RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 TTC21BQ7Z4L5 1316 aa8.58□□□□□ -1.04
RBM39-237ENST00000492779 APAF1O14727 1248 aa8.58□□□□□ -1.04
RBM39-237ENST00000492779 NFKBIBQ15653 356 aa8.58□□□□□ -1.04
RBM39-237ENST00000492779 PAXIP1Q6ZW49 1069 aaPredicted RBP8.58□□□□□ -1.04
RBM39-237ENST00000492779 MS4A1P11836 297 aa8.57□□□□□ -1.04
RBM39-237ENST00000492779 RRS1Q15050 365 aaKnown RBP8.57□□□□□ -1.04
RBM39-237ENST00000492779 CFAP44Q96MT7 982 aa8.57□□□□□ -1.04
RBM39-237ENST00000492779 USP6P35125 1406 aa8.57□□□□□ -1.04
RBM39-237ENST00000492779 ZBTB7CA1YPR0 619 aa8.57□□□□□ -1.04
RBM39-237ENST00000492779 TOM1O60784 492 aa8.57□□□□□ -1.04
RBM39-237ENST00000492779 NLRP6P59044 892 aa8.57□□□□□ -1.04
RBM39-237ENST00000492779 SLFN5Q08AF3 891 aa8.57□□□□□ -1.04
RBM39-237ENST00000492779 TRMT2AQ8IZ69 625 aaKnown RBP8.57□□□□□ -1.04
RBM39-237ENST00000492779 EP400Q96L91 3159 aa8.56□□□□□ -1.04
RBM39-237ENST00000492779 POLR3AO14802 1390 aaPredicted RBP8.56□□□□□ -1.04
RBM39-237ENST00000492779 PPM1GO15355 546 aaPredicted RBP8.56□□□□□ -1.04
RBM39-237ENST00000492779 FRAT2O75474 233 aaPredicted RBP8.56□□□□□ -1.04
RBM39-237ENST00000492779 PUS7Q96PZ0 661 aaKnown RBP8.56□□□□□ -1.04
RBM39-237ENST00000492779 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.56□□□□□ -1.04
RBM39-237ENST00000492779 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
RBM39-237ENST00000492779 NCOA3Q9Y6Q9 1424 aa8.56□□□□□ -1.04
RBM39-237ENST00000492779 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
RBM39-237ENST00000492779 FRAT1Q92837 279 aaPredicted RBP8.55□□□□□ -1.04
RBM39-237ENST00000492779 DCCP43146 1447 aa8.55□□□□□ -1.04
RBM39-237ENST00000492779 SRCAPQ6ZRS2 3230 aa8.55□□□□□ -1.04
RBM39-237ENST00000492779 HSPA1LP34931 641 aa8.55□□□□□ -1.04
RBM39-237ENST00000492779 PANK1Q8TE04 598 aa8.55□□□□□ -1.04
RBM39-237ENST00000492779 TOPAZ1Q8N9V7 1692 aa8.55□□□□□ -1.04
RBM39-237ENST00000492779 SSH2Q76I76 1423 aa8.55□□□□□ -1.04
RBM39-237ENST00000492779 ROBO1Q9Y6N7 1651 aa8.54□□□□□ -1.04
RBM39-237ENST00000492779 ZC3H6P61129 1189 aaKnown RBP8.54□□□□□ -1.04
RBM39-237ENST00000492779 PKNOX2Q96KN3 472 aa8.54□□□□□ -1.04
RBM39-237ENST00000492779 ZNF692Q9BU19 519 aaPredicted RBP8.54□□□□□ -1.04
RBM39-237ENST00000492779 RRP7AQ9Y3A4 280 aaKnown RBP8.54□□□□□ -1.04
RBM39-237ENST00000492779 EMILIN1Q9Y6C2 1016 aa8.54□□□□□ -1.04
RBM39-237ENST00000492779 RLBP1P12271 317 aa8.54□□□□□ -1.04
RBM39-237ENST00000492779 MORC1Q86VD1 984 aa8.54□□□□□ -1.04
RBM39-237ENST00000492779 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
RBM39-237ENST00000492779 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
RBM39-237ENST00000492779 NPHP3Q7Z494 1330 aa8.53□□□□□ -1.04
RBM39-237ENST00000492779 SOS2Q07890 1332 aaPredicted RBP8.53□□□□□ -1.04
RBM39-237ENST00000492779 PXDNQ92626 1479 aa8.52□□□□□ -1.05
RBM39-237ENST00000492779 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
RBM39-237ENST00000492779 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
RBM39-237ENST00000492779 CHRNA2Q15822 529 aa8.52□□□□□ -1.05
RBM39-237ENST00000492779 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
RBM39-237ENST00000492779 EDC4Q6P2E9 1401 aaKnown RBP8.52□□□□□ -1.05
RBM39-237ENST00000492779 SPATA31A3Q5VYP0 1347 aa8.52□□□□□ -1.05
RBM39-237ENST00000492779 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
RBM39-237ENST00000492779 COG3Q96JB2 828 aa8.52□□□□□ -1.05
RBM39-237ENST00000492779 BCL2L13Q9BXK5 485 aa8.52□□□□□ -1.05
RBM39-237ENST00000492779 MTHFSP49914 203 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 COG6Q9Y2V7 657 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 INSRP06213 1382 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 NINLQ9Y2I6 1382 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 GCP02774 474 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 WDR43Q15061 677 aaKnown RBP eCLIP8.51□□□□□ -1.053e-7■■□□□ 11.8
RBM39-237ENST00000492779 HSP90AB2PQ58FF8 381 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 POLKQ9UBT6 870 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
RBM39-237ENST00000492779 PIK3C2AO00443 1686 aa8.5□□□□□ -1.05
RBM39-237ENST00000492779 AKAP12Q02952 1782 aa8.5□□□□□ -1.05
RBM39-237ENST00000492779 FAM161AQ3B820 660 aa8.5□□□□□ -1.05
RBM39-237ENST00000492779 CENPQQ7L2Z9 268 aaPredicted RBP8.5□□□□□ -1.05
RBM39-237ENST00000492779 LTV1Q96GA3 475 aaPredicted RBP8.5□□□□□ -1.05
RBM39-237ENST00000492779 ITSN1Q15811 1721 aa8.5□□□□□ -1.05
RBM39-237ENST00000492779 MON2Q7Z3U7 1717 aa8.5□□□□□ -1.05
RBM39-237ENST00000492779 GSE1Q14687 1217 aa8.49□□□□□ -1.05
RBM39-237ENST00000492779 NRKQ7Z2Y5 1582 aa8.49□□□□□ -1.05
RBM39-237ENST00000492779 MAP3K19Q56UN5 1328 aa8.49□□□□□ -1.05
RBM39-237ENST00000492779 WWC1Q8IX03 1113 aa8.48□□□□□ -1.05
RBM39-237ENST00000492779 OVOS2A0A0J9YW53 1432 aa8.48□□□□□ -1.05
RBM39-237ENST00000492779 TNS3Q68CZ2 1445 aa8.48□□□□□ -1.05
RBM39-237ENST00000492779 OVOS2Q6IE36 1432 aa8.48□□□□□ -1.05
RBM39-237ENST00000492779 LRRC59Q96AG4 307 aaKnown RBP8.48□□□□□ -1.05
RBM39-237ENST00000492779 SHPRHQ149N8 1683 aa8.48□□□□□ -1.05
RBM39-237ENST00000492779 MED1Q15648 1581 aaPredicted RBP8.47□□□□□ -1.05
RBM39-237ENST00000492779 CLUAP1Q96AJ1 413 aa8.47□□□□□ -1.05
RBM39-237ENST00000492779 TRPM3Q9HCF6 1732 aaPredicted RBP8.47□□□□□ -1.05
RBM39-237ENST00000492779 TTC21AQ8NDW8 1320 aa8.47□□□□□ -1.05
RBM39-237ENST00000492779 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
RBM39-237ENST00000492779 KIAA0232Q92628 1395 aa8.47□□□□□ -1.05
RBM39-237ENST00000492779 FAM83GA6ND36 823 aa8.46□□□□□ -1.05
RBM39-237ENST00000492779 USHBP1Q8N6Y0 703 aa8.46□□□□□ -1.05
RBM39-237ENST00000492779 MARF1Q9Y4F3 1742 aaKnown RBP8.46□□□□□ -1.06
RBM39-237ENST00000492779 PNPLA6Q8IY17 1366 aa8.46□□□□□ -1.06
RBM39-237ENST00000492779 SLKQ9H2G2 1235 aaPredicted RBP8.46□□□□□ -1.06
RBM39-237ENST00000492779 USP35Q9P2H5 1018 aa8.46□□□□□ -1.06
RBM39-237ENST00000492779 SBNO1A3KN83 1393 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 AMPHP49418 695 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 COL16A1Q07092 1604 aaPredicted RBP8.45□□□□□ -1.06
RBM39-237ENST00000492779 NHSL1Q5SYE7 1610 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 KIF1AQ12756 1690 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 PHLPP1O60346 1717 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 USP31Q70CQ4 1352 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 HMOX1P09601 288 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 ARHGEF25Q86VW2 580 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms