RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
SHISA5-216ENST00000494854 VPS72Q15906 364 aa20.57■□□□□ 0.88
SHISA5-216ENST00000494854 CD163L1Q9NR16 1453 aa20.57■□□□□ 0.88
SHISA5-216ENST00000494854 SSH2Q76I76 1423 aa20.56■□□□□ 0.88
SHISA5-216ENST00000494854 TERF2IPQ9NYB0 399 aa20.56■□□□□ 0.88
SHISA5-216ENST00000494854 PHRF1Q9P1Y6 1649 aaKnown RBP20.56■□□□□ 0.88
SHISA5-216ENST00000494854 ZNF521Q96K83 1311 aa20.55■□□□□ 0.88
SHISA5-216ENST00000494854 CCDC146Q8IYE0 955 aa20.55■□□□□ 0.88
SHISA5-216ENST00000494854 USP19O94966 1318 aa20.55■□□□□ 0.88
SHISA5-216ENST00000494854 RRP1P56182 461 aaKnown RBP20.55■□□□□ 0.88
SHISA5-216ENST00000494854 GLI3P10071 1580 aa20.54■□□□□ 0.88
SHISA5-216ENST00000494854 CPSF1Q10570 1443 aaKnown RBP20.54■□□□□ 0.88
SHISA5-216ENST00000494854 NUTM2GQ5VZR2 741 aa20.54■□□□□ 0.88
SHISA5-216ENST00000494854 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
SHISA5-216ENST00000494854 KIF20BQ96Q89 1820 aa20.54■□□□□ 0.88
SHISA5-216ENST00000494854 UPF1Q92900 1129 aaKnown RBP eCLIP20.53■□□□□ 0.882e-12■■■■■ 45.3
SHISA5-216ENST00000494854 PRDM11Q9NQV5 511 aa20.53■□□□□ 0.88
SHISA5-216ENST00000494854 BTG4Q9NY30 223 aa20.53■□□□□ 0.88
SHISA5-216ENST00000494854 NRAPQ86VF7 1730 aa20.53■□□□□ 0.88
SHISA5-216ENST00000494854 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
SHISA5-216ENST00000494854 MTHFSP49914 203 aa20.52■□□□□ 0.88
SHISA5-216ENST00000494854 KIAA0232Q92628 1395 aa20.51■□□□□ 0.87
SHISA5-216ENST00000494854 ONECUT3O60422 494 aaPredicted RBP20.51■□□□□ 0.87
SHISA5-216ENST00000494854 HDGFL2Q7Z4V5 671 aaPredicted RBP20.51■□□□□ 0.87
SHISA5-216ENST00000494854 APAF1O14727 1248 aa20.51■□□□□ 0.87
SHISA5-216ENST00000494854 CPDO75976 1380 aa20.5■□□□□ 0.87
SHISA5-216ENST00000494854 GOLGA2Q08379 1002 aa20.5■□□□□ 0.87
SHISA5-216ENST00000494854 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
SHISA5-216ENST00000494854 NRKQ7Z2Y5 1582 aa20.5■□□□□ 0.87
SHISA5-216ENST00000494854 TTC21AQ8NDW8 1320 aa20.49■□□□□ 0.87
SHISA5-216ENST00000494854 GCP02774 474 aa20.49■□□□□ 0.87
SHISA5-216ENST00000494854 NLRP6P59044 892 aa20.49■□□□□ 0.87
SHISA5-216ENST00000494854 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
SHISA5-216ENST00000494854 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
SHISA5-216ENST00000494854 TTC21BQ7Z4L5 1316 aa20.48■□□□□ 0.87
SHISA5-216ENST00000494854 DUSP27Q5VZP5 1158 aa20.47■□□□□ 0.87
SHISA5-216ENST00000494854 PIK3C2AO00443 1686 aa20.47■□□□□ 0.87
SHISA5-216ENST00000494854 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
SHISA5-216ENST00000494854 FYB1O15117 783 aa20.47■□□□□ 0.87
SHISA5-216ENST00000494854 GGNBP2Q9H3C7 697 aa20.47■□□□□ 0.87
SHISA5-216ENST00000494854 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
SHISA5-216ENST00000494854 SLIT3O75094 1523 aa20.46■□□□□ 0.87
SHISA5-216ENST00000494854 CHRNA2Q15822 529 aa20.45■□□□□ 0.86
SHISA5-216ENST00000494854 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
SHISA5-216ENST00000494854 SPATA31A5Q5VU36 1347 aa20.45■□□□□ 0.86
SHISA5-216ENST00000494854 SPATA31A7Q8IWB4 1347 aa20.45■□□□□ 0.86
SHISA5-216ENST00000494854 SEPT12Q8IYM1 358 aa20.43■□□□□ 0.86
SHISA5-216ENST00000494854 LMO7Q8WWI1 1683 aa20.43■□□□□ 0.86
SHISA5-216ENST00000494854 RUNDC1Q96C34 613 aa20.43■□□□□ 0.86
SHISA5-216ENST00000494854 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
SHISA5-216ENST00000494854 BRWD3Q6RI45 1802 aa20.42■□□□□ 0.86
SHISA5-216ENST00000494854 TRMT2AQ8IZ69 625 aaKnown RBP20.42■□□□□ 0.86
SHISA5-216ENST00000494854 CAMTA1Q9Y6Y1 1673 aa20.41■□□□□ 0.86
SHISA5-216ENST00000494854 KCNH5Q8NCM2 988 aa20.41■□□□□ 0.86
SHISA5-216ENST00000494854 USP31Q70CQ4 1352 aa20.4■□□□□ 0.86
SHISA5-216ENST00000494854 AATKQ6ZMQ8 1374 aa20.4■□□□□ 0.86
SHISA5-216ENST00000494854 SPATA31A1Q5TZJ5 1347 aa20.4■□□□□ 0.86
SHISA5-216ENST00000494854 COL3A1P02461 1466 aaPredicted RBP20.39■□□□□ 0.86
SHISA5-216ENST00000494854 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.85
SHISA5-216ENST00000494854 E9PSI1 815 aa20.39■□□□□ 0.85
SHISA5-216ENST00000494854 EVA1CP58658 441 aa20.39■□□□□ 0.85
SHISA5-216ENST00000494854 FAM98CQ17RN3 349 aaKnown RBP20.39■□□□□ 0.85
SHISA5-216ENST00000494854 EXOC6Q8TAG9 804 aa20.39■□□□□ 0.85
SHISA5-216ENST00000494854 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
SHISA5-216ENST00000494854 CCDC125Q86Z20 511 aa20.38■□□□□ 0.85
SHISA5-216ENST00000494854 SPINK5Q9NQ38 1064 aaPredicted RBP20.38■□□□□ 0.85
SHISA5-216ENST00000494854 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
SHISA5-216ENST00000494854 PLIN1O60240 522 aa20.37■□□□□ 0.85
SHISA5-216ENST00000494854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
SHISA5-216ENST00000494854 WWC1Q8IX03 1113 aa20.37■□□□□ 0.85
SHISA5-216ENST00000494854 TCP11L2Q8N4U5 519 aa20.37■□□□□ 0.85
SHISA5-216ENST00000494854 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
SHISA5-216ENST00000494854 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
SHISA5-216ENST00000494854 KRT27Q7Z3Y8 459 aa20.36■□□□□ 0.85
SHISA5-216ENST00000494854 ARHGEF25Q86VW2 580 aa20.36■□□□□ 0.85
SHISA5-216ENST00000494854 MAP2P11137 1827 aaKnown RBP20.36■□□□□ 0.85
SHISA5-216ENST00000494854 COL18A1P39060 1754 aa20.36■□□□□ 0.85
SHISA5-216ENST00000494854 EP400Q96L91 3159 aa20.36■□□□□ 0.85
SHISA5-216ENST00000494854 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
SHISA5-216ENST00000494854 COL5A2P05997 1499 aaPredicted RBP20.35■□□□□ 0.85
SHISA5-216ENST00000494854 LARP1Q6PKG0 1096 aaKnown RBP20.34■□□□□ 0.85
SHISA5-216ENST00000494854 BARGINQ6ZT62 677 aa20.34■□□□□ 0.85
SHISA5-216ENST00000494854 NFAT5O94916 1531 aa20.34■□□□□ 0.85
SHISA5-216ENST00000494854 NME9Q86XW9 330 aa20.33■□□□□ 0.85
SHISA5-216ENST00000494854 NEUROD2Q15784 382 aa20.33■□□□□ 0.84
SHISA5-216ENST00000494854 RRP7AQ9Y3A4 280 aaKnown RBP20.33■□□□□ 0.84
SHISA5-216ENST00000494854 A0A0G2JS52 829 aa20.32■□□□□ 0.84
SHISA5-216ENST00000494854 MYT1Q01538 1121 aa20.32■□□□□ 0.84
SHISA5-216ENST00000494854 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
SHISA5-216ENST00000494854 ZRANB1Q9UGI0 708 aa20.32■□□□□ 0.84
SHISA5-216ENST00000494854 THRAP3Q9Y2W1 955 aaKnown RBP20.32■□□□□ 0.84
SHISA5-216ENST00000494854 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
SHISA5-216ENST00000494854 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
SHISA5-216ENST00000494854 ABCC6O95255 1503 aa20.31■□□□□ 0.84
SHISA5-216ENST00000494854 CRB1P82279 1406 aa20.3■□□□□ 0.84
SHISA5-216ENST00000494854 ZBTB7CA1YPR0 619 aa20.3■□□□□ 0.84
SHISA5-216ENST00000494854 U2SURPO15042 1029 aaKnown RBP20.3■□□□□ 0.84
SHISA5-216ENST00000494854 AXIN2Q9Y2T1 843 aa20.3■□□□□ 0.84
SHISA5-216ENST00000494854 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
SHISA5-216ENST00000494854 DIAPH1O60610 1272 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms