RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 NUTM2BA6NNL0 878 aaPredicted RBP18.68■□□□□ 0.58
PDZRN3-210ENST00000492909 NUTM2EB1AL46 878 aaPredicted RBP18.68■□□□□ 0.58
PDZRN3-210ENST00000492909 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
PDZRN3-210ENST00000492909 MED1Q15648 1581 aaPredicted RBP18.68■□□□□ 0.58
PDZRN3-210ENST00000492909 GCP02774 474 aa18.68■□□□□ 0.58
PDZRN3-210ENST00000492909 PHRF1Q9P1Y6 1649 aaKnown RBP18.67■□□□□ 0.58
PDZRN3-210ENST00000492909 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
PDZRN3-210ENST00000492909 CRYBG1Q9Y4K1 1723 aa18.66■□□□□ 0.58
PDZRN3-210ENST00000492909 IL13P35225 146 aa18.66■□□□□ 0.58
PDZRN3-210ENST00000492909 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
PDZRN3-210ENST00000492909 CCDC146Q8IYE0 955 aa18.66■□□□□ 0.58
PDZRN3-210ENST00000492909 CABLES1Q8TDN4 633 aa18.66■□□□□ 0.58
PDZRN3-210ENST00000492909 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
PDZRN3-210ENST00000492909 HOXC9P31274 260 aa18.64■□□□□ 0.57
PDZRN3-210ENST00000492909 EIF4A2Q14240 407 aaKnown RBP18.64■□□□□ 0.57
PDZRN3-210ENST00000492909 RUNDC1Q96C34 613 aa18.64■□□□□ 0.57
PDZRN3-210ENST00000492909 LRP6O75581 1613 aa18.63■□□□□ 0.57
PDZRN3-210ENST00000492909 PNNQ9H307 717 aaKnown RBP18.63■□□□□ 0.57
PDZRN3-210ENST00000492909 COL22A1Q8NFW1 1626 aaPredicted RBP18.62■□□□□ 0.57
PDZRN3-210ENST00000492909 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
PDZRN3-210ENST00000492909 IP6K1Q92551 441 aa18.62■□□□□ 0.57
PDZRN3-210ENST00000492909 RGPD1P0DJD0 1748 aa18.61■□□□□ 0.57
PDZRN3-210ENST00000492909 SPATA31A6Q5VVP1 1343 aa18.61■□□□□ 0.57
PDZRN3-210ENST00000492909 FCHSD2O94868 740 aa18.61■□□□□ 0.57
PDZRN3-210ENST00000492909 APAF1O14727 1248 aa18.6■□□□□ 0.57
PDZRN3-210ENST00000492909 ADAMTS2O95450 1211 aa18.6■□□□□ 0.57
PDZRN3-210ENST00000492909 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
PDZRN3-210ENST00000492909 ZBTB7CA1YPR0 619 aa18.6■□□□□ 0.57
PDZRN3-210ENST00000492909 NGEFQ8N5V2 710 aa18.59■□□□□ 0.57
PDZRN3-210ENST00000492909 ABCA3Q99758 1704 aa18.59■□□□□ 0.57
PDZRN3-210ENST00000492909 PLEKHF1Q96S99 279 aa18.58■□□□□ 0.57
PDZRN3-210ENST00000492909 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.57
PDZRN3-210ENST00000492909 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.56
PDZRN3-210ENST00000492909 HMOX1P09601 288 aa18.58■□□□□ 0.56
PDZRN3-210ENST00000492909 HAP1P54257 671 aaPredicted RBP18.58■□□□□ 0.56
PDZRN3-210ENST00000492909 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-210ENST00000492909 TCP11L2Q8N4U5 519 aa18.58■□□□□ 0.56
PDZRN3-210ENST00000492909 NEFMP07197 916 aa18.57■□□□□ 0.56
PDZRN3-210ENST00000492909 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
PDZRN3-210ENST00000492909 PRKAR2BP31323 418 aa18.56■□□□□ 0.56
PDZRN3-210ENST00000492909 RGPD5Q99666 1765 aa18.56■□□□□ 0.56
PDZRN3-210ENST00000492909 CPDO75976 1380 aa18.56■□□□□ 0.56
PDZRN3-210ENST00000492909 ABCC6O95255 1503 aa18.55■□□□□ 0.56
PDZRN3-210ENST00000492909 LTV1Q96GA3 475 aaPredicted RBP18.55■□□□□ 0.56
PDZRN3-210ENST00000492909 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
PDZRN3-210ENST00000492909 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
PDZRN3-210ENST00000492909 C8orf37Q96NL8 207 aa18.54■□□□□ 0.56
PDZRN3-210ENST00000492909 EYA1Q99502 592 aa18.54■□□□□ 0.56
PDZRN3-210ENST00000492909 COL18A1P39060 1754 aa18.54■□□□□ 0.56
PDZRN3-210ENST00000492909 IGSF1Q8N6C5 1336 aa18.54■□□□□ 0.56
PDZRN3-210ENST00000492909 KIAA0232Q92628 1395 aa18.53■□□□□ 0.56
PDZRN3-210ENST00000492909 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
PDZRN3-210ENST00000492909 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
PDZRN3-210ENST00000492909 RGPD2P0DJD1 1756 aa18.52■□□□□ 0.55
PDZRN3-210ENST00000492909 NEUROD2Q15784 382 aa18.52■□□□□ 0.55
PDZRN3-210ENST00000492909 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.55
PDZRN3-210ENST00000492909 ZNF521Q96K83 1311 aa18.52■□□□□ 0.55
PDZRN3-210ENST00000492909 KDRP35968 1356 aa18.52■□□□□ 0.55
PDZRN3-210ENST00000492909 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
PDZRN3-210ENST00000492909 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
PDZRN3-210ENST00000492909 FAM83GA6ND36 823 aa18.5■□□□□ 0.55
PDZRN3-210ENST00000492909 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
PDZRN3-210ENST00000492909 ANKRD24Q8TF21 1146 aa18.5■□□□□ 0.55
PDZRN3-210ENST00000492909 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
PDZRN3-210ENST00000492909 PRDM11Q9NQV5 511 aa18.5■□□□□ 0.55
PDZRN3-210ENST00000492909 CHRNA2Q15822 529 aa18.49■□□□□ 0.55
PDZRN3-210ENST00000492909 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
PDZRN3-210ENST00000492909 ERBB3P21860 1342 aa18.48■□□□□ 0.55
PDZRN3-210ENST00000492909 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
PDZRN3-210ENST00000492909 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
PDZRN3-210ENST00000492909 FAM208AQ9UK61 1670 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-210ENST00000492909 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 DLG5Q8TDM6 1919 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 CAMTA1Q9Y6Y1 1673 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 AFF2P51816 1311 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 RIPK4P57078 832 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 RGS17Q9UGC6 210 aaPredicted RBP18.47■□□□□ 0.55
PDZRN3-210ENST00000492909 LMO7Q8WWI1 1683 aa18.46■□□□□ 0.55
PDZRN3-210ENST00000492909 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
PDZRN3-210ENST00000492909 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
PDZRN3-210ENST00000492909 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
PDZRN3-210ENST00000492909 WDR63Q8IWG1 891 aa18.44■□□□□ 0.54
PDZRN3-210ENST00000492909 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
PDZRN3-210ENST00000492909 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
PDZRN3-210ENST00000492909 PLCH1Q4KWH8 1693 aa18.42■□□□□ 0.54
PDZRN3-210ENST00000492909 FNBP4Q8N3X1 1017 aaPredicted RBP18.42■□□□□ 0.54
PDZRN3-210ENST00000492909 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
PDZRN3-210ENST00000492909 USP21Q9UK80 565 aa18.42■□□□□ 0.54
PDZRN3-210ENST00000492909 COL14A1Q05707 1796 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-210ENST00000492909 E9PSI1 815 aa18.41■□□□□ 0.54
PDZRN3-210ENST00000492909 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
PDZRN3-210ENST00000492909 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
PDZRN3-210ENST00000492909 BCL9LQ86UU0 1499 aa18.41■□□□□ 0.54
PDZRN3-210ENST00000492909 SLIT2O94813 1529 aa18.41■□□□□ 0.54
PDZRN3-210ENST00000492909 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
PDZRN3-210ENST00000492909 FKBP8Q14318 412 aa18.4■□□□□ 0.54
PDZRN3-210ENST00000492909 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms