RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ARHGEF25Q86VW2 580 aa17.62■□□□□ 0.41
CLIP2-209ENST00000493166 GGNBP2Q9H3C7 697 aa17.62■□□□□ 0.41
CLIP2-209ENST00000493166 STRN4Q9NRL3 753 aa17.62■□□□□ 0.41
CLIP2-209ENST00000493166 COL5A2P05997 1499 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-209ENST00000493166 MAP2P11137 1827 aaKnown RBP17.61■□□□□ 0.41
CLIP2-209ENST00000493166 EVA1CP58658 441 aa17.61■□□□□ 0.41
CLIP2-209ENST00000493166 CGNL1Q0VF96 1302 aa17.61■□□□□ 0.41
CLIP2-209ENST00000493166 WNK3Q9BYP7 1800 aa17.59■□□□□ 0.41
CLIP2-209ENST00000493166 WASHC2AQ641Q2 1341 aa17.59■□□□□ 0.41
CLIP2-209ENST00000493166 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.4
CLIP2-209ENST00000493166 SPATA31A5Q5VU36 1347 aa17.57■□□□□ 0.4
CLIP2-209ENST00000493166 SPATA31A7Q8IWB4 1347 aa17.57■□□□□ 0.4
CLIP2-209ENST00000493166 LARP1Q6PKG0 1096 aaKnown RBP17.56■□□□□ 0.4
CLIP2-209ENST00000493166 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
CLIP2-209ENST00000493166 EP400Q96L91 3159 aa17.56■□□□□ 0.4
CLIP2-209ENST00000493166 THSD7AQ9UPZ6 1657 aa17.55■□□□□ 0.4
CLIP2-209ENST00000493166 SPATA31A1Q5TZJ5 1347 aa17.55■□□□□ 0.4
CLIP2-209ENST00000493166 KNSTRNQ9Y448 316 aa17.55■□□□□ 0.4
CLIP2-209ENST00000493166 CRB1P82279 1406 aa17.55■□□□□ 0.4
CLIP2-209ENST00000493166 NSD2O96028 1365 aa17.54■□□□□ 0.4
CLIP2-209ENST00000493166 RGPD2P0DJD1 1756 aa17.54■□□□□ 0.4
CLIP2-209ENST00000493166 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
CLIP2-209ENST00000493166 PEAK1Q9H792 1746 aa17.54■□□□□ 0.4
CLIP2-209ENST00000493166 BLMP54132 1417 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-209ENST00000493166 MAP3K19Q56UN5 1328 aa17.53■□□□□ 0.4
CLIP2-209ENST00000493166 WDR17Q8IZU2 1322 aa17.53■□□□□ 0.4
CLIP2-209ENST00000493166 A0A0G2JS52 829 aa17.53■□□□□ 0.4
CLIP2-209ENST00000493166 FBLN1P23142 703 aa17.53■□□□□ 0.4
CLIP2-209ENST00000493166 MYT1Q01538 1121 aa17.53■□□□□ 0.4
CLIP2-209ENST00000493166 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
CLIP2-209ENST00000493166 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.4
CLIP2-209ENST00000493166 AMPHP49418 695 aa17.52■□□□□ 0.4
CLIP2-209ENST00000493166 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
CLIP2-209ENST00000493166 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.4
CLIP2-209ENST00000493166 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.39
CLIP2-209ENST00000493166 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
CLIP2-209ENST00000493166 SEPT12Q8IYM1 358 aa17.51■□□□□ 0.39
CLIP2-209ENST00000493166 IP6K1Q92551 441 aa17.51■□□□□ 0.39
CLIP2-209ENST00000493166 ERBB3P21860 1342 aa17.5■□□□□ 0.39
CLIP2-209ENST00000493166 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
CLIP2-209ENST00000493166 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
CLIP2-209ENST00000493166 HOXC9P31274 260 aa17.49■□□□□ 0.39
CLIP2-209ENST00000493166 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
CLIP2-209ENST00000493166 THRAP3Q9Y2W1 955 aaKnown RBP17.49■□□□□ 0.39
CLIP2-209ENST00000493166 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
CLIP2-209ENST00000493166 FLT4P35916 1363 aa17.48■□□□□ 0.39
CLIP2-209ENST00000493166 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
CLIP2-209ENST00000493166 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
CLIP2-209ENST00000493166 TNNT2P45379 298 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-209ENST00000493166 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-209ENST00000493166 MORC1Q86VD1 984 aa17.47■□□□□ 0.39
CLIP2-209ENST00000493166 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-209ENST00000493166 PER1O15534 1290 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-209ENST00000493166 CARD10Q9BWT7 1032 aa17.46■□□□□ 0.39
CLIP2-209ENST00000493166 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
CLIP2-209ENST00000493166 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-209ENST00000493166 NLRP2Q9NX02 1062 aa17.45■□□□□ 0.38
CLIP2-209ENST00000493166 EMILIN1Q9Y6C2 1016 aa17.45■□□□□ 0.38
CLIP2-209ENST00000493166 KRT27Q7Z3Y8 459 aa17.44■□□□□ 0.38
CLIP2-209ENST00000493166 INSRP06213 1382 aa17.43■□□□□ 0.38
CLIP2-209ENST00000493166 CC2D1BQ5T0F9 858 aaKnown RBP17.43■□□□□ 0.38
CLIP2-209ENST00000493166 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
CLIP2-209ENST00000493166 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
CLIP2-209ENST00000493166 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
CLIP2-209ENST00000493166 DISP2A7MBM2 1401 aa17.4■□□□□ 0.38
CLIP2-209ENST00000493166 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-209ENST00000493166 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-209ENST00000493166 RGPD1P0DJD0 1748 aa17.39■□□□□ 0.37
CLIP2-209ENST00000493166 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
CLIP2-209ENST00000493166 SBF2Q86WG5 1849 aa17.38■□□□□ 0.37
CLIP2-209ENST00000493166 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLIP2-209ENST00000493166 IL2RBP14784 551 aa17.37■□□□□ 0.37
CLIP2-209ENST00000493166 DDB1Q16531 1140 aa17.37■□□□□ 0.37
CLIP2-209ENST00000493166 TNS2Q63HR2 1409 aa17.37■□□□□ 0.37
CLIP2-209ENST00000493166 SHANK3Q9BYB0 1731 aa17.36■□□□□ 0.37
CLIP2-209ENST00000493166 FAM182BQ5T319 152 aa17.36■□□□□ 0.37
CLIP2-209ENST00000493166 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
CLIP2-209ENST00000493166 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
CLIP2-209ENST00000493166 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
CLIP2-209ENST00000493166 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
CLIP2-209ENST00000493166 KAT6BQ8WYB5 2073 aa17.34■□□□□ 0.37
CLIP2-209ENST00000493166 MEGF6O75095 1541 aa17.33■□□□□ 0.37
CLIP2-209ENST00000493166 OVOS2A0A0G2JMS6 1433 aa17.33■□□□□ 0.36
CLIP2-209ENST00000493166 EXOC5O00471 708 aa17.33■□□□□ 0.36
CLIP2-209ENST00000493166 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
CLIP2-209ENST00000493166 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
CLIP2-209ENST00000493166 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
CLIP2-209ENST00000493166 MTHFSP49914 203 aa17.32■□□□□ 0.36
CLIP2-209ENST00000493166 FAM196AQ6ZSG2 479 aa17.32■□□□□ 0.36
CLIP2-209ENST00000493166 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
CLIP2-209ENST00000493166 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
CLIP2-209ENST00000493166 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
CLIP2-209ENST00000493166 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
CLIP2-209ENST00000493166 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
CLIP2-209ENST00000493166 EYA1Q99502 592 aa17.29■□□□□ 0.36
CLIP2-209ENST00000493166 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
CLIP2-209ENST00000493166 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CLIP2-209ENST00000493166 NHSQ6T4R5 1651 aa17.28■□□□□ 0.36
CLIP2-209ENST00000493166 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
CLIP2-209ENST00000493166 IGSF1Q8N6C5 1336 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms