.49□□□□□ -0.89
SOX2-OT-216ENST00000497122 SKIV2LQ15477 1246 aaKnown RBP9.49□□□□□ -0.89
SOX2-OT-216ENST00000497122 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
SOX2-OT-216ENST00000497122 CCDC82Q8N4S0 544 aa9.49□□□□□ -0.89
SOX2-OT-216ENST00000497122 IRF7Q92985 503 aa9.49□□□□□ -0.89
SOX2-OT-216ENST00000497122 AP1G2O75843 785 aa9.48□□□□□ -0.89
SOX2-OT-216ENST00000497122 SH3D19Q5HYK7 790 aa9.48□□□□□ -0.89
SOX2-OT-216ENST00000497122 SH3RF1Q7Z6J0 888 aa9.48□□□□□ -0.89
SOX2-OT-216ENST00000497122 CLUAP1Q96AJ1 413 aa9.48□□□□□ -0.89
SOX2-OT-216ENST00000497122 ARHGAP9Q9BRR9 750 aa9.48□□□□□ -0.89
SOX2-OT-216ENST00000497122 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.89
SOX2-OT-216ENST00000497122 C1QTNF2Q9BXJ5 285 aa9.47□□□□□ -0.89
SOX2-OT-216ENST00000497122 STK17AQ9UEE5 414 aa9.47□□□□□ -0.89
SOX2-OT-216ENST00000497122 GMPRP36959 345 aa9.46□□□□□ -0.9
SOX2-OT-216ENST00000497122 NR6A1Q15406 480 aa9.46□□□□□ -0.9
SOX2-OT-216ENST00000497122 CCDC116Q8IYX3 515 aa9.46□□□□□ -0.9
SOX2-OT-216ENST00000497122 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
SOX2-OT-216ENST00000497122 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
SOX2-OT-216ENST00000497122 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
SOX2-OT-216ENST00000497122 H3BM21 787 aa9.45□□□□□ -0.9
SOX2-OT-216ENST00000497122 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
SOX2-OT-216ENST00000497122 ZBTB33Q86T24 672 aa9.45□□□□□ -0.9
SOX2-OT-216ENST00000497122 TRMT44Q8IYL2 757 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-216ENST00000497122 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-216ENST00000497122 MAP4K5Q9Y4K4 846 aa9.45□□□□□ -0.9
SOX2-OT-216ENST00000497122 FBXO31Q5XUX0 539 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-216ENST00000497122 NPAS3Q8IXF0 933 aa9.44□□□□□ -0.9
SOX2-OT-216ENST00000497122 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
SOX2-OT-216ENST00000497122 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-216ENST00000497122 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
SOX2-OT-216ENST00000497122 ERBB4Q15303 1308 aa9.42□□□□□ -0.9
SOX2-OT-216ENST00000497122 TRAK2O60296 914 aa9.42□□□□□ -0.9
SOX2-OT-216ENST00000497122 PDXDC2PQ6P474 469 aa9.42□□□□□ -0.9
SOX2-OT-216ENST00000497122 RAB15P59190 212 aa9.41□□□□□ -0.9
SOX2-OT-216ENST00000497122 PTK2Q05397 1052 aa9.41□□□□□ -0.9
SOX2-OT-216ENST00000497122 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-216ENST00000497122 KCTD15Q96SI1 283 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-216ENST00000497122 TSEN34Q9BSV6 310 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-216ENST00000497122 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.41□□□□□ -0.9
SOX2-OT-216ENST00000497122 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
SOX2-OT-216ENST00000497122 PNMA1Q8ND90 353 aa9.4□□□□□ -0.9
SOX2-OT-216ENST00000497122 A6NJR5 290 aa9.39□□□□□ -0.91
SOX2-OT-216ENST00000497122 CBLBQ13191 982 aa9.39□□□□□ -0.91
SOX2-OT-216ENST00000497122 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
SOX2-OT-216ENST00000497122 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
SOX2-OT-216ENST00000497122 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
SOX2-OT-216ENST00000497122 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
SOX2-OT-216ENST00000497122 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-216ENST00000497122 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-216ENST00000497122 FAM181BA6NEQ2 426 aa9.37□□□□□ -0.91
SOX2-OT-216ENST00000497122 ZSCAN1Q8NBB4 408 aa9.37□□□□□ -0.91
SOX2-OT-216ENST00000497122 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
SOX2-OT-216ENST00000497122 DNMT3LQ9UJW3 386 aa9.37□□□□□ -0.91
SOX2-OT-216ENST00000497122 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-216ENST00000497122 SOS2Q07890 1332 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-216ENST00000497122 FIGNL2A6NMB9 653 aa9.36□□□□□ -0.91
SOX2-OT-216ENST00000497122 TTLL8A6PVC2 850 aa9.36□□□□□ -0.91
SOX2-OT-216ENST00000497122 DHX9Q08211 1270 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-216ENST00000497122 MCM6Q14566 821 aa9.36□□□□□ -0.91
SOX2-OT-216ENST00000497122 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-216ENST00000497122 RFC5P40937 340 aa9.35□□□□□ -0.91
SOX2-OT-216ENST00000497122 RELBQ01201 579 aa9.34□□□□□ -0.91
SOX2-OT-216ENST00000497122 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
SOX2-OT-216ENST00000497122 INTS6LQ5JSJ4 861 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-216ENST00000497122 PROSER2Q86WR7 435 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-216ENST00000497122 DZIP3Q86Y13 1208 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-216ENST00000497122 CCDC97Q96F63 343 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-216ENST00000497122 AGBL1Q96MI9 1066 aa9.34□□□□□ -0.91
SOX2-OT-216ENST00000497122 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
SOX2-OT-216ENST00000497122 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.92
SOX2-OT-216ENST00000497122 RAD21O60216 631 aa9.32□□□□□ -0.92
SOX2-OT-216ENST00000497122 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
SOX2-OT-216ENST00000497122 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
SOX2-OT-216ENST00000497122 Q6ZVU0 165 aa9.31□□□□□ -0.92
SOX2-OT-216ENST00000497122 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
SOX2-OT-216ENST00000497122 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
SOX2-OT-216ENST00000497122 TMPRSS4Q9NRS4 437 aa9.3□□□□□ -0.92
SOX2-OT-216ENST00000497122 PTSQ03393 145 aa9.29□□□□□ -0.92
SOX2-OT-216ENST00000497122 AEBP1Q8IUX7 1158 aa9.29□□□□□ -0.92
SOX2-OT-216ENST00000497122 POM121Q96HA1 1249 aa9.29□□□□□ -0.92
SOX2-OT-216ENST00000497122 INSM2Q96T92 566 aaPredicted RBP9.29□□□□□ -0.92
SOX2-OT-216ENST00000497122 ZNF395Q9H8N7 513 aaPredicted RBP9.29□□□□□ -0.92
SOX2-OT-216ENST00000497122 SPINT1O43278 529 aa9.28□□□□□ -0.92
SOX2-OT-216ENST00000497122 VSIG8P0DPA2 414 aa9.28□□□□□ -0.92
SOX2-OT-216ENST00000497122 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
SOX2-OT-216ENST00000497122 CTSOP43234 321 aaPredicted RBP9.27□□□□□ -0.93
SOX2-OT-216ENST00000497122 SERPINA10Q9UK55 444 aa9.27□□□□□ -0.93
SOX2-OT-216ENST00000497122 ERVH48-1M5A8F1 160 aa9.26□□□□□ -0.93
SOX2-OT-216ENST00000497122 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
SOX2-OT-216ENST00000497122 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
SOX2-OT-216ENST00000497122 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-216ENST00000497122 CCDC155Q8N6L0 562 aa9.25□□□□□ -0.93
SOX2-OT-216ENST00000497122 CDC14CA4D256 554 aa9.24□□□□□ -0.93
SOX2-OT-216ENST00000497122 TRIM34Q9BYJ4 488 aa9.24□□□□□ -0.93
SOX2-OT-216ENST00000497122 CYLDQ9NQC7 956 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms