RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 IL13P35225 146 aa29.34■■■□□ 2.29
PSPC1-204ENST00000492741 EIF4A2Q14240 407 aaKnown RBP29.34■■■□□ 2.29
PSPC1-204ENST00000492741 LTV1Q96GA3 475 aaPredicted RBP29.32■■■□□ 2.28
PSPC1-204ENST00000492741 CRYBG1Q9Y4K1 1723 aa29.32■■■□□ 2.28
PSPC1-204ENST00000492741 KIAA0232Q92628 1395 aa29.31■■■□□ 2.28
PSPC1-204ENST00000492741 SHPRHQ149N8 1683 aa29.31■■■□□ 2.28
PSPC1-204ENST00000492741 PRDM11Q9NQV5 511 aa29.31■■■□□ 2.28
PSPC1-204ENST00000492741 HNRNPUQ00839 825 aaKnown RBP eCLIP29.3■■■□□ 2.28
PSPC1-204ENST00000492741 CHRNA2Q15822 529 aa29.3■■■□□ 2.28
PSPC1-204ENST00000492741 CPDO75976 1380 aa29.29■■■□□ 2.28
PSPC1-204ENST00000492741 HSPA1LP34931 641 aa29.26■■■□□ 2.27
PSPC1-204ENST00000492741 CCDC146Q8IYE0 955 aa29.26■■■□□ 2.27
PSPC1-204ENST00000492741 AXIN2Q9Y2T1 843 aa29.26■■■□□ 2.27
PSPC1-204ENST00000492741 COL22A1Q8NFW1 1626 aaPredicted RBP29.25■■■□□ 2.27
PSPC1-204ENST00000492741 NUTM2BA6NNL0 878 aaPredicted RBP29.25■■■□□ 2.27
PSPC1-204ENST00000492741 NUTM2EB1AL46 878 aaPredicted RBP29.25■■■□□ 2.27
PSPC1-204ENST00000492741 NUTM2AQ8IVF1 878 aaPredicted RBP29.25■■■□□ 2.27
PSPC1-204ENST00000492741 JCADQ9P266 1359 aa29.25■■■□□ 2.27
PSPC1-204ENST00000492741 ABCA3Q99758 1704 aa29.24■■■□□ 2.27
PSPC1-204ENST00000492741 BLMP54132 1417 aaPredicted RBP29.24■■■□□ 2.27
PSPC1-204ENST00000492741 HMOX1P09601 288 aa29.24■■■□□ 2.27
PSPC1-204ENST00000492741 PNNQ9H307 717 aaKnown RBP29.24■■■□□ 2.27
PSPC1-204ENST00000492741 ANKRD24Q8TF21 1146 aa29.23■■■□□ 2.27
PSPC1-204ENST00000492741 SENP3-EIF4A1A0A087X0R7 540 aa29.23■■■□□ 2.27
PSPC1-204ENST00000492741 FCHSD2O94868 740 aa29.21■■■□□ 2.27
PSPC1-204ENST00000492741 RUNDC1Q96C34 613 aa29.2■■■□□ 2.27
PSPC1-204ENST00000492741 EYA1Q99502 592 aa29.2■■■□□ 2.27
PSPC1-204ENST00000492741 FAM83GA6ND36 823 aa29.2■■■□□ 2.26
PSPC1-204ENST00000492741 ADAMTS2O95450 1211 aa29.2■■■□□ 2.26
PSPC1-204ENST00000492741 NEFMP07197 916 aa29.2■■■□□ 2.26
PSPC1-204ENST00000492741 SULT6B1Q6IMI4 303 aa29.2■■■□□ 2.26
PSPC1-204ENST00000492741 CSB-PGBD3P0DP91 1061 aa29.18■■■□□ 2.26
PSPC1-204ENST00000492741 RSPH6AQ9H0K4 717 aa29.17■■■□□ 2.26
PSPC1-204ENST00000492741 ABCC6O95255 1503 aa29.16■■■□□ 2.26
PSPC1-204ENST00000492741 ERBB3P21860 1342 aa29.16■■■□□ 2.26
PSPC1-204ENST00000492741 MAPK8IP3Q9UPT6 1336 aa29.16■■■□□ 2.26
PSPC1-204ENST00000492741 PRKAR2BP31323 418 aa29.16■■■□□ 2.26
PSPC1-204ENST00000492741 SALL2Q9Y467 1007 aaPredicted RBP29.16■■■□□ 2.26
PSPC1-204ENST00000492741 IGSF1Q8N6C5 1336 aa29.15■■■□□ 2.26
PSPC1-204ENST00000492741 COL18A1P39060 1754 aa29.15■■■□□ 2.26
PSPC1-204ENST00000492741 RGPD5Q99666 1765 aa29.15■■■□□ 2.26
PSPC1-204ENST00000492741 APAF1O14727 1248 aa29.14■■■□□ 2.26
PSPC1-204ENST00000492741 AEBP1Q8IUX7 1158 aa29.14■■■□□ 2.26
PSPC1-204ENST00000492741 EVA1CP58658 441 aa29.14■■■□□ 2.25
PSPC1-204ENST00000492741 NBPF6Q5VWK0 638 aa29.14■■■□□ 2.25
PSPC1-204ENST00000492741 NBPF4Q96M43 638 aa29.14■■■□□ 2.25
PSPC1-204ENST00000492741 USHBP1Q8N6Y0 703 aa29.13■■■□□ 2.25
PSPC1-204ENST00000492741 PLEKHF1Q96S99 279 aa29.13■■■□□ 2.25
PSPC1-204ENST00000492741 NLRP2Q9NX02 1062 aa29.12■■■□□ 2.25
PSPC1-204ENST00000492741 SPATA31A6Q5VVP1 1343 aa29.12■■■□□ 2.25
PSPC1-204ENST00000492741 BTG4Q9NY30 223 aa29.11■■■□□ 2.25
PSPC1-204ENST00000492741 TCP11L2Q8N4U5 519 aa29.11■■■□□ 2.25
PSPC1-204ENST00000492741 STRN4Q9NRL3 753 aa29.11■■■□□ 2.25
PSPC1-204ENST00000492741 CAMTA1Q9Y6Y1 1673 aa29.1■■■□□ 2.25
PSPC1-204ENST00000492741 RGPD1P0DJD0 1748 aa29.1■■■□□ 2.25
PSPC1-204ENST00000492741 NEUROD2Q15784 382 aa29.08■■■□□ 2.25
PSPC1-204ENST00000492741 LMO7Q8WWI1 1683 aa29.07■■■□□ 2.24
PSPC1-204ENST00000492741 TOM1L2Q6ZVM7 507 aa29.07■■■□□ 2.24
PSPC1-204ENST00000492741 COL14A1Q05707 1796 aaKnown RBP29.07■■■□□ 2.24
PSPC1-204ENST00000492741 RRP7AQ9Y3A4 280 aaKnown RBP29.06■■■□□ 2.24
PSPC1-204ENST00000492741 ZBED9Q6R2W3 1325 aa29.06■■■□□ 2.24
PSPC1-204ENST00000492741 KDRP35968 1356 aa29.06■■■□□ 2.24
PSPC1-204ENST00000492741 PHACTR3Q96KR7 559 aa29.06■■■□□ 2.24
PSPC1-204ENST00000492741 WDR17Q8IZU2 1322 aa29.05■■■□□ 2.24
PSPC1-204ENST00000492741 COL5A2P05997 1499 aaPredicted RBP29.05■■■□□ 2.24
PSPC1-204ENST00000492741 RGPD2P0DJD1 1756 aa29.04■■■□□ 2.24
PSPC1-204ENST00000492741 C8orf37Q96NL8 207 aa29.03■■■□□ 2.24
PSPC1-204ENST00000492741 MEX3CQ5U5Q3 659 aaKnown RBP29.03■■■□□ 2.24
PSPC1-204ENST00000492741 TMPOP42166 694 aaKnown RBP29.02■■■□□ 2.24
PSPC1-204ENST00000492741 NGEFQ8N5V2 710 aa29.02■■■□□ 2.24
PSPC1-204ENST00000492741 NGLY1Q96IV0 654 aa29.02■■■□□ 2.24
PSPC1-204ENST00000492741 LARP1Q6PKG0 1096 aaKnown RBP29.01■■■□□ 2.23
PSPC1-204ENST00000492741 FBXO41Q8TF61 875 aa29.01■■■□□ 2.23
PSPC1-204ENST00000492741 CENPBP07199 599 aaPredicted RBP28.99■■■□□ 2.23
PSPC1-204ENST00000492741 RIPK4P57078 832 aa28.99■■■□□ 2.23
PSPC1-204ENST00000492741 FAM208AQ9UK61 1670 aaKnown RBP28.99■■■□□ 2.23
PSPC1-204ENST00000492741 NFE2L2Q16236 605 aa28.98■■■□□ 2.23
PSPC1-204ENST00000492741 RAPGEF4Q8WZA2 1011 aa28.98■■■□□ 2.23
PSPC1-204ENST00000492741 CARD10Q9BWT7 1032 aa28.97■■■□□ 2.23
PSPC1-204ENST00000492741 USP35Q9P2H5 1018 aa28.96■■■□□ 2.23
PSPC1-204ENST00000492741 NCAPD2Q15021 1401 aa28.95■■■□□ 2.23
PSPC1-204ENST00000492741 LRP6O75581 1613 aa28.95■■■□□ 2.23
PSPC1-204ENST00000492741 TATP17735 454 aaPredicted RBP28.94■■■□□ 2.22
PSPC1-204ENST00000492741 PLCH1Q4KWH8 1693 aa28.94■■■□□ 2.22
PSPC1-204ENST00000492741 CRB1P82279 1406 aa28.94■■■□□ 2.22
PSPC1-204ENST00000492741 MTHFSDQ2M296 383 aaKnown RBP28.94■■■□□ 2.22
PSPC1-204ENST00000492741 GAS2L2Q8NHY3 880 aa28.94■■■□□ 2.22
PSPC1-204ENST00000492741 NCBP3Q53F19 620 aaKnown RBP28.92■■■□□ 2.22
PSPC1-204ENST00000492741 PLEKHO1Q53GL0 409 aaPredicted RBP28.92■■■□□ 2.22
PSPC1-204ENST00000492741 WWC1Q8IX03 1113 aa28.92■■■□□ 2.22
PSPC1-204ENST00000492741 CCDC27Q2M243 656 aa28.91■■■□□ 2.22
PSPC1-204ENST00000492741 SLIT2O94813 1529 aa28.91■■■□□ 2.22
PSPC1-204ENST00000492741 AMOTQ4VCS5 1084 aa28.91■■■□□ 2.22
PSPC1-204ENST00000492741 CCDC9Q9Y3X0 531 aaKnown RBP28.91■■■□□ 2.22
PSPC1-204ENST00000492741 UNC5CLQ8IV45 518 aa28.9■■■□□ 2.22
PSPC1-204ENST00000492741 LMOD3Q0VAK6 560 aa28.89■■■□□ 2.22
PSPC1-204ENST00000492741 TRIM35Q9UPQ4 493 aa28.89■■■□□ 2.21
PSPC1-204ENST00000492741 FNBP4Q8N3X1 1017 aaPredicted RBP28.88■■■□□ 2.21
PSPC1-204ENST00000492741 GOLGA2Q08379 1002 aa28.87■■■□□ 2.21
PSPC1-204ENST00000492741 PDE3BQ13370 1112 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms