RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 BCAR3O75815 825 aa17.82■□□□□ 0.44
SPTBN1-205ENST00000496323 MYH16Q9H6N6 1097 aa17.82■□□□□ 0.44
SPTBN1-205ENST00000496323 STRCP1A6NGW2 1772 aa17.82■□□□□ 0.44
SPTBN1-205ENST00000496323 MARF1Q9Y4F3 1742 aaKnown RBP17.81■□□□□ 0.44
SPTBN1-205ENST00000496323 NEFMP07197 916 aa17.81■□□□□ 0.44
SPTBN1-205ENST00000496323 SULT6B1Q6IMI4 303 aa17.81■□□□□ 0.44
SPTBN1-205ENST00000496323 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
SPTBN1-205ENST00000496323 USP54Q70EL1 1684 aa17.81■□□□□ 0.44
SPTBN1-205ENST00000496323 IL16Q14005 1332 aa17.81■□□□□ 0.44
SPTBN1-205ENST00000496323 XPCQ01831 940 aaPredicted RBP17.8■□□□□ 0.44
SPTBN1-205ENST00000496323 AMPHP49418 695 aa17.8■□□□□ 0.44
SPTBN1-205ENST00000496323 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
SPTBN1-205ENST00000496323 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
SPTBN1-205ENST00000496323 CRBNQ96SW2 442 aa17.79■□□□□ 0.44
SPTBN1-205ENST00000496323 MST1RQ04912 1400 aa17.79■□□□□ 0.44
SPTBN1-205ENST00000496323 ATF3P18847 181 aa17.78■□□□□ 0.44
SPTBN1-205ENST00000496323 HOXC9P31274 260 aa17.78■□□□□ 0.44
SPTBN1-205ENST00000496323 DCCP43146 1447 aa17.78■□□□□ 0.44
SPTBN1-205ENST00000496323 CCDC136Q96JN2 1154 aa17.78■□□□□ 0.44
SPTBN1-205ENST00000496323 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.44
SPTBN1-205ENST00000496323 RARSP54136 660 aaKnown RBP17.77■□□□□ 0.44
SPTBN1-205ENST00000496323 RGPD1P0DJD0 1748 aa17.76■□□□□ 0.43
SPTBN1-205ENST00000496323 ARHGEF10O15013 1369 aa17.76■□□□□ 0.43
SPTBN1-205ENST00000496323 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
SPTBN1-205ENST00000496323 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
SPTBN1-205ENST00000496323 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
SPTBN1-205ENST00000496323 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
SPTBN1-205ENST00000496323 EYA1Q99502 592 aa17.75■□□□□ 0.43
SPTBN1-205ENST00000496323 NFAT5O94916 1531 aa17.75■□□□□ 0.43
SPTBN1-205ENST00000496323 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
SPTBN1-205ENST00000496323 EXOSC9Q06265 439 aaKnown RBP17.74■□□□□ 0.43
SPTBN1-205ENST00000496323 KDRP35968 1356 aa17.74■□□□□ 0.43
SPTBN1-205ENST00000496323 CADPS2Q86UW7 1296 aa17.74■□□□□ 0.43
SPTBN1-205ENST00000496323 FAM83GA6ND36 823 aa17.72■□□□□ 0.43
SPTBN1-205ENST00000496323 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
SPTBN1-205ENST00000496323 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
SPTBN1-205ENST00000496323 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
SPTBN1-205ENST00000496323 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
SPTBN1-205ENST00000496323 IP6K1Q92551 441 aa17.71■□□□□ 0.43
SPTBN1-205ENST00000496323 DDX17Q92841 729 aaKnown RBP17.71■□□□□ 0.43
SPTBN1-205ENST00000496323 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
SPTBN1-205ENST00000496323 LMOD3Q0VAK6 560 aa17.71■□□□□ 0.43
SPTBN1-205ENST00000496323 TSHZ2Q9NRE2 1034 aa17.71■□□□□ 0.43
SPTBN1-205ENST00000496323 KIF1AQ12756 1690 aa17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 MSH6P52701 1360 aa17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 GCP02774 474 aa17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 USP19O94966 1318 aa17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 TRPM3Q9HCF6 1732 aaPredicted RBP17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
SPTBN1-205ENST00000496323 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
SPTBN1-205ENST00000496323 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
SPTBN1-205ENST00000496323 SLIT3O75094 1523 aa17.69■□□□□ 0.42
SPTBN1-205ENST00000496323 LAS1LQ9Y4W2 734 aaKnown RBP17.68■□□□□ 0.42
SPTBN1-205ENST00000496323 PDE3AQ14432 1141 aa17.68■□□□□ 0.42
SPTBN1-205ENST00000496323 ARHGEF25Q86VW2 580 aa17.68■□□□□ 0.42
SPTBN1-205ENST00000496323 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
SPTBN1-205ENST00000496323 MTHFSDQ2M296 383 aaKnown RBP17.67■□□□□ 0.42
SPTBN1-205ENST00000496323 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
SPTBN1-205ENST00000496323 GNAI1P63096 354 aa17.67■□□□□ 0.42
SPTBN1-205ENST00000496323 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
SPTBN1-205ENST00000496323 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
SPTBN1-205ENST00000496323 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
SPTBN1-205ENST00000496323 SSH1Q8WYL5 1049 aa17.66■□□□□ 0.42
SPTBN1-205ENST00000496323 MCM10Q7L590 875 aa17.65■□□□□ 0.42
SPTBN1-205ENST00000496323 TNNQ9UQP3 1299 aa17.65■□□□□ 0.42
SPTBN1-205ENST00000496323 NPHP3Q7Z494 1330 aa17.65■□□□□ 0.42
SPTBN1-205ENST00000496323 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.42
SPTBN1-205ENST00000496323 CANXP27824 592 aaKnown RBP17.64■□□□□ 0.42
SPTBN1-205ENST00000496323 XIRP1Q702N8 1843 aaKnown RBP17.64■□□□□ 0.41
SPTBN1-205ENST00000496323 NBPF6Q5VWK0 638 aa17.63■□□□□ 0.41
SPTBN1-205ENST00000496323 BRINP3Q76B58 766 aa17.63■□□□□ 0.41
SPTBN1-205ENST00000496323 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
SPTBN1-205ENST00000496323 NBPF4Q96M43 638 aa17.63■□□□□ 0.41
SPTBN1-205ENST00000496323 RLBP1P12271 317 aa17.63■□□□□ 0.41
SPTBN1-205ENST00000496323 TSPYL6Q8N831 410 aa17.63■□□□□ 0.41
SPTBN1-205ENST00000496323 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
SPTBN1-205ENST00000496323 LTN1O94822 1766 aa17.62■□□□□ 0.41
SPTBN1-205ENST00000496323 PHRF1Q9P1Y6 1649 aaKnown RBP17.62■□□□□ 0.41
SPTBN1-205ENST00000496323 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
SPTBN1-205ENST00000496323 VAMP4O75379 141 aa17.62■□□□□ 0.41
SPTBN1-205ENST00000496323 COG6Q9Y2V7 657 aa17.62■□□□□ 0.41
SPTBN1-205ENST00000496323 DLG5Q8TDM6 1919 aa17.61■□□□□ 0.41
SPTBN1-205ENST00000496323 PXDNQ92626 1479 aa17.61■□□□□ 0.41
SPTBN1-205ENST00000496323 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
SPTBN1-205ENST00000496323 GAS2L2Q8NHY3 880 aa17.61■□□□□ 0.41
SPTBN1-205ENST00000496323 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
SPTBN1-205ENST00000496323 CRB1P82279 1406 aa17.61■□□□□ 0.41
SPTBN1-205ENST00000496323 CHL1O00533 1208 aa17.6■□□□□ 0.41
SPTBN1-205ENST00000496323 SLAIN2Q9P270 581 aa17.6■□□□□ 0.41
SPTBN1-205ENST00000496323 C8orf58Q8NAV2 365 aa17.6■□□□□ 0.41
SPTBN1-205ENST00000496323 LRRC59Q96AG4 307 aaKnown RBP17.6■□□□□ 0.41
SPTBN1-205ENST00000496323 ALDH1L2Q3SY69 923 aa17.59■□□□□ 0.41
SPTBN1-205ENST00000496323 ZKSCAN2Q63HK3 967 aa17.59■□□□□ 0.41
SPTBN1-205ENST00000496323 TNS3Q68CZ2 1445 aa17.59■□□□□ 0.41
SPTBN1-205ENST00000496323 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
SPTBN1-205ENST00000496323 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
SPTBN1-205ENST00000496323 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms