RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SLC12A5Q9H2X9 1139 aa24.41■■□□□ 1.5
SGMS1-204ENST00000492601 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
SGMS1-204ENST00000492601 LRRC37A3O60309 1634 aa24.39■■□□□ 1.5
SGMS1-204ENST00000492601 DISP2A7MBM2 1401 aa24.39■■□□□ 1.5
SGMS1-204ENST00000492601 PSDA5PKW4 1024 aaPredicted RBP24.38■■□□□ 1.49
SGMS1-204ENST00000492601 HDGFL2Q7Z4V5 671 aaPredicted RBP24.38■■□□□ 1.49
SGMS1-204ENST00000492601 NME9Q86XW9 330 aa24.38■■□□□ 1.49
SGMS1-204ENST00000492601 SBF2Q86WG5 1849 aa24.38■■□□□ 1.49
SGMS1-204ENST00000492601 WDR17Q8IZU2 1322 aa24.37■■□□□ 1.49
SGMS1-204ENST00000492601 ST20-MTHFSA0A0A6YYL1 179 aa24.37■■□□□ 1.49
SGMS1-204ENST00000492601 EZH2Q15910 746 aaKnown RBP24.37■■□□□ 1.49
SGMS1-204ENST00000492601 APBA3O96018 575 aa24.36■■□□□ 1.49
SGMS1-204ENST00000492601 A0A1W2PP64 1363 aa24.35■■□□□ 1.49
SGMS1-204ENST00000492601 CSB-PGBD3P0DP91 1061 aa24.35■■□□□ 1.49
SGMS1-204ENST00000492601 TESK2Q96S53 571 aa24.35■■□□□ 1.49
SGMS1-204ENST00000492601 PEAK1Q9H792 1746 aa24.35■■□□□ 1.49
SGMS1-204ENST00000492601 USP31Q70CQ4 1352 aa24.34■■□□□ 1.49
SGMS1-204ENST00000492601 TERF2IPQ9NYB0 399 aa24.34■■□□□ 1.49
SGMS1-204ENST00000492601 EDC4Q6P2E9 1401 aaKnown RBP24.34■■□□□ 1.49
SGMS1-204ENST00000492601 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
SGMS1-204ENST00000492601 RREB1Q92766 1687 aa24.33■■□□□ 1.49
SGMS1-204ENST00000492601 DDB1Q16531 1140 aa24.32■■□□□ 1.48
SGMS1-204ENST00000492601 PUS7Q96PZ0 661 aaKnown RBP24.32■■□□□ 1.48
SGMS1-204ENST00000492601 ABCC6O95255 1503 aa24.31■■□□□ 1.48
SGMS1-204ENST00000492601 NUP188Q5SRE5 1749 aa24.3■■□□□ 1.48
SGMS1-204ENST00000492601 OVOS2A0A0G2JMS6 1433 aa24.29■■□□□ 1.48
SGMS1-204ENST00000492601 OVOS2A0A0J9YW53 1432 aa24.29■■□□□ 1.48
SGMS1-204ENST00000492601 OVOS2Q6IE36 1432 aa24.29■■□□□ 1.48
SGMS1-204ENST00000492601 LRP5O75197 1615 aa24.29■■□□□ 1.48
SGMS1-204ENST00000492601 R3HDM1Q15032 1099 aaKnown RBP24.29■■□□□ 1.48
SGMS1-204ENST00000492601 CARD10Q9BWT7 1032 aa24.29■■□□□ 1.48
SGMS1-204ENST00000492601 KAT6BQ8WYB5 2073 aa24.28■■□□□ 1.48
SGMS1-204ENST00000492601 CDCA7Q9BWT1 371 aaPredicted RBP24.26■■□□□ 1.47
SGMS1-204ENST00000492601 PARD3Q8TEW0 1356 aa24.26■■□□□ 1.47
SGMS1-204ENST00000492601 USP47Q96K76 1375 aa24.26■■□□□ 1.47
SGMS1-204ENST00000492601 NINLQ9Y2I6 1382 aa24.26■■□□□ 1.47
SGMS1-204ENST00000492601 C11orf95C9JLR9 678 aaPredicted RBP24.24■■□□□ 1.47
SGMS1-204ENST00000492601 MARCH10Q8NA82 808 aaPredicted RBP24.24■■□□□ 1.47
SGMS1-204ENST00000492601 PCGF6Q9BYE7 350 aa24.24■■□□□ 1.47
SGMS1-204ENST00000492601 SLC24A1O60721 1099 aa24.23■■□□□ 1.47
SGMS1-204ENST00000492601 CCDC7Q96M83 1385 aa24.23■■□□□ 1.47
SGMS1-204ENST00000492601 ERBB3P21860 1342 aa24.22■■□□□ 1.47
SGMS1-204ENST00000492601 NLRP2Q9NX02 1062 aa24.22■■□□□ 1.47
SGMS1-204ENST00000492601 RGPD3A6NKT7 1758 aaPredicted RBP24.21■■□□□ 1.47
SGMS1-204ENST00000492601 RGPD4Q7Z3J3 1758 aa24.21■■□□□ 1.47
SGMS1-204ENST00000492601 EXOC5O00471 708 aa24.2■■□□□ 1.46
SGMS1-204ENST00000492601 TMF1P82094 1093 aa24.2■■□□□ 1.46
SGMS1-204ENST00000492601 ANKRD24Q8TF21 1146 aa24.2■■□□□ 1.46
SGMS1-204ENST00000492601 PTF1AQ7RTS3 328 aa24.19■■□□□ 1.46
SGMS1-204ENST00000492601 RGPD2P0DJD1 1756 aa24.18■■□□□ 1.46
SGMS1-204ENST00000492601 ANKRD36BQ8N2N9 1353 aa24.17■■□□□ 1.46
SGMS1-204ENST00000492601 COG3Q96JB2 828 aa24.17■■□□□ 1.46
SGMS1-204ENST00000492601 TNS2Q63HR2 1409 aa24.17■■□□□ 1.46
SGMS1-204ENST00000492601 KIF20BQ96Q89 1820 aa24.17■■□□□ 1.46
SGMS1-204ENST00000492601 FAM208AQ9UK61 1670 aaKnown RBP24.16■■□□□ 1.46
SGMS1-204ENST00000492601 NBPF14Q5TI25 921 aa24.16■■□□□ 1.46
SGMS1-204ENST00000492601 BCL11BQ9C0K0 894 aaPredicted RBP24.16■■□□□ 1.46
SGMS1-204ENST00000492601 FBLN1P23142 703 aa24.15■■□□□ 1.46
SGMS1-204ENST00000492601 LTV1Q96GA3 475 aaPredicted RBP24.15■■□□□ 1.46
SGMS1-204ENST00000492601 BCL9O00512 1426 aa24.14■■□□□ 1.45
SGMS1-204ENST00000492601 IP6K1Q92551 441 aa24.14■■□□□ 1.45
SGMS1-204ENST00000492601 MYOM1P52179 1685 aa24.13■■□□□ 1.45
SGMS1-204ENST00000492601 PLSCR1O15162 318 aa24.12■■□□□ 1.45
SGMS1-204ENST00000492601 IL2RBP14784 551 aa24.12■■□□□ 1.45
SGMS1-204ENST00000492601 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
SGMS1-204ENST00000492601 NHSQ6T4R5 1651 aa24.11■■□□□ 1.45
SGMS1-204ENST00000492601 MAP3K19Q56UN5 1328 aa24.11■■□□□ 1.45
SGMS1-204ENST00000492601 CLSPNQ9HAW4 1339 aa24.11■■□□□ 1.45
SGMS1-204ENST00000492601 CDCA8Q53HL2 280 aa24.1■■□□□ 1.45
SGMS1-204ENST00000492601 GGNBP2Q9H3C7 697 aa24.1■■□□□ 1.45
SGMS1-204ENST00000492601 FYB1O15117 783 aa24.09■■□□□ 1.45
SGMS1-204ENST00000492601 AMPHP49418 695 aa24.09■■□□□ 1.45
SGMS1-204ENST00000492601 KCNQ2O43526 872 aa24.08■■□□□ 1.45
SGMS1-204ENST00000492601 HOXC9P31274 260 aa24.08■■□□□ 1.45
SGMS1-204ENST00000492601 ACSBG1Q96GR2 724 aa24.08■■□□□ 1.45
SGMS1-204ENST00000492601 BTAF1O14981 1849 aa24.07■■□□□ 1.44
SGMS1-204ENST00000492601 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
SGMS1-204ENST00000492601 PROM2Q8N271 834 aa24.06■■□□□ 1.44
SGMS1-204ENST00000492601 ANO8Q9HCE9 1232 aaPredicted RBP24.04■■□□□ 1.44
SGMS1-204ENST00000492601 TXNRD1Q16881 649 aa24.02■■□□□ 1.44
SGMS1-204ENST00000492601 SHANK3Q9BYB0 1731 aa24.01■■□□□ 1.43
SGMS1-204ENST00000492601 CASZ1Q86V15 1759 aa24.01■■□□□ 1.43
SGMS1-204ENST00000492601 CARD14Q9BXL6 1004 aa24.01■■□□□ 1.43
SGMS1-204ENST00000492601 RTL1A6NKG5 1358 aa24.01■■□□□ 1.43
SGMS1-204ENST00000492601 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
SGMS1-204ENST00000492601 DDX54Q8TDD1 881 aaKnown RBP24■■□□□ 1.43
SGMS1-204ENST00000492601 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
SGMS1-204ENST00000492601 MAP2P11137 1827 aaKnown RBP23.98■■□□□ 1.43
SGMS1-204ENST00000492601 POLR3GLQ9BT43 218 aa23.98■■□□□ 1.43
SGMS1-204ENST00000492601 DOT1LQ8TEK3 1739 aa23.98■■□□□ 1.43
SGMS1-204ENST00000492601 MEGF6O75095 1541 aa23.96■■□□□ 1.43
SGMS1-204ENST00000492601 NBPF6Q5VWK0 638 aa23.96■■□□□ 1.43
SGMS1-204ENST00000492601 USHBP1Q8N6Y0 703 aa23.96■■□□□ 1.43
SGMS1-204ENST00000492601 NBPF4Q96M43 638 aa23.96■■□□□ 1.43
SGMS1-204ENST00000492601 PDGFDQ9GZP0 370 aaPredicted RBP23.96■■□□□ 1.43
SGMS1-204ENST00000492601 SPON1Q9HCB6 807 aa23.96■■□□□ 1.43
SGMS1-204ENST00000492601 STK32BQ9NY57 414 aa23.95■■□□□ 1.42
SGMS1-204ENST00000492601 SMG6Q86US8 1419 aaKnown RBP23.94■■□□□ 1.42
SGMS1-204ENST00000492601 HSP90AB2PQ58FF8 381 aa23.94■■□□□ 1.42
SGMS1-204ENST00000492601 ZCRB1Q8TBF4 217 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms